Click here to switch to the map view.

The map label for this gene is 45659151

Identifier: 45659151

GI number: 45659151

Start: 4088626

End: 4088868

Strand: Reverse

Name: 45659151

Synonym: LIC13332

Alternate gene names: NA

Gene position: 4088868-4088626 (Counterclockwise)

Preceding gene: 45659156

Following gene: 45659150

Centisome position: 95.6

GC content: 37.86

Gene sequence:

>243_bases
TTGTCAAACATGGCCGATAAAAACGATAAGGTAAAGCAGAACGCACCTGGAAAATATTATATCGATAATAGTTGTGTTCC
TTGTAATGACTGTTTAGAAGAAGCTCCTATGCTTCTTAAATATACAGAAGATGAATCTAAAGTTTATTTTCATAGACAAC
CGGCAACTCCCGAAGAAGAAATAGCTGCTAGAAAAGCAATGGAAATTTGTCCTGTCGAAGCCCTCGGAGACGACGGAGAA
TAA

Upstream 100 bases:

>100_bases
TTTTCTGTCCATAAGCTCATAACTTTCGGTGATTATTCTTGAATTAGTATGAATGTCAATTCTGAAAAAGGAGATTGACG
AGACGATTACTCCATAAACT

Downstream 100 bases:

>100_bases
ATTATTATTTCAGATTCGACAAGAATATCAGTTCTTCATCTTTTAAGAATTCCTAATCTTCAATTGTTCCCAAAACTTAA
GAAAATAGAATTAAACCAAA

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MSNMADKNDKVKQNAPGKYYIDNSCVPCNDCLEEAPMLLKYTEDESKVYFHRQPATPEEEIAARKAMEICPVEALGDDGE

Sequences:

>Translated_80_residues
MSNMADKNDKVKQNAPGKYYIDNSCVPCNDCLEEAPMLLKYTEDESKVYFHRQPATPEEEIAARKAMEICPVEALGDDGE
>Mature_79_residues
SNMADKNDKVKQNAPGKYYIDNSCVPCNDCLEEAPMLLKYTEDESKVYFHRQPATPEEEIAARKAMEICPVEALGDDGE

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9000; Mature: 8869

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNMADKNDKVKQNAPGKYYIDNSCVPCNDCLEEAPMLLKYTEDESKVYFHRQPATPEEE
CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCEEEEEECCCCEEEEEECCCCCHHH
IAARKAMEICPVEALGDDGE
HHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SNMADKNDKVKQNAPGKYYIDNSCVPCNDCLEEAPMLLKYTEDESKVYFHRQPATPEEE
CCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCEEEEEECCCCEEEEEECCCCCHHH
IAARKAMEICPVEALGDDGE
HHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA