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The map label for this gene is 45659149

Identifier: 45659149

GI number: 45659149

Start: 4086177

End: 4086587

Strand: Reverse

Name: 45659149

Synonym: LIC13330

Alternate gene names: NA

Gene position: 4086587-4086177 (Counterclockwise)

Preceding gene: 45659150

Following gene: 45659142

Centisome position: 95.54

GC content: 36.5

Gene sequence:

>411_bases
ATGATTTCGAACAATAGTAATATGAATTTTTGGTTGGTGGATGATGATTCCATCTATATTATGATCGCTAGGCGTTTTTT
GGAAAAAGACGGTAGGGTTACAAAACTACGCGATTTCCAAGATGGTGAACTAGCCCTTCAGGAACTTCAAACACTGAGTT
TAGATCAGGAAGAACTTCCAGATGCAATCCTTTTAGATATCAATATGCCTTTTATGGATGGTTGGCAGTTTTTAGACGAG
TTTAAGAAGATTCAAGGGGCTTTGGCTAAAAAAATTACCATTTTTATGGTTAGTTCGTCCGTAGATGAGAGAGATATTGT
AAAGGCAAATTCTTTTCCGGAAGTCAAAGGTTATCTTTCTAAACCTCTTACCCAAGATCACATTCAAAGACTTTATAGCC
AACTTGCTTGA

Upstream 100 bases:

>100_bases
TTTATGACGAAAAATCAAATAGAATCTCTTGGGGGTGAAATAACGGTTGAAAGTTCTCCCGGTAAAGGTACATCTTTCCT
CATTAATTTCAATAAATACA

Downstream 100 bases:

>100_bases
TTTAACATCAGTTTCCAATGGAAAGAATTTTCTAAAAGTTAGCGGCACATTTAGAAAACAAACGAACTTTGTTTTCTTTG
CTATAGATTAACGTAAATTC

Product: response regulator

Products: NA

Alternate protein names: Response Regulator Receiver; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator; Response Regulator; Receiver Component Of A Two-Component Response Regulator; Response Regulator Of Ato Ornithine Decarboxylase Antizyme; Two-Component Response Regulator CheY-Like; Receiver Protein Of A Two-Component Response Regulator; Two Component Response Regulator

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MISNNSNMNFWLVDDDSIYIMIARRFLEKDGRVTKLRDFQDGELALQELQTLSLDQEELPDAILLDINMPFMDGWQFLDE
FKKIQGALAKKITIFMVSSSVDERDIVKANSFPEVKGYLSKPLTQDHIQRLYSQLA

Sequences:

>Translated_136_residues
MISNNSNMNFWLVDDDSIYIMIARRFLEKDGRVTKLRDFQDGELALQELQTLSLDQEELPDAILLDINMPFMDGWQFLDE
FKKIQGALAKKITIFMVSSSVDERDIVKANSFPEVKGYLSKPLTQDHIQRLYSQLA
>Mature_136_residues
MISNNSNMNFWLVDDDSIYIMIARRFLEKDGRVTKLRDFQDGELALQELQTLSLDQEELPDAILLDINMPFMDGWQFLDE
FKKIQGALAKKITIFMVSSSVDERDIVKANSFPEVKGYLSKPLTQDHIQRLYSQLA

Specific function: Unknown

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15764; Mature: 15764

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNNSNMNFWLVDDDSIYIMIARRFLEKDGRVTKLRDFQDGELALQELQTLSLDQEELP
CCCCCCCCEEEEEECCCEEHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCHHHCC
DAILLDINMPFMDGWQFLDEFKKIQGALAKKITIFMVSSSVDERDIVKANSFPEVKGYLS
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHCCCCCCHHHHHHC
KPLTQDHIQRLYSQLA
CCCCHHHHHHHHHHCC
>Mature Secondary Structure
MISNNSNMNFWLVDDDSIYIMIARRFLEKDGRVTKLRDFQDGELALQELQTLSLDQEELP
CCCCCCCCEEEEEECCCEEHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCHHHCC
DAILLDINMPFMDGWQFLDEFKKIQGALAKKITIFMVSSSVDERDIVKANSFPEVKGYLS
CEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHCCCCCCHHHHHHC
KPLTQDHIQRLYSQLA
CCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA