Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_005823 |
Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is 45659132
Identifier: 45659132
GI number: 45659132
Start: 4060543
End: 4061646
Strand: Reverse
Name: 45659132
Synonym: LIC13313
Alternate gene names: NA
Gene position: 4061646-4060543 (Counterclockwise)
Preceding gene: 45659133
Following gene: 45659131
Centisome position: 94.96
GC content: 35.87
Gene sequence:
>1104_bases TTGAAACGTTGGCTTGTTTTATTTTTCGCGTTAGTCGCACTTGTGCTCAGTTTTTTCTTTTTAGAAGAAAAAAAAGAGGA ACGTTCGGAGGTTTCCTTTTGGGAGATTGATATAGACGAAATTGAATACCAACCGCCTACGAATTTTTGGGACGGGGAAG TTTCTATTTTTTATAAATCTTCTATTTTTCTTAAAAAAAGAAAGGGTATTAGTGAAAGTGGAAACTTTCTTACGATCGAA TCCAAAGACTTAGAAACTGGAGATACGATTGTATTTGAAGGTGGGTATAATTCTGAAAACATTTTCAGAGAACTTTCGGT TTTAAAAGTAAAAGGAGTGGAACCGATTCAAGGAGAGAAGATTTCCACCTCACTACAATTAAACGAAAATTCCCCAAAGA TTTATTTAAAATCTTCTGGTAAGATCCTGAAAACAATTTGGATCGGAAAAAAGAAAACTGGAGATTCAACCAGAATTGTA AAAGAAGGAAACGAAATTTTAATCATCCAGGCAAATACTATAGATCGTTTTACAAGAGGAATTGGAGAATTTAGACAAAA ACAACTCATCAATTTAAAAGACGAGTCCGTCGTTGAAACGATTTGGGAAGAAGAGGGAAAAACCATTCGTCTGGATAATC ACCCGTTTAAAGAAAAAACGATAAAGAAAAATTTTTGGAGAAGACTTTCCGGTAAACTTATAACTTTGGAACAAACCTTA GGAGATTCTTGGAACAACCAAGTTGTAGGTCAACTTGTAGAATTGTATCCGGACGATCCGAATGGGGCGGGTTATGCGAT TGCTAAACGTTTGACAGCGGTTCCTGCAGACGCCTCATTAAAAATTCGAATCTCCAATGGGGATTGGATCACGTTACGTT ATTATCCGAAAACGAATATCAATTCAATCGATTATAGACCTGCAATTCGAATCGTAAATGATAAATTTTCAGAACCTCCT TTTTATATTCGAGAAGATAGTTTCTTGCGATTAAAAGAAGTTGTGGGGAATTTGGAGAAAGCGGAACAGAAAAAAGAACC CGTAAATCAGAACGACCAGAACGGGCTTCCTAAAAATCTAACCCCAAAAAATGATCGCAGATAA
Upstream 100 bases:
>100_bases GAGTCGTTTGGATTTTAGGAATGTTTATTTTTCCAGGATTGATCGCGTTTGTTTCTGCGGCGATGCTTATTCAAAAGCGT AGAAAAGAAGGACAAGAATC
Downstream 100 bases:
>100_bases AGAACAGGATTTCTCAGACGTAAGAACCGAACTGATTCAAAAAGTTTTTCAGTTTCCTGGAGATGCTTTTGATCTTTATC AGAAGATAGAAGGCTTCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MKRWLVLFFALVALVLSFFFLEEKKEERSEVSFWEIDIDEIEYQPPTNFWDGEVSIFYKSSIFLKKRKGISESGNFLTIE SKDLETGDTIVFEGGYNSENIFRELSVLKVKGVEPIQGEKISTSLQLNENSPKIYLKSSGKILKTIWIGKKKTGDSTRIV KEGNEILIIQANTIDRFTRGIGEFRQKQLINLKDESVVETIWEEEGKTIRLDNHPFKEKTIKKNFWRRLSGKLITLEQTL GDSWNNQVVGQLVELYPDDPNGAGYAIAKRLTAVPADASLKIRISNGDWITLRYYPKTNINSIDYRPAIRIVNDKFSEPP FYIREDSFLRLKEVVGNLEKAEQKKEPVNQNDQNGLPKNLTPKNDRR
Sequences:
>Translated_367_residues MKRWLVLFFALVALVLSFFFLEEKKEERSEVSFWEIDIDEIEYQPPTNFWDGEVSIFYKSSIFLKKRKGISESGNFLTIE SKDLETGDTIVFEGGYNSENIFRELSVLKVKGVEPIQGEKISTSLQLNENSPKIYLKSSGKILKTIWIGKKKTGDSTRIV KEGNEILIIQANTIDRFTRGIGEFRQKQLINLKDESVVETIWEEEGKTIRLDNHPFKEKTIKKNFWRRLSGKLITLEQTL GDSWNNQVVGQLVELYPDDPNGAGYAIAKRLTAVPADASLKIRISNGDWITLRYYPKTNINSIDYRPAIRIVNDKFSEPP FYIREDSFLRLKEVVGNLEKAEQKKEPVNQNDQNGLPKNLTPKNDRR >Mature_367_residues MKRWLVLFFALVALVLSFFFLEEKKEERSEVSFWEIDIDEIEYQPPTNFWDGEVSIFYKSSIFLKKRKGISESGNFLTIE SKDLETGDTIVFEGGYNSENIFRELSVLKVKGVEPIQGEKISTSLQLNENSPKIYLKSSGKILKTIWIGKKKTGDSTRIV KEGNEILIIQANTIDRFTRGIGEFRQKQLINLKDESVVETIWEEEGKTIRLDNHPFKEKTIKKNFWRRLSGKLITLEQTL GDSWNNQVVGQLVELYPDDPNGAGYAIAKRLTAVPADASLKIRISNGDWITLRYYPKTNINSIDYRPAIRIVNDKFSEPP FYIREDSFLRLKEVVGNLEKAEQKKEPVNQNDQNGLPKNLTPKNDRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42379; Mature: 42379
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRWLVLFFALVALVLSFFFLEEKKEERSEVSFWEIDIDEIEYQPPTNFWDGEVSIFYKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCCCCEEEEEEEC SIFLKKRKGISESGNFLTIESKDLETGDTIVFEGGYNSENIFRELSVLKVKGVEPIQGEK EEEEEHHCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHEEECCCCCCCCCE ISTSLQLNENSPKIYLKSSGKILKTIWIGKKKTGDSTRIVKEGNEILIIQANTIDRFTRG EEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEECCCEEEEEECCCHHHHHHH IGEFRQKQLINLKDESVVETIWEEEGKTIRLDNHPFKEKTIKKNFWRRLSGKLITLEQTL HHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEHHH GDSWNNQVVGQLVELYPDDPNGAGYAIAKRLTAVPADASLKIRISNGDWITLRYYPKTNI CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCC NSIDYRPAIRIVNDKFSEPPFYIREDSFLRLKEVVGNLEKAEQKKEPVNQNDQNGLPKNL CCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC TPKNDRR CCCCCCC >Mature Secondary Structure MKRWLVLFFALVALVLSFFFLEEKKEERSEVSFWEIDIDEIEYQPPTNFWDGEVSIFYKS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCCCCCEEEEEEEC SIFLKKRKGISESGNFLTIESKDLETGDTIVFEGGYNSENIFRELSVLKVKGVEPIQGEK EEEEEHHCCCCCCCCEEEEECCCCCCCCEEEEECCCCHHHHHHHHHHEEECCCCCCCCCE ISTSLQLNENSPKIYLKSSGKILKTIWIGKKKTGDSTRIVKEGNEILIIQANTIDRFTRG EEEEEEECCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEECCCEEEEEECCCHHHHHHH IGEFRQKQLINLKDESVVETIWEEEGKTIRLDNHPFKEKTIKKNFWRRLSGKLITLEQTL HHHHHHHHHCCCCHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEHHH GDSWNNQVVGQLVELYPDDPNGAGYAIAKRLTAVPADASLKIRISNGDWITLRYYPKTNI CCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEEEEEECCCCC NSIDYRPAIRIVNDKFSEPPFYIREDSFLRLKEVVGNLEKAEQKKEPVNQNDQNGLPKNL CCCCCCCEEEEECCCCCCCCEEEECCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCC TPKNDRR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA