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The map label for this gene is 45659112

Identifier: 45659112

GI number: 45659112

Start: 4035142

End: 4035654

Strand: Reverse

Name: 45659112

Synonym: LIC13291

Alternate gene names: NA

Gene position: 4035654-4035142 (Counterclockwise)

Preceding gene: 45659117

Following gene: 45659111

Centisome position: 94.35

GC content: 37.23

Gene sequence:

>513_bases
ATGAAACTTTTAAGTTCGATTCTAAATAAGTTTAGAAAAAACTTTTGTAAAAAAGATAACATAAAGTATATCCATTTTGT
TTTCGGGACGAGTTTATTTTTTACGATGTGTGCTTTTCCGCAAGAAAGATCCGTTTCTTACCATCCTACAGACTACGTTT
ATAAGGATGACTTACAAGGTCTGCAAAATTGTCTTCGTTTGGGAAGGGGAGTCGATCAAAGAGATCCGTTTTTTAAAAAT
TACACCCCTCTTATGATCGCAGCAAAGGAAGGAGAATACTTAATTTCGGAATATTTAATTAGACACGGAGCAGACGTAAA
TGCAAGAACAAGAGACGGGCATACAGCGTTGATGATGGCTACTTTTAACCGTTATCCGGAGATTGTAAAGCGTTCGGGTG
CGGATGTGCATACAATGACCTTACAAGGTCATACGGCTTGGTCTGAATCTACATTAGAAGATCGTAAAATTATTCAAGAA
CTTCTTATTAAAGCCGGTGCAGGTACGAAATGA

Upstream 100 bases:

>100_bases
CAGTAAAATTGTTTCTGAGTAGTTTCCGCAACTACTGTTTACACCTATTGTATTGAATTTGGAAGTTGATACAATAAACG
GATGTTGAAGGAAGAATATA

Downstream 100 bases:

>100_bases
TGAAATACACACGTTATTTTTTACCGATAATTTTCGTATTTTTTTTAGAGTATTGTAAGATCGATACTTCCGGCTGTGAA
AAGAATTGTGAGGCTCAATT

Product: ankyrin domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKLLSSILNKFRKNFCKKDNIKYIHFVFGTSLFFTMCAFPQERSVSYHPTDYVYKDDLQGLQNCLRLGRGVDQRDPFFKN
YTPLMIAAKEGEYLISEYLIRHGADVNARTRDGHTALMMATFNRYPEIVKRSGADVHTMTLQGHTAWSESTLEDRKIIQE
LLIKAGAGTK

Sequences:

>Translated_170_residues
MKLLSSILNKFRKNFCKKDNIKYIHFVFGTSLFFTMCAFPQERSVSYHPTDYVYKDDLQGLQNCLRLGRGVDQRDPFFKN
YTPLMIAAKEGEYLISEYLIRHGADVNARTRDGHTALMMATFNRYPEIVKRSGADVHTMTLQGHTAWSESTLEDRKIIQE
LLIKAGAGTK
>Mature_170_residues
MKLLSSILNKFRKNFCKKDNIKYIHFVFGTSLFFTMCAFPQERSVSYHPTDYVYKDDLQGLQNCLRLGRGVDQRDPFFKN
YTPLMIAAKEGEYLISEYLIRHGADVNARTRDGHTALMMATFNRYPEIVKRSGADVHTMTLQGHTAWSESTLEDRKIIQE
LLIKAGAGTK

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19565; Mature: 19565

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLSSILNKFRKNFCKKDNIKYIHFVFGTSLFFTMCAFPQERSVSYHPTDYVYKDDLQG
CHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
LQNCLRLGRGVDQRDPFFKNYTPLMIAAKEGEYLISEYLIRHGADVNARTRDGHTALMMA
HHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEHHHH
TFNRYPEIVKRSGADVHTMTLQGHTAWSESTLEDRKIIQELLIKAGAGTK
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLLSSILNKFRKNFCKKDNIKYIHFVFGTSLFFTMCAFPQERSVSYHPTDYVYKDDLQG
CHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH
LQNCLRLGRGVDQRDPFFKNYTPLMIAAKEGEYLISEYLIRHGADVNARTRDGHTALMMA
HHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCEEHHHH
TFNRYPEIVKRSGADVHTMTLQGHTAWSESTLEDRKIIQELLIKAGAGTK
HHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA