Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45659026
Identifier: 45659026
GI number: 45659026
Start: 3931020
End: 3932033
Strand: Reverse
Name: 45659026
Synonym: LIC13204
Alternate gene names: NA
Gene position: 3932033-3931020 (Counterclockwise)
Preceding gene: 45659028
Following gene: 45659025
Centisome position: 91.93
GC content: 38.07
Gene sequence:
>1014_bases ATGTCTTGGAAGAAGTTGGTTTTATACGTTTCGATTTTCTCCATTCTACTATGTCACGGTTTAAATGCGTATCAAGAGGA TGGACATTTTTATACGGTTCAAACCGTTTTAAATAATTTTCAGACTTCTTCTCCTCTTACCAAAGAAGAAACTGCACTTG TCGCTTTTTGCACTCAGCTTCCGGATGAAGTTCCCGAGTTGGATGCGATTTCAGTATATCAAAAGTTTGCTCTCAAATAT CCTTTGGATTATACTCGTTGGGTTTTTACAGATCAGGGTTCTTCTGAAATTTTAGGCAGAATGGCTGAAGTACAACAGTT GTTACACGGTCTAACCGGCGGGAATAGCGAACATCTACGAAATGTTGCCATTGTAACGTTGGATCGACTACGCACTGAAC TTACTTCTAAAAATGAAAAGTCCCCCGAAAAATTATGCGCATTAGGTTTTGCTTTTCATCTTTTGGGAGATTCATTCGCA CATCGTAAATTACTGAATTCTAAAAAGATGTATCCTACGGGTAGGGGACATGCTTCGGATATGACCTTGCCGGATCATCC AGTTTACAACGATGATAGAGTTTTAGAATGGGAGAAATATGCAAAAGGGATTCCTAGTTTATTTCGTTCCGATTTAAAGG AAATTGTAATTAAAGATGACTTTCAAAAAGCCAGAAAACTTACCGGAAACAACTATCCTTGGCATTGTATTTTCGGAAGA AAATGCGAAGACAGGTTAAGAAGAATTCTTTTGCATCGATTGAGGGAGTCTGATTCTTTTCCAAGATACAATCCGATACA GAAAGACCGTTATCCGGCTGTCAACTGTCAAGAATACGTTCAAAGAGTAGTGGAACAAAAAGATATTCCTTTTACTCCCG ATTGTGGTAAGTCTTGGAAAATTTATAAACAAGTTTCTTTGGACGTTTGGAAACGCCTCGGTTACTTTCAAGACGAAAAC TCCCGTAAACAAATCCAACTCTATGATGGAGATGACTTATGGCAAAATCTTTAA
Upstream 100 bases:
>100_bases TATTTGATTTCAAAACTTCTTTTAAAAAATATCTAGAAAGTCATCTGAAATCGAAACAATTGTTGCAATTGTTGTTAAAA AAAGTATTCATTGTCGATCT
Downstream 100 bases:
>100_bases GTAAAGTAGACGAAGAAGAACATCCTCGTAAAAAAAGAAAAAGAAAAGTAAAAAAGAAATCTGTTTTGGGAGAAATACTA ATCGTATTTGCAGGATTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MSWKKLVLYVSIFSILLCHGLNAYQEDGHFYTVQTVLNNFQTSSPLTKEETALVAFCTQLPDEVPELDAISVYQKFALKY PLDYTRWVFTDQGSSEILGRMAEVQQLLHGLTGGNSEHLRNVAIVTLDRLRTELTSKNEKSPEKLCALGFAFHLLGDSFA HRKLLNSKKMYPTGRGHASDMTLPDHPVYNDDRVLEWEKYAKGIPSLFRSDLKEIVIKDDFQKARKLTGNNYPWHCIFGR KCEDRLRRILLHRLRESDSFPRYNPIQKDRYPAVNCQEYVQRVVEQKDIPFTPDCGKSWKIYKQVSLDVWKRLGYFQDEN SRKQIQLYDGDDLWQNL
Sequences:
>Translated_337_residues MSWKKLVLYVSIFSILLCHGLNAYQEDGHFYTVQTVLNNFQTSSPLTKEETALVAFCTQLPDEVPELDAISVYQKFALKY PLDYTRWVFTDQGSSEILGRMAEVQQLLHGLTGGNSEHLRNVAIVTLDRLRTELTSKNEKSPEKLCALGFAFHLLGDSFA HRKLLNSKKMYPTGRGHASDMTLPDHPVYNDDRVLEWEKYAKGIPSLFRSDLKEIVIKDDFQKARKLTGNNYPWHCIFGR KCEDRLRRILLHRLRESDSFPRYNPIQKDRYPAVNCQEYVQRVVEQKDIPFTPDCGKSWKIYKQVSLDVWKRLGYFQDEN SRKQIQLYDGDDLWQNL >Mature_336_residues SWKKLVLYVSIFSILLCHGLNAYQEDGHFYTVQTVLNNFQTSSPLTKEETALVAFCTQLPDEVPELDAISVYQKFALKYP LDYTRWVFTDQGSSEILGRMAEVQQLLHGLTGGNSEHLRNVAIVTLDRLRTELTSKNEKSPEKLCALGFAFHLLGDSFAH RKLLNSKKMYPTGRGHASDMTLPDHPVYNDDRVLEWEKYAKGIPSLFRSDLKEIVIKDDFQKARKLTGNNYPWHCIFGRK CEDRLRRILLHRLRESDSFPRYNPIQKDRYPAVNCQEYVQRVVEQKDIPFTPDCGKSWKIYKQVSLDVWKRLGYFQDENS RKQIQLYDGDDLWQNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39323; Mature: 39192
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWKKLVLYVSIFSILLCHGLNAYQEDGHFYTVQTVLNNFQTSSPLTKEETALVAFCTQL CCHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHC PDEVPELDAISVYQKFALKYPLDYTRWVFTDQGSSEILGRMAEVQQLLHGLTGGNSEHLR CCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHH NVAIVTLDRLRTELTSKNEKSPEKLCALGFAFHLLGDSFAHRKLLNSKKMYPTGRGHASD HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCC MTLPDHPVYNDDRVLEWEKYAKGIPSLFRSDLKEIVIKDDFQKARKLTGNNYPWHCIFGR CCCCCCCCCCCCCEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC KCEDRLRRILLHRLRESDSFPRYNPIQKDRYPAVNCQEYVQRVVEQKDIPFTPDCGKSWK CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH IYKQVSLDVWKRLGYFQDENSRKQIQLYDGDDLWQNL HHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHCC >Mature Secondary Structure SWKKLVLYVSIFSILLCHGLNAYQEDGHFYTVQTVLNNFQTSSPLTKEETALVAFCTQL CHHHHHHHHHHHHHHHHHCCCCHHCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHC PDEVPELDAISVYQKFALKYPLDYTRWVFTDQGSSEILGRMAEVQQLLHGLTGGNSEHLR CCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCHHHHH NVAIVTLDRLRTELTSKNEKSPEKLCALGFAFHLLGDSFAHRKLLNSKKMYPTGRGHASD HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCC MTLPDHPVYNDDRVLEWEKYAKGIPSLFRSDLKEIVIKDDFQKARKLTGNNYPWHCIFGR CCCCCCCCCCCCCEECHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC KCEDRLRRILLHRLRESDSFPRYNPIQKDRYPAVNCQEYVQRVVEQKDIPFTPDCGKSWK CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH IYKQVSLDVWKRLGYFQDENSRKQIQLYDGDDLWQNL HHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA