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The map label for this gene is rsgA

Identifier: 45659015

GI number: 45659015

Start: 3910317

End: 3911396

Strand: Reverse

Name: rsgA

Synonym: LIC13193

Alternate gene names: 45659015

Gene position: 3911396-3910317 (Counterclockwise)

Preceding gene: 45659019

Following gene: 45659014

Centisome position: 91.45

GC content: 37.78

Gene sequence:

>1080_bases
ATGTCACAACCAAATTCAATCCTAATGTCTTATGGTTGGGATCCGAGCATTTATTTAGAAGAACCGAAACTTCTTGAAGG
TTTAAAACCTGGACGTGTACTTGCTGTTTACGGAGAATATTCAAAAATTATAATAGAACAGGGCGAAAAGAAAGGTATTT
TTTCTGGTGCTCTGATGGCTTCTGGGGAATCAATTGTAACTGGAGATTGGGTACTCATACGAGAAATTGAAGGAGATGAA
CTTTGTATCGTAGAAAAAATTCTTCCCCGAAAAACTTTTCTAAGAAGAAGTAATCCAGGAAAAAGAAAAGGTTCCCAGGC
GATTGCGTCAAACATAGATCTTTTATTAGTGATTATGGGTTTAGATAACGATTATAGTCCGAGAAGAATAGAACGTTATT
TGTTCTTGGCCAAGGTTAGTGGGGCACAAGTCACGATCGTTTTAAATAAAAAGGATCTTTGTATGGATCCTGAAAATAAA
TTTATGGAAATTAAAATGATCGCTGGAGAAACACCGATCGAAATGATTTCAGCTTTGGATCTAAAACAGACTCGAACAAT
TTTGCAATGGATCGATCCGGGAAAAACGATCGCATTTTTAGGATCTTCGGGCGCGGGTAAATCTACTATCATTAATTCTT
TATTAGGTGGAGAGATTCAAAAAACCAATGAGGTAAAAGTTTCCGATGGAACCGGAAAACATACTACAACTCGCAGAGAA
CTGTTTCTTTTACCTTCGGGTGGGGTTCTTATGGACAATCCGGGAATCAGAGAAGTAGGTTTGTTTTCAGAAGGAAGCGA
AGACGAACTTGAGGAAGTGTTTCCGGAAATTGCAGTGGCTGCGGAAGAATGTCGTTTTAACGATTGTTCTCATAATGAAG
AACCCAATTGCGGAGTTGTAGCGGCCGTAAAAGATGGAAGAATCAGTGAAGCTAGATACTTTTCTTATTTAAAACTTTCG
AAAGAATTAATGGCTTATCAGGCCTTGAACGATCCGGAAGAAGCGAGAAAGAAAAAACAAAAAGATAAACAAATGTCCAA
AGCTTTACAAAAGAGACTTAAGGATAAGGGTAGAAAATAG

Upstream 100 bases:

>100_bases
TTTGGATTCAAAGTTCGAAAGGTTGATGAATAAAATTTATATAGTTGTTTAATTTTATTTTAAAAATCTAAATTTTCAGA
ATCTAAAAAGAGGAAAAAAT

Downstream 100 bases:

>100_bases
TAGCTTTTACAGATTACGTCACTTCGTGTTTAGGAATTTTTTTATTAAATAATAGATTTGTTAAAAAATTCCATAGTGGC
CGATTAACAAAACTGCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 359; Mature: 358

Protein sequence:

>359_residues
MSQPNSILMSYGWDPSIYLEEPKLLEGLKPGRVLAVYGEYSKIIIEQGEKKGIFSGALMASGESIVTGDWVLIREIEGDE
LCIVEKILPRKTFLRRSNPGKRKGSQAIASNIDLLLVIMGLDNDYSPRRIERYLFLAKVSGAQVTIVLNKKDLCMDPENK
FMEIKMIAGETPIEMISALDLKQTRTILQWIDPGKTIAFLGSSGAGKSTIINSLLGGEIQKTNEVKVSDGTGKHTTTRRE
LFLLPSGGVLMDNPGIREVGLFSEGSEDELEEVFPEIAVAAEECRFNDCSHNEEPNCGVVAAVKDGRISEARYFSYLKLS
KELMAYQALNDPEEARKKKQKDKQMSKALQKRLKDKGRK

Sequences:

>Translated_359_residues
MSQPNSILMSYGWDPSIYLEEPKLLEGLKPGRVLAVYGEYSKIIIEQGEKKGIFSGALMASGESIVTGDWVLIREIEGDE
LCIVEKILPRKTFLRRSNPGKRKGSQAIASNIDLLLVIMGLDNDYSPRRIERYLFLAKVSGAQVTIVLNKKDLCMDPENK
FMEIKMIAGETPIEMISALDLKQTRTILQWIDPGKTIAFLGSSGAGKSTIINSLLGGEIQKTNEVKVSDGTGKHTTTRRE
LFLLPSGGVLMDNPGIREVGLFSEGSEDELEEVFPEIAVAAEECRFNDCSHNEEPNCGVVAAVKDGRISEARYFSYLKLS
KELMAYQALNDPEEARKKKQKDKQMSKALQKRLKDKGRK
>Mature_358_residues
SQPNSILMSYGWDPSIYLEEPKLLEGLKPGRVLAVYGEYSKIIIEQGEKKGIFSGALMASGESIVTGDWVLIREIEGDEL
CIVEKILPRKTFLRRSNPGKRKGSQAIASNIDLLLVIMGLDNDYSPRRIERYLFLAKVSGAQVTIVLNKKDLCMDPENKF
MEIKMIAGETPIEMISALDLKQTRTILQWIDPGKTIAFLGSSGAGKSTIINSLLGGEIQKTNEVKVSDGTGKHTTTRREL
FLLPSGGVLMDNPGIREVGLFSEGSEDELEEVFPEIAVAAEECRFNDCSHNEEPNCGVVAAVKDGRISEARYFSYLKLSK
ELMAYQALNDPEEARKKKQKDKQMSKALQKRLKDKGRK

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain

Homologues:

Organism=Escherichia coli, GI87082381, Length=300, Percent_Identity=30.6666666666667, Blast_Score=127, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSGA_LEPIC (Q72MK0)

Other databases:

- EMBL:   AE016823
- RefSeq:   YP_003101.1
- ProteinModelPortal:   Q72MK0
- SMR:   Q72MK0
- GeneID:   2769624
- GenomeReviews:   AE016823_GR
- KEGG:   lic:LIC13193
- NMPDR:   fig|267671.1.peg.3101
- HOGENOM:   HBG652450
- OMA:   FPAVGDW
- BioCyc:   LINT267671:LIC_13193-MONOMER
- HAMAP:   MF_01820
- InterPro:   IPR010914
- InterPro:   IPR016027
- InterPro:   IPR004881

Pfam domain/function: PF03193 DUF258; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 39939; Mature: 39807

Theoretical pI: Translated: 7.25; Mature: 7.25

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPNSILMSYGWDPSIYLEEPKLLEGLKPGRVLAVYGEYSKIIIEQGEKKGIFSGALMA
CCCCCCEEEEECCCCCEEECCCHHHCCCCCCCEEEEECCCEEEEEECCCCCCCEECHHHC
SGESIVTGDWVLIREIEGDELCIVEKILPRKTFLRRSNPGKRKGSQAIASNIDLLLVIMG
CCCEEEECCEEEEEECCCCCEEEHHHHCCHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEE
LDNDYSPRRIERYLFLAKVSGAQVTIVLNKKDLCMDPENKFMEIKMIAGETPIEMISALD
CCCCCCHHHHHHEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
LKQTRTILQWIDPGKTIAFLGSSGAGKSTIINSLLGGEIQKTNEVKVSDGTGKHTTTRRE
HHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEE
LFLLPSGGVLMDNPGIREVGLFSEGSEDELEEVFPEIAVAAEECRFNDCSHNEEPNCGVV
EEEECCCCEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
AAVKDGRISEARYFSYLKLSKELMAYQALNDPEEARKKKQKDKQMSKALQKRLKDKGRK
EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SQPNSILMSYGWDPSIYLEEPKLLEGLKPGRVLAVYGEYSKIIIEQGEKKGIFSGALMA
CCCCCEEEEECCCCCEEECCCHHHCCCCCCCEEEEECCCEEEEEECCCCCCCEECHHHC
SGESIVTGDWVLIREIEGDELCIVEKILPRKTFLRRSNPGKRKGSQAIASNIDLLLVIMG
CCCEEEECCEEEEEECCCCCEEEHHHHCCHHHHHHCCCCCCCCCHHHHHCCCCEEEEEEE
LDNDYSPRRIERYLFLAKVSGAQVTIVLNKKDLCMDPENKFMEIKMIAGETPIEMISALD
CCCCCCHHHHHHEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEEEECCCCHHHHHHHHH
LKQTRTILQWIDPGKTIAFLGSSGAGKSTIINSLLGGEIQKTNEVKVSDGTGKHTTTRRE
HHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCEE
LFLLPSGGVLMDNPGIREVGLFSEGSEDELEEVFPEIAVAAEECRFNDCSHNEEPNCGVV
EEEECCCCEEECCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEE
AAVKDGRISEARYFSYLKLSKELMAYQALNDPEEARKKKQKDKQMSKALQKRLKDKGRK
EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA