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The map label for this gene is 45659012

Identifier: 45659012

GI number: 45659012

Start: 3904276

End: 3905562

Strand: Reverse

Name: 45659012

Synonym: LIC13190

Alternate gene names: NA

Gene position: 3905562-3904276 (Counterclockwise)

Preceding gene: 45659014

Following gene: 45659011

Centisome position: 91.31

GC content: 37.92

Gene sequence:

>1287_bases
ATGGAAAGAAAAGATAGAATACCTTACAAACCTACACAACCAAGTATGAATCTAAGTAAACTGTTGATTCGATTTGCAAA
AGATACTTCGGTGGGAACCTTGGAAACGGTCCGGTCCGTTTTGAGTGAATCTTTAGATTGGTCGTCTAAACGGTTATCCG
AACTTTCGGGTACACCTTTGGTTCAGAATACGAGTCTGGCTGAATTCTTTTTCAAATCCGGAGAAGTCCTGAAAAATGCA
GGTGAAAAAACGGAACAGGGGTTGACGGATGCTTTGATTTCTACTTCAAATGCAATGCAGATAGCGTTAGACGCTCTTGA
AAATGCTGATGAAGTTGTTAAAAGAACTCTTTTTGAGAATATTCCAGTTTCTAGTATCGTAGGCGAATCTTTTGCGGGAG
TTGTAACTACTTCTCAGGTTCAAGCTTCTTTTAGACTCAAAGGTAAAGATGCAGAATATCAAGAAATTCTAATGGATTGG
AAAAATTCAAAATTACCTTATGTGATTTTATGTATTCCAGGTCTTTTTTGTGACGAAGGGCTTTGGAATACAAATGGAGA
AATTCCACTTTCAGAAACGATGAAAGAATGCGGTTATTATCCCGTTTATCTTCGATTTAATCCCGGAATTCATCTTTCTA
CAAATGCAAAAAAAATGTTGGATCTTGTGGAGAATCTTCTAAATTCCCCAGAGTTGGAAAATAGAACGTTAGACGTTATA
TCTTATAGTCAAGGAGGTTTGATTTTCAGAAGCGCATTATATCAGTCTAAACAGAATGGTTCCCAGTTTTCAAAAAGGAT
TCGTCATGCGCTTGTGATTAATTCTCCCGATGGAGGATCGTATATCGAAAAGATTGGTTTTTGGTTAGGACTTGGAGCGG
AATCGTTGCCGATTCTTCCGGTTCATATTTTGGGTTTTATCGGAAATCAGAGAAGCGACGCAATCAAAGATCTTTCTCAT
GGAATCATACGTGAAGAGGATTGGATTCAGAACGATCAGATGAAAAGATATTTAAACGATTTGTATTTTGGGGAGCTTGA
CGACGTAAATGCGACTCAAATTTACAGTTTGGTAACAAAAACGGAATCCAAATGGTCTTCTTGGATTGGAGACGGAATTG
TGGAAAAGCCGAGCCTTACTTTGTTAAGTGATAAAGTGTACCGAAAAAAATCCAATCCGGAATCGCGGGTTCATTGTTTA
TTTGAAACTTCTCATTATCAGGTTATGGCACATCCACAGACGAGTAGGATTCTCCGAGGAACATTAAACGATCGAATAAA
TTTTTGA

Upstream 100 bases:

>100_bases
TAGAAACAGAAGGAATTACAAGATCAAGCCTCTTCGTTTTGTTTTAAGTCTAAGAATTGAATTTGACCTAAAGTAAATTT
TAAGTTATACTTCGCGCGCG

Downstream 100 bases:

>100_bases
TTATAAAAGTTCTTTTGTAAACTATTCGTCTCTTTTGATTTATGCCAAGCTGAAACGATATTGATTACTCGGGCACATAC
AAATAATATTATGAGTTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: PGAP1-Like; PGAP1-Like Protein; Pgap1 Family Protein

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MERKDRIPYKPTQPSMNLSKLLIRFAKDTSVGTLETVRSVLSESLDWSSKRLSELSGTPLVQNTSLAEFFFKSGEVLKNA
GEKTEQGLTDALISTSNAMQIALDALENADEVVKRTLFENIPVSSIVGESFAGVVTTSQVQASFRLKGKDAEYQEILMDW
KNSKLPYVILCIPGLFCDEGLWNTNGEIPLSETMKECGYYPVYLRFNPGIHLSTNAKKMLDLVENLLNSPELENRTLDVI
SYSQGGLIFRSALYQSKQNGSQFSKRIRHALVINSPDGGSYIEKIGFWLGLGAESLPILPVHILGFIGNQRSDAIKDLSH
GIIREEDWIQNDQMKRYLNDLYFGELDDVNATQIYSLVTKTESKWSSWIGDGIVEKPSLTLLSDKVYRKKSNPESRVHCL
FETSHYQVMAHPQTSRILRGTLNDRINF

Sequences:

>Translated_428_residues
MERKDRIPYKPTQPSMNLSKLLIRFAKDTSVGTLETVRSVLSESLDWSSKRLSELSGTPLVQNTSLAEFFFKSGEVLKNA
GEKTEQGLTDALISTSNAMQIALDALENADEVVKRTLFENIPVSSIVGESFAGVVTTSQVQASFRLKGKDAEYQEILMDW
KNSKLPYVILCIPGLFCDEGLWNTNGEIPLSETMKECGYYPVYLRFNPGIHLSTNAKKMLDLVENLLNSPELENRTLDVI
SYSQGGLIFRSALYQSKQNGSQFSKRIRHALVINSPDGGSYIEKIGFWLGLGAESLPILPVHILGFIGNQRSDAIKDLSH
GIIREEDWIQNDQMKRYLNDLYFGELDDVNATQIYSLVTKTESKWSSWIGDGIVEKPSLTLLSDKVYRKKSNPESRVHCL
FETSHYQVMAHPQTSRILRGTLNDRINF
>Mature_428_residues
MERKDRIPYKPTQPSMNLSKLLIRFAKDTSVGTLETVRSVLSESLDWSSKRLSELSGTPLVQNTSLAEFFFKSGEVLKNA
GEKTEQGLTDALISTSNAMQIALDALENADEVVKRTLFENIPVSSIVGESFAGVVTTSQVQASFRLKGKDAEYQEILMDW
KNSKLPYVILCIPGLFCDEGLWNTNGEIPLSETMKECGYYPVYLRFNPGIHLSTNAKKMLDLVENLLNSPELENRTLDVI
SYSQGGLIFRSALYQSKQNGSQFSKRIRHALVINSPDGGSYIEKIGFWLGLGAESLPILPVHILGFIGNQRSDAIKDLSH
GIIREEDWIQNDQMKRYLNDLYFGELDDVNATQIYSLVTKTESKWSSWIGDGIVEKPSLTLLSDKVYRKKSNPESRVHCL
FETSHYQVMAHPQTSRILRGTLNDRINF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48179; Mature: 48179

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERKDRIPYKPTQPSMNLSKLLIRFAKDTSVGTLETVRSVLSESLDWSSKRLSELSGTPL
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCC
VQNTSLAEFFFKSGEVLKNAGEKTEQGLTDALISTSNAMQIALDALENADEVVKRTLFEN
CCCCHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHC
IPVSSIVGESFAGVVTTSQVQASFRLKGKDAEYQEILMDWKNSKLPYVILCIPGLFCDEG
CCHHHHHCCHHHCCEEHHHHHEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCHHHCCC
LWNTNGEIPLSETMKECGYYPVYLRFNPGIHLSTNAKKMLDLVENLLNSPELENRTLDVI
CCCCCCCCCHHHHHHHCCCCEEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCEEEEE
SYSQGGLIFRSALYQSKQNGSQFSKRIRHALVINSPDGGSYIEKIGFWLGLGAESLPILP
EECCCCHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCCCHH
VHILGFIGNQRSDAIKDLSHGIIREEDWIQNDQMKRYLNDLYFGELDDVNATQIYSLVTK
HHHHHHHCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TESKWSSWIGDGIVEKPSLTLLSDKVYRKKSNPESRVHCLFETSHYQVMAHPQTSRILRG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCHHHHHHH
TLNDRINF
HHHHCCCC
>Mature Secondary Structure
MERKDRIPYKPTQPSMNLSKLLIRFAKDTSVGTLETVRSVLSESLDWSSKRLSELSGTPL
CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCC
VQNTSLAEFFFKSGEVLKNAGEKTEQGLTDALISTSNAMQIALDALENADEVVKRTLFEN
CCCCHHHHHHHHCCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHC
IPVSSIVGESFAGVVTTSQVQASFRLKGKDAEYQEILMDWKNSKLPYVILCIPGLFCDEG
CCHHHHHCCHHHCCEEHHHHHEEEEECCCCCHHHHHHHHCCCCCCCEEEEECCCHHHCCC
LWNTNGEIPLSETMKECGYYPVYLRFNPGIHLSTNAKKMLDLVENLLNSPELENRTLDVI
CCCCCCCCCHHHHHHHCCCCEEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCEEEEE
SYSQGGLIFRSALYQSKQNGSQFSKRIRHALVINSPDGGSYIEKIGFWLGLGAESLPILP
EECCCCHHHHHHHHHHHCCHHHHHHHHHHEEEEECCCCCHHHHHHHHHHCCCCCCCCCHH
VHILGFIGNQRSDAIKDLSHGIIREEDWIQNDQMKRYLNDLYFGELDDVNATQIYSLVTK
HHHHHHHCCCHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
TESKWSSWIGDGIVEKPSLTLLSDKVYRKKSNPESRVHCLFETSHYQVMAHPQTSRILRG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEECCCHHHHHHH
TLNDRINF
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA