Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45659010
Identifier: 45659010
GI number: 45659010
Start: 3902915
End: 3903130
Strand: Reverse
Name: 45659010
Synonym: LIC13188
Alternate gene names: NA
Gene position: 3903130-3902915 (Counterclockwise)
Preceding gene: 45659011
Following gene: 45659009
Centisome position: 91.25
GC content: 35.19
Gene sequence:
>216_bases ATGTCTGAAGAAAATTTTTTAAATCCGGCAGTCGCTATAAAACTCTGTCAGCGTTGTGGGCAGACTTTTGGTTGTGGCGC CGCTTTTTATTCCTGCGAATGTTTTTCTATAAGTTTGTCGTCTGAGATTCGAAATCAAATCAAAGAAAATTACAAAGACT GTCTTTGTGTTCCTTGTTTGAAAGAATTAGAAAAGTCTAAAAAAGGGAATTTGTAA
Upstream 100 bases:
>100_bases TCGTATTGCCCAAAAATTATATGAATCTATAGGTTTTGTAAAAGACGAAGAATTTATTTATTATACTTGGGTTGTGTAGT ATATTTTAATTTTATAATAT
Downstream 100 bases:
>100_bases TAACTCACGTTTTATAAAACATTCATTTGTAAATCTTTGAAAGTTTTTAAAAGTAAACTTTCATTTTTATCGTCTAACAG TGTAAAAGGAGCCTATTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSEENFLNPAVAIKLCQRCGQTFGCGAAFYSCECFSISLSSEIRNQIKENYKDCLCVPCLKELEKSKKGNL
Sequences:
>Translated_71_residues MSEENFLNPAVAIKLCQRCGQTFGCGAAFYSCECFSISLSSEIRNQIKENYKDCLCVPCLKELEKSKKGNL >Mature_70_residues SEENFLNPAVAIKLCQRCGQTFGCGAAFYSCECFSISLSSEIRNQIKENYKDCLCVPCLKELEKSKKGNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7933; Mature: 7802
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
11.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 12.7 %Cys+Met (Translated Protein) 11.4 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 11.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEENFLNPAVAIKLCQRCGQTFGCGAAFYSCECFSISLSSEIRNQIKENYKDCLCVPCL CCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHH KELEKSKKGNL HHHHHHCCCCC >Mature Secondary Structure SEENFLNPAVAIKLCQRCGQTFGCGAAFYSCECFSISLSSEIRNQIKENYKDCLCVPCL CCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHH KELEKSKKGNL HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA