Click here to switch to the map view.

The map label for this gene is 45658530

Identifier: 45658530

GI number: 45658530

Start: 3280095

End: 3281420

Strand: Reverse

Name: 45658530

Synonym: LIC12695

Alternate gene names: NA

Gene position: 3281420-3280095 (Counterclockwise)

Preceding gene: 45658531

Following gene: 45658529

Centisome position: 76.72

GC content: 38.08

Gene sequence:

>1326_bases
ATGTCCGGAAATGATAAAAAGATTCTAGAACAAAATTCTCACGGGGAATTTGAACTAACAGCTTACGGAGAATTCTTAAG
TTATTTCCATACTCATATTCAACTTTTTAACGGTCTTATCTCTGGTAAGAAAATTTCTCCCACAGACCAGGAAGTTCTTA
AACAAAAAGTACGTTCTTATATTGTAAGTAATATCCAAAAGACGGAACAATTTTTTGATCACCTGCCTAAGTTCGCAGAA
TTTCTAGGAATGTCCCAATCTGATCTTTCCGCGTTTATGACGAAAAACTTCATGAACACGCACGCTGGGATCAAAAACAA
ACTCATCGAACAGGAAAAGGCAAACATAGGTAAACCTAAAAAGAAAAGATATTCCCGCATTTCGGAAGAAATTTTGGAAA
CGATCGGAGAATTGGTTCCTCCAGGTAAAAGGTTTATCGGAATGGAAGGTTATGTAGTCCTTAGGGACGATGCGACTGGA
AAAGATCTTGAACCTTCTATTTCTTCTTTCGGCGAAACACCTAAACAAACGAACGAGGAAAATACGCCGGGTGTCGTTAA
AAAAACAGCACCACAAGCTTCTACCCCCGCCGTGCCTTTGAAAAAGCAGACTGAGAAATTGATTCTTACTGAGATCTTGG
AAAAATTTGGTTCTGAATTTTCCGGAAAGGTTTTAGAATTAAAAAAGGAAGAGTTTGAGGAAGCGGAAATAACCAATCAA
ATTGCAGTTGGTGGTAACGAAGAATTGTTAACCGAAGTAGAGGATCTTCAATTTGAAGGTTTCGAAGAGCCTACTTTTTT
AGAAGATACTTCGTTTGAACCGGAAGAGCCACCTGTGAATATTCCGTTTTCTAAATATATGGAAAGTATAAACCGTGTTC
GACAGTTTCAAAAAGACGGTCAACCGGACGCATATAAAAAATGGGTGATGGCTCTTCCTCCGGAACTCAGTGCACTTGTT
CAACTTCATTCTTTTGTTTTAAAGGAAATGAAAAACGAACCTTTGGATTGGAATTCTACTCTTTCCTCGATTTCTTCCCG
AATGGGATTAACGGAGAAAAGACTTTGGAAGGTTTTAGATTTGACCCGTATTTTTGCCGAACTCAGGGCAGGTTTGGAGA
AGGCTTTTGTATCTTCTAAAACTGCTGGTCCAGGAATGGAAGAACTTGTAAAAAAAGCCTGGCCTCATATTCTCAAAATC
TTCGAAGAATACCCAAATACTTCTTCTTTGCACCAAAAGTTAGATCAACTTTTTAGTAAAATTCCGGATGCAACTCTGAG
AAAAAAATTTTCCGATCTATTTCTTCCTCTTCTTCAAAAACTCTGA

Upstream 100 bases:

>100_bases
GAGTCGCTCGAAATGTCTTGAATTCCTGAAAAGTGAGTGAAAACTGTCCAATCAAAGCGTAAGTTCGTCTTGTTGAACTT
AACAAACGCAAATTGATCCT

Downstream 100 bases:

>100_bases
TTTAGTTTTTTATTTCAGTTATAACTATTAGAATACATTCAAAATAGAATCTGATTTTAACTTTGTGAGAGTTCCCACAT
TTTTCAAAGTTTAACTGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MSGNDKKILEQNSHGEFELTAYGEFLSYFHTHIQLFNGLISGKKISPTDQEVLKQKVRSYIVSNIQKTEQFFDHLPKFAE
FLGMSQSDLSAFMTKNFMNTHAGIKNKLIEQEKANIGKPKKKRYSRISEEILETIGELVPPGKRFIGMEGYVVLRDDATG
KDLEPSISSFGETPKQTNEENTPGVVKKTAPQASTPAVPLKKQTEKLILTEILEKFGSEFSGKVLELKKEEFEEAEITNQ
IAVGGNEELLTEVEDLQFEGFEEPTFLEDTSFEPEEPPVNIPFSKYMESINRVRQFQKDGQPDAYKKWVMALPPELSALV
QLHSFVLKEMKNEPLDWNSTLSSISSRMGLTEKRLWKVLDLTRIFAELRAGLEKAFVSSKTAGPGMEELVKKAWPHILKI
FEEYPNTSSLHQKLDQLFSKIPDATLRKKFSDLFLPLLQKL

Sequences:

>Translated_441_residues
MSGNDKKILEQNSHGEFELTAYGEFLSYFHTHIQLFNGLISGKKISPTDQEVLKQKVRSYIVSNIQKTEQFFDHLPKFAE
FLGMSQSDLSAFMTKNFMNTHAGIKNKLIEQEKANIGKPKKKRYSRISEEILETIGELVPPGKRFIGMEGYVVLRDDATG
KDLEPSISSFGETPKQTNEENTPGVVKKTAPQASTPAVPLKKQTEKLILTEILEKFGSEFSGKVLELKKEEFEEAEITNQ
IAVGGNEELLTEVEDLQFEGFEEPTFLEDTSFEPEEPPVNIPFSKYMESINRVRQFQKDGQPDAYKKWVMALPPELSALV
QLHSFVLKEMKNEPLDWNSTLSSISSRMGLTEKRLWKVLDLTRIFAELRAGLEKAFVSSKTAGPGMEELVKKAWPHILKI
FEEYPNTSSLHQKLDQLFSKIPDATLRKKFSDLFLPLLQKL
>Mature_440_residues
SGNDKKILEQNSHGEFELTAYGEFLSYFHTHIQLFNGLISGKKISPTDQEVLKQKVRSYIVSNIQKTEQFFDHLPKFAEF
LGMSQSDLSAFMTKNFMNTHAGIKNKLIEQEKANIGKPKKKRYSRISEEILETIGELVPPGKRFIGMEGYVVLRDDATGK
DLEPSISSFGETPKQTNEENTPGVVKKTAPQASTPAVPLKKQTEKLILTEILEKFGSEFSGKVLELKKEEFEEAEITNQI
AVGGNEELLTEVEDLQFEGFEEPTFLEDTSFEPEEPPVNIPFSKYMESINRVRQFQKDGQPDAYKKWVMALPPELSALVQ
LHSFVLKEMKNEPLDWNSTLSSISSRMGLTEKRLWKVLDLTRIFAELRAGLEKAFVSSKTAGPGMEELVKKAWPHILKIF
EEYPNTSSLHQKLDQLFSKIPDATLRKKFSDLFLPLLQKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50176; Mature: 50045

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGNDKKILEQNSHGEFELTAYGEFLSYFHTHIQLFNGLISGKKISPTDQEVLKQKVRSY
CCCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
IVSNIQKTEQFFDHLPKFAEFLGMSQSDLSAFMTKNFMNTHAGIKNKLIEQEKANIGKPK
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
KKRYSRISEEILETIGELVPPGKRFIGMEGYVVLRDDATGKDLEPSISSFGETPKQTNEE
HHHHHHHHHHHHHHHHHHCCCCHHEECCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCC
NTPGVVKKTAPQASTPAVPLKKQTEKLILTEILEKFGSEFSGKVLELKKEEFEEAEITNQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHH
IAVGGNEELLTEVEDLQFEGFEEPTFLEDTSFEPEEPPVNIPFSKYMESINRVRQFQKDG
HHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
QPDAYKKWVMALPPELSALVQLHSFVLKEMKNEPLDWNSTLSSISSRMGLTEKRLWKVLD
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LTRIFAELRAGLEKAFVSSKTAGPGMEELVKKAWPHILKIFEEYPNTSSLHQKLDQLFSK
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IPDATLRKKFSDLFLPLLQKL
CCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SGNDKKILEQNSHGEFELTAYGEFLSYFHTHIQLFNGLISGKKISPTDQEVLKQKVRSY
CCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
IVSNIQKTEQFFDHLPKFAEFLGMSQSDLSAFMTKNFMNTHAGIKNKLIEQEKANIGKPK
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
KKRYSRISEEILETIGELVPPGKRFIGMEGYVVLRDDATGKDLEPSISSFGETPKQTNEE
HHHHHHHHHHHHHHHHHHCCCCHHEECCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCC
NTPGVVKKTAPQASTPAVPLKKQTEKLILTEILEKFGSEFSGKVLELKKEEFEEAEITNQ
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHH
IAVGGNEELLTEVEDLQFEGFEEPTFLEDTSFEPEEPPVNIPFSKYMESINRVRQFQKDG
HHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
QPDAYKKWVMALPPELSALVQLHSFVLKEMKNEPLDWNSTLSSISSRMGLTEKRLWKVLD
CCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHH
LTRIFAELRAGLEKAFVSSKTAGPGMEELVKKAWPHILKIFEEYPNTSSLHQKLDQLFSK
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IPDATLRKKFSDLFLPLLQKL
CCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA