Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is yyaL [H]
Identifier: 45658527
GI number: 45658527
Start: 3270352
End: 3272502
Strand: Reverse
Name: yyaL [H]
Synonym: LIC12692
Alternate gene names: 45658527
Gene position: 3272502-3270352 (Counterclockwise)
Preceding gene: 45658529
Following gene: 45658523
Centisome position: 76.51
GC content: 37.05
Gene sequence:
>2151_bases ATGGACATGGTTGAATGTAGGAAGTTTTTTAGAAATCGAAAAATAGATTTTATGAGTCTAAAAGAGAACAATTCAATGGA ATCCAATTCCCGTAATCCCAACCGACTTTCAAAAGAGAAAAGTCCTTATTTACAACAACATTCTTATAACCCGGTGGATT GGTTTCCTTGGGGTGAAGAAGCCTTAACCAAAGCAAAAGATCAAGATAAGCTTATTTTTTTATCTATTGGCTATGCTACT TGTCATTGGTGTCACGTAATGGAAAAAGAATCATTTGAGAACCAAAGTATCGCAGATTATCTCAATTTTCATTTTGTATC GATCAAAGTGGATCGAGAAGAAAGACCGGATATAGATCGGATTTATATGGACGCGTTACACGCAATGGAACAGCAAGGAG GTTGGCCGCTGAATATGTTTTTGACGCCTGAAGGACAACCAATTACAGGTGGAACCTATTTTCCTCCGGAATCCAGATAC GGAAGAAAAGGTTTTTTAGAAGTTTTGAATATCATTCAAAAAGTTTGGACAGAAAAACGATCGGAATTAATTGCTGCGGC TTCGGAACTTTCCCAATATCTAAAAGATTCTGGAGAAAGTAGGGCAAAAGAAAAACAAGAAGCCGATTTTCCACCGGAGA ATTGTTTTGATTCCGGATTTTTACTCTATGAAAATTATTATGATTCTCAGTTCGGAGGTTTTAAAACTAATCAAGTTAAT AAGTTTCCTCCTAGTATGGGACTTGGATTTTTACTTCGATATTATCATTCTTCTGGAAATCCAAATGCTTTGGAAATGGT AGAAAACACTCTTCTCGCTATGAAACGAGGTGGAATCTATGATCAAATCGGCGGGGGACTTTGTCGTTATTCTACCGATC CAAGATGGTTGGTTCCTCATTTTGAAAAGATGCTTTATGATAATTCTCTTTTTTTAGAAATTCTGGCGGAGTATTCTTTG GTTTCGAAAAAAATTTCTGCCGAATCTTTTGCACTTGATATAGTTTCTTATCTACATCGGGACATGAGAATGGACGAAGG TGGAATTTGTAGCGCAGAGGACGCGGACTCTGAAGGAGAAGAAGGACTTTTTTATATCTGGGATTTAGAAGAATTTAGAG AAGTTTGTGGAGAGGATTCTTTCCTTTTGGAAAAATTTTGGAACGTTACGAAAGAAGGTAATTTTGAGGGTAAAAATATA CTGCATGAAAATTTTCGTGGCTCCAATTTTACAGAAGAAGAATTAAAACAGTTAGATAAAGCTTTGGCAAAAGGAAAGGT TAAACTTTTGGAAAGAAGGAGTAAAAGAATTCGTCCACTTAGAGACGATAAAATTTTGACTTCTTGGAATGGTCTCTATA TCAAAGCGCTTGTAAAAACTGGAATCGCATTTCAGAGAGAAGACTTTTTAAAACTTGCTGAGGAAACGTATTCTTTTATC GAAAAAAATCTAATCGATTCTAACGGTAGAATCTTGAGAAGATTTCGGGAAGGAGAATCTGGAATATTAGGATATTCGAA TGATTATGCAGAGATGATTGCTTCTTCGATTGTATTGTTCGAGGCGGGTAGAGGAGTTCGTTATTTGCAAAACGCGGTTC TTTGGATGGAAGAAGCGATTCGTTTGTTTCGTTCTCCTGTGGGTGTGTTCTTTGATACCGGAATCGACGGCGAGGTTTTA TTAAGAAGGAGTGTGGACGGTTATGACGGTGTGGAACCGTCTGCGAATAGCTCTCTTGCTCATTCTTTGGTAAGGTTATC TTTTTTGGGAGTAAATTCGAACTATTATCGTGAAATTGCAGAATCGATCTTCTTATATTTTAGAAAAGAATTATATTCTT ATGCTCTTAGCTATCCGTTTTTGCTTTCTGCTTATTGGTCCTATAAACATCATTTTAGGGAAATCGTTTTGATTCGCAAA AATTCAGAAGAGGGTAAAGATATGCTCGCCTGGATTCAGTCTCGGTTTTTACCTGACTCGGTTCTTGCGGTGGTCAACGA AGACGAGTTAGAGGAGGCAAGAAAACTTTCTTCTCTTTTTGATTCCAGGGATAGCGGTGGAAATGCTCTCGTTTATGTTT GTGAGAATTTTTCTTGTAAACTTCCAGTTGATAACGTTTCTGATCTTGAAAAATGTATGCGACTTTCTTAA
Upstream 100 bases:
>100_bases CACTCCAAGTAGGCTGAATCATCGTGAGTAGAATGGTTCCGAAAACGAGAAATTTTTCTAATGTCCTTTTCTTTTTGTAA TACATACAAGTGCCTACTGA
Downstream 100 bases:
>100_bases TTTAACGCAAGTTCGATGGTTAAAAATCTGGGCGAATCCGGCTGTCATAGGCAGCCGGACCGGGCTCTCAGCTCTGGTCA AGTTATTGTAAAATTTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 716; Mature: 716
Protein sequence:
>716_residues MDMVECRKFFRNRKIDFMSLKENNSMESNSRNPNRLSKEKSPYLQQHSYNPVDWFPWGEEALTKAKDQDKLIFLSIGYAT CHWCHVMEKESFENQSIADYLNFHFVSIKVDREERPDIDRIYMDALHAMEQQGGWPLNMFLTPEGQPITGGTYFPPESRY GRKGFLEVLNIIQKVWTEKRSELIAAASELSQYLKDSGESRAKEKQEADFPPENCFDSGFLLYENYYDSQFGGFKTNQVN KFPPSMGLGFLLRYYHSSGNPNALEMVENTLLAMKRGGIYDQIGGGLCRYSTDPRWLVPHFEKMLYDNSLFLEILAEYSL VSKKISAESFALDIVSYLHRDMRMDEGGICSAEDADSEGEEGLFYIWDLEEFREVCGEDSFLLEKFWNVTKEGNFEGKNI LHENFRGSNFTEEELKQLDKALAKGKVKLLERRSKRIRPLRDDKILTSWNGLYIKALVKTGIAFQREDFLKLAEETYSFI EKNLIDSNGRILRRFREGESGILGYSNDYAEMIASSIVLFEAGRGVRYLQNAVLWMEEAIRLFRSPVGVFFDTGIDGEVL LRRSVDGYDGVEPSANSSLAHSLVRLSFLGVNSNYYREIAESIFLYFRKELYSYALSYPFLLSAYWSYKHHFREIVLIRK NSEEGKDMLAWIQSRFLPDSVLAVVNEDELEEARKLSSLFDSRDSGGNALVYVCENFSCKLPVDNVSDLEKCMRLS
Sequences:
>Translated_716_residues MDMVECRKFFRNRKIDFMSLKENNSMESNSRNPNRLSKEKSPYLQQHSYNPVDWFPWGEEALTKAKDQDKLIFLSIGYAT CHWCHVMEKESFENQSIADYLNFHFVSIKVDREERPDIDRIYMDALHAMEQQGGWPLNMFLTPEGQPITGGTYFPPESRY GRKGFLEVLNIIQKVWTEKRSELIAAASELSQYLKDSGESRAKEKQEADFPPENCFDSGFLLYENYYDSQFGGFKTNQVN KFPPSMGLGFLLRYYHSSGNPNALEMVENTLLAMKRGGIYDQIGGGLCRYSTDPRWLVPHFEKMLYDNSLFLEILAEYSL VSKKISAESFALDIVSYLHRDMRMDEGGICSAEDADSEGEEGLFYIWDLEEFREVCGEDSFLLEKFWNVTKEGNFEGKNI LHENFRGSNFTEEELKQLDKALAKGKVKLLERRSKRIRPLRDDKILTSWNGLYIKALVKTGIAFQREDFLKLAEETYSFI EKNLIDSNGRILRRFREGESGILGYSNDYAEMIASSIVLFEAGRGVRYLQNAVLWMEEAIRLFRSPVGVFFDTGIDGEVL LRRSVDGYDGVEPSANSSLAHSLVRLSFLGVNSNYYREIAESIFLYFRKELYSYALSYPFLLSAYWSYKHHFREIVLIRK NSEEGKDMLAWIQSRFLPDSVLAVVNEDELEEARKLSSLFDSRDSGGNALVYVCENFSCKLPVDNVSDLEKCMRLS >Mature_716_residues MDMVECRKFFRNRKIDFMSLKENNSMESNSRNPNRLSKEKSPYLQQHSYNPVDWFPWGEEALTKAKDQDKLIFLSIGYAT CHWCHVMEKESFENQSIADYLNFHFVSIKVDREERPDIDRIYMDALHAMEQQGGWPLNMFLTPEGQPITGGTYFPPESRY GRKGFLEVLNIIQKVWTEKRSELIAAASELSQYLKDSGESRAKEKQEADFPPENCFDSGFLLYENYYDSQFGGFKTNQVN KFPPSMGLGFLLRYYHSSGNPNALEMVENTLLAMKRGGIYDQIGGGLCRYSTDPRWLVPHFEKMLYDNSLFLEILAEYSL VSKKISAESFALDIVSYLHRDMRMDEGGICSAEDADSEGEEGLFYIWDLEEFREVCGEDSFLLEKFWNVTKEGNFEGKNI LHENFRGSNFTEEELKQLDKALAKGKVKLLERRSKRIRPLRDDKILTSWNGLYIKALVKTGIAFQREDFLKLAEETYSFI EKNLIDSNGRILRRFREGESGILGYSNDYAEMIASSIVLFEAGRGVRYLQNAVLWMEEAIRLFRSPVGVFFDTGIDGEVL LRRSVDGYDGVEPSANSSLAHSLVRLSFLGVNSNYYREIAESIFLYFRKELYSYALSYPFLLSAYWSYKHHFREIVLIRK NSEEGKDMLAWIQSRFLPDSVLAVVNEDELEEARKLSSLFDSRDSGGNALVYVCENFSCKLPVDNVSDLEKCMRLS
Specific function: Unknown
COG id: COG1331
COG function: function code O; Highly conserved protein containing a thioredoxin domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To C.elegans B0495.5 [H]
Homologues:
Organism=Homo sapiens, GI31542723, Length=742, Percent_Identity=33.4231805929919, Blast_Score=402, Evalue=1e-112, Organism=Caenorhabditis elegans, GI25147430, Length=720, Percent_Identity=34.1666666666667, Blast_Score=386, Evalue=1e-107, Organism=Drosophila melanogaster, GI20129985, Length=771, Percent_Identity=33.852140077821, Blast_Score=394, Evalue=1e-109,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008928 - InterPro: IPR012341 - InterPro: IPR010819 - InterPro: IPR004879 - InterPro: IPR005198 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF03190 DUF255; PF07221 GlcNAc_2-epim; PF03663 Glyco_hydro_76 [H]
EC number: NA
Molecular weight: Translated: 82805; Mature: 82805
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDMVECRKFFRNRKIDFMSLKENNSMESNSRNPNRLSKEKSPYLQQHSYNPVDWFPWGEE CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCHH ALTKAKDQDKLIFLSIGYATCHWCHVMEKESFENQSIADYLNFHFVSIKVDREERPDIDR HHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHCEEEEEEEECCCCCCCHHH IYMDALHAMEQQGGWPLNMFLTPEGQPITGGTYFPPESRYGRKGFLEVLNIIQKVWTEKR HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SELIAAASELSQYLKDSGESRAKEKQEADFPPENCFDSGFLLYENYYDSQFGGFKTNQVN HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC KFPPSMGLGFLLRYYHSSGNPNALEMVENTLLAMKRGGIYDQIGGGLCRYSTDPRWLVPH CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEECCCCCCEEHHH FEKMLYDNSLFLEILAEYSLVSKKISAESFALDIVSYLHRDMRMDEGGICSAEDADSEGE HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC EGLFYIWDLEEFREVCGEDSFLLEKFWNVTKEGNFEGKNILHENFRGSNFTEEELKQLDK CCEEEEECHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHH ALAKGKVKLLERRSKRIRPLRDDKILTSWNGLYIKALVKTGIAFQREDFLKLAEETYSFI HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EKNLIDSNGRILRRFREGESGILGYSNDYAEMIASSIVLFEAGRGVRYLQNAVLWMEEAI HHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHH RLFRSPVGVFFDTGIDGEVLLRRSVDGYDGVEPSANSSLAHSLVRLSFLGVNSNYYREIA HHHHCCCCEEEECCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH ESIFLYFRKELYSYALSYPFLLSAYWSYKHHFREIVLIRKNSEEGKDMLAWIQSRFLPDS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCHH VLAVVNEDELEEARKLSSLFDSRDSGGNALVYVCENFSCKLPVDNVSDLEKCMRLS HHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHCCC >Mature Secondary Structure MDMVECRKFFRNRKIDFMSLKENNSMESNSRNPNRLSKEKSPYLQQHSYNPVDWFPWGEE CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHCCCCCCHHHHCCCCCCCCCCCCHH ALTKAKDQDKLIFLSIGYATCHWCHVMEKESFENQSIADYLNFHFVSIKVDREERPDIDR HHHCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHCEEEEEEEECCCCCCCHHH IYMDALHAMEQQGGWPLNMFLTPEGQPITGGTYFPPESRYGRKGFLEVLNIIQKVWTEKR HHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SELIAAASELSQYLKDSGESRAKEKQEADFPPENCFDSGFLLYENYYDSQFGGFKTNQVN HHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC KFPPSMGLGFLLRYYHSSGNPNALEMVENTLLAMKRGGIYDQIGGGLCRYSTDPRWLVPH CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCEEECCCCCCEEHHH FEKMLYDNSLFLEILAEYSLVSKKISAESFALDIVSYLHRDMRMDEGGICSAEDADSEGE HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC EGLFYIWDLEEFREVCGEDSFLLEKFWNVTKEGNFEGKNILHENFRGSNFTEEELKQLDK CCEEEEECHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHH ALAKGKVKLLERRSKRIRPLRDDKILTSWNGLYIKALVKTGIAFQREDFLKLAEETYSFI HHHHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH EKNLIDSNGRILRRFREGESGILGYSNDYAEMIASSIVLFEAGRGVRYLQNAVLWMEEAI HHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHH RLFRSPVGVFFDTGIDGEVLLRRSVDGYDGVEPSANSSLAHSLVRLSFLGVNSNYYREIA HHHHCCCCEEEECCCCHHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHH ESIFLYFRKELYSYALSYPFLLSAYWSYKHHFREIVLIRKNSEEGKDMLAWIQSRFLPDS HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHHHHCCCHH VLAVVNEDELEEARKLSSLFDSRDSGGNALVYVCENFSCKLPVDNVSDLEKCMRLS HHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]