| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is arnC [H]
Identifier: 45658028
GI number: 45658028
Start: 2633014
End: 2633961
Strand: Reverse
Name: arnC [H]
Synonym: LIC12179
Alternate gene names: 45658028
Gene position: 2633961-2633014 (Counterclockwise)
Preceding gene: 45658029
Following gene: 45658027
Centisome position: 61.58
GC content: 33.44
Gene sequence:
>948_bases ATGATTGGATTATCTATAGTAATTCCCGTATACAAAGGAGCTAATTCAATTGGTCCGCTCGTAAAAGAATTGTCTAAATT AGAAATTGAGAACGGATTTGAAATCATTTTAGTAAATGATGGCAGCCCAGATAATAGCTATCAAATAATAAAAAGTCTTG TAGAGGAAACTACTTTGCCGATTATTTCTATTGATCTAGCTCGGAATTTTGGAGAGCATAACGCTGTTATGGCTGGGTTA TCTGTTGCTGATGGTGATTATATTATTAATATAGATGATGATTTTCAAAATCCTCCGTCTGAAGTTAAGAAATTATATGA CTATGCAAGAGTAAATTCAGACTTAGATGTTATTTATACTTTTTATGCGAAGAAGAAACATTCGTTCTTTAGAAATCTTG GAAGTAAATTTACAAATTGGGCGGCTAATTTTTTATTAGATAAACCTAAAAATCTTTATCTCTCTAGTTTTCGTTGTATA AATCGTTTTACAAAAGATAATATTGTTTCATATGTCGGTCCTTATCCATATATGGATGGATTGATTTTGCAAACTACACA AAAAATCGGTAGCTTGCTTGTCGAACACAAATCCCGGTTAGGCGGAGAGAGTAATTATACTTTTCGTCGCCTTATTCGTC TCTGGACTGCAATGTTTGTAAATTTTTCCGTGATGCCTCTTCGAATTAGTAGTTTGTTTGGAATCACGACTTGTTTTCTT GGATTCATTATGGCACTTGTAACTGTCATTGAAAGATTTACTGGCGATACACCCGTTGGTTGGACGTCTCTAATGGCTGG GCTACTTATATTTTCTGGTGTTCAACTTTTAATTTTGGGAATGATTGGAGAATATTTAGGTCGTCTTTTTTTAACAGTAA ATGGGCGTCCTCAGTTTGTAATCCGCGAGATAAAACAAAGTAAAAAGAAAACTAAATATAAGAAATGA
Upstream 100 bases:
>100_bases TTTAAAAGTTTTATAAAATTAGAAGAATGTATGATATCCTGGCGTATTTTTTTACCATTCGGCGGATCAGTCTTAGTTCT AGCTAAAAAGGAAAGTTAAT
Downstream 100 bases:
>100_bases TTTTAGGGAACCTTTAAAAAAAACCATATTTTTTAAAAATCTATATTATAGAATTCTTTAGAAGAGTGTTTTGCTTTTAT CCAAATATTAAAACGGAAGT
Product: sugar transferase
Products: NA
Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MIGLSIVIPVYKGANSIGPLVKELSKLEIENGFEIILVNDGSPDNSYQIIKSLVEETTLPIISIDLARNFGEHNAVMAGL SVADGDYIINIDDDFQNPPSEVKKLYDYARVNSDLDVIYTFYAKKKHSFFRNLGSKFTNWAANFLLDKPKNLYLSSFRCI NRFTKDNIVSYVGPYPYMDGLILQTTQKIGSLLVEHKSRLGGESNYTFRRLIRLWTAMFVNFSVMPLRISSLFGITTCFL GFIMALVTVIERFTGDTPVGWTSLMAGLLIFSGVQLLILGMIGEYLGRLFLTVNGRPQFVIREIKQSKKKTKYKK
Sequences:
>Translated_315_residues MIGLSIVIPVYKGANSIGPLVKELSKLEIENGFEIILVNDGSPDNSYQIIKSLVEETTLPIISIDLARNFGEHNAVMAGL SVADGDYIINIDDDFQNPPSEVKKLYDYARVNSDLDVIYTFYAKKKHSFFRNLGSKFTNWAANFLLDKPKNLYLSSFRCI NRFTKDNIVSYVGPYPYMDGLILQTTQKIGSLLVEHKSRLGGESNYTFRRLIRLWTAMFVNFSVMPLRISSLFGITTCFL GFIMALVTVIERFTGDTPVGWTSLMAGLLIFSGVQLLILGMIGEYLGRLFLTVNGRPQFVIREIKQSKKKTKYKK >Mature_315_residues MIGLSIVIPVYKGANSIGPLVKELSKLEIENGFEIILVNDGSPDNSYQIIKSLVEETTLPIISIDLARNFGEHNAVMAGL SVADGDYIINIDDDFQNPPSEVKKLYDYARVNSDLDVIYTFYAKKKHSFFRNLGSKFTNWAANFLLDKPKNLYLSSFRCI NRFTKDNIVSYVGPYPYMDGLILQTTQKIGSLLVEHKSRLGGESNYTFRRLIRLWTAMFVNFSVMPLRISSLFGITTCFL GFIMALVTVIERFTGDTPVGWTSLMAGLLIFSGVQLLILGMIGEYLGRLFLTVNGRPQFVIREIKQSKKKTKYKK
Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1788588, Length=314, Percent_Identity=31.8471337579618, Blast_Score=161, Evalue=6e-41, Organism=Escherichia coli, GI1788692, Length=309, Percent_Identity=26.537216828479, Blast_Score=119, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022857 - InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: =2.7.8.30 [H]
Molecular weight: Translated: 35581; Mature: 35581
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGLSIVIPVYKGANSIGPLVKELSKLEIENGFEIILVNDGSPDNSYQIIKSLVEETTLP CCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC IISIDLARNFGEHNAVMAGLSVADGDYIINIDDDFQNPPSEVKKLYDYARVNSDLDVIYT EEEEHHHHCCCCCHHHEECCEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHH FYAKKKHSFFRNLGSKFTNWAANFLLDKPKNLYLSSFRCINRFTKDNIVSYVGPYPYMDG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC LILQTTQKIGSLLVEHKSRLGGESNYTFRRLIRLWTAMFVNFSVMPLRISSLFGITTCFL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GFIMALVTVIERFTGDTPVGWTSLMAGLLIFSGVQLLILGMIGEYLGRLFLTVNGRPQFV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHH IREIKQSKKKTKYKK HHHHHHHHHHCCCCC >Mature Secondary Structure MIGLSIVIPVYKGANSIGPLVKELSKLEIENGFEIILVNDGSPDNSYQIIKSLVEETTLP CCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCC IISIDLARNFGEHNAVMAGLSVADGDYIINIDDDFQNPPSEVKKLYDYARVNSDLDVIYT EEEEHHHHCCCCCHHHEECCEEECCCEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHH FYAKKKHSFFRNLGSKFTNWAANFLLDKPKNLYLSSFRCINRFTKDNIVSYVGPYPYMDG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC LILQTTQKIGSLLVEHKSRLGGESNYTFRRLIRLWTAMFVNFSVMPLRISSLFGITTCFL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH GFIMALVTVIERFTGDTPVGWTSLMAGLLIFSGVQLLILGMIGEYLGRLFLTVNGRPQFV HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHH IREIKQSKKKTKYKK HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA