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The map label for this gene is epsN [H]

Identifier: 45658024

GI number: 45658024

Start: 2628166

End: 2629329

Strand: Reverse

Name: epsN [H]

Synonym: LIC12175

Alternate gene names: 45658024

Gene position: 2629329-2628166 (Counterclockwise)

Preceding gene: 45658025

Following gene: 45658023

Centisome position: 61.47

GC content: 40.12

Gene sequence:

>1164_bases
ATGTTAAGTGAACAAATTGTATCCGTTTTAAGATCGGTGATCACTGATAAAAATGATGTCGTTCCATTGCATGAGCCGAT
TTTCCAAGGGAACGAGTGGGCCTATGTAAAAGAGTGTTTGGATACAACTTTTGTATCTTCGGTAGGTAAGTTCGTAGATC
GATTTGAGAAAGATCTGGTGGAGTTTACGGGAGCCGGATATGCAGTTGCGGTTACAAATGGAACCGCCGCATTACAGATC
GCTCTTAAACTTGCAGGAGTTCAAGCCCAAGACGAAGTATTAGTTCCTTCCCTAACTTTTATTGCAACCGCAAATGCGGT
TAGTTATTTAGGAGCATTTCCCCACCTTATTGACAGTGAGGAAAATACTTTGGGGGTATCAGCGACTTCTCTCAAGGAGC
ATTTGAATTTTATTGGAGAAATTCGATCAGGGCAGTGTTTTAATAAAAAAACGGGTAATCGAATTAGTGCAATCGTTCCT
ATGCATACCTTTGGCCATCCCGTCGATATCGACGGATTGTTCGCAGTGGCTAAAGATTACCATCTTGTAGTTGTTGAGGA
CGCTGCAGAATCTCTTGGAAGTTATTACCATGGAAAACATACCGGAACGTTCGGCTTATTAGGAACTCTGAGTTTTAATG
GTAATAAAACGATTACTACGGGAGGCGGAGGGGCTATTCTTACAAATGATAGAAATTTAGCTACTCTGGCTAAACATATT
ACGACCACTGCCAAACTTCCTCATGCTTGGGAATACACTCATGATATGATCGGTTATAATTTCAGATTACCGAATATCAA
TGCGGCTCTTGGTTGTGCTCAATTAGAAATGCTACCTCAGTTTTTAACCGCTAAAAGAGCACTTTATGAAAGTTATAAGA
ATGCTTTTTCAGTTGTGAAAAATGCGAAACTACAATCGGAACCGAAAGGCTGCAAGAGTAATTATTGGCTTCAAACTCTA
ATACTAGACTCTTCTGTAATGAACGAAAGAGATTCGATTCTTAAGACAACCAATGATTGCGGTCTTATGACAAGACCAGC
TTGGACTTTACTTCACAAACTGAAGCCATACCAAAGTTGCTTTCGAGCGGAACTTCCCGTAGCTGAATCGTTGGAAAAAA
GGCTTATTAATATTCCAAGTAGTGCGAATATTATTGATGGGTAA

Upstream 100 bases:

>100_bases
GAGGGAGAGATGGTTTTAAAAGAGGCCTCTCTGAAACGATTGATTGGTTTTCTGATATAGATAATCTTTCCTTTTATAAA
ACAGATATTTATAATATATA

Downstream 100 bases:

>100_bases
GAAAGATATTGTTTTAATTGGGGCTGGAGGCCACTCTAAGGCATGCATTGATACGATTGAATACGAAAATAAGTTTCGTA
TTATAGGTTTAATTGGAGTA

Product: aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MLSEQIVSVLRSVITDKNDVVPLHEPIFQGNEWAYVKECLDTTFVSSVGKFVDRFEKDLVEFTGAGYAVAVTNGTAALQI
ALKLAGVQAQDEVLVPSLTFIATANAVSYLGAFPHLIDSEENTLGVSATSLKEHLNFIGEIRSGQCFNKKTGNRISAIVP
MHTFGHPVDIDGLFAVAKDYHLVVVEDAAESLGSYYHGKHTGTFGLLGTLSFNGNKTITTGGGGAILTNDRNLATLAKHI
TTTAKLPHAWEYTHDMIGYNFRLPNINAALGCAQLEMLPQFLTAKRALYESYKNAFSVVKNAKLQSEPKGCKSNYWLQTL
ILDSSVMNERDSILKTTNDCGLMTRPAWTLLHKLKPYQSCFRAELPVAESLEKRLINIPSSANIIDG

Sequences:

>Translated_387_residues
MLSEQIVSVLRSVITDKNDVVPLHEPIFQGNEWAYVKECLDTTFVSSVGKFVDRFEKDLVEFTGAGYAVAVTNGTAALQI
ALKLAGVQAQDEVLVPSLTFIATANAVSYLGAFPHLIDSEENTLGVSATSLKEHLNFIGEIRSGQCFNKKTGNRISAIVP
MHTFGHPVDIDGLFAVAKDYHLVVVEDAAESLGSYYHGKHTGTFGLLGTLSFNGNKTITTGGGGAILTNDRNLATLAKHI
TTTAKLPHAWEYTHDMIGYNFRLPNINAALGCAQLEMLPQFLTAKRALYESYKNAFSVVKNAKLQSEPKGCKSNYWLQTL
ILDSSVMNERDSILKTTNDCGLMTRPAWTLLHKLKPYQSCFRAELPVAESLEKRLINIPSSANIIDG
>Mature_387_residues
MLSEQIVSVLRSVITDKNDVVPLHEPIFQGNEWAYVKECLDTTFVSSVGKFVDRFEKDLVEFTGAGYAVAVTNGTAALQI
ALKLAGVQAQDEVLVPSLTFIATANAVSYLGAFPHLIDSEENTLGVSATSLKEHLNFIGEIRSGQCFNKKTGNRISAIVP
MHTFGHPVDIDGLFAVAKDYHLVVVEDAAESLGSYYHGKHTGTFGLLGTLSFNGNKTITTGGGGAILTNDRNLATLAKHI
TTTAKLPHAWEYTHDMIGYNFRLPNINAALGCAQLEMLPQFLTAKRALYESYKNAFSVVKNAKLQSEPKGCKSNYWLQTL
ILDSSVMNERDSILKTTNDCGLMTRPAWTLLHKLKPYQSCFRAELPVAESLEKRLINIPSSANIIDG

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=377, Percent_Identity=29.1777188328912, Blast_Score=144, Evalue=9e-36,
Organism=Escherichia coli, GI2367285, Length=377, Percent_Identity=27.0557029177719, Blast_Score=132, Evalue=6e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR002129
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42303; Mature: 42303

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSEQIVSVLRSVITDKNDVVPLHEPIFQGNEWAYVKECLDTTFVSSVGKFVDRFEKDLV
CCHHHHHHHHHHHHCCCCCEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFTGAGYAVAVTNGTAALQIALKLAGVQAQDEVLVPSLTFIATANAVSYLGAFPHLIDSE
HHCCCCEEEEEECCCHHEEEEHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHCHHHHCCC
ENTLGVSATSLKEHLNFIGEIRSGQCFNKKTGNRISAIVPMHTFGHPVDIDGLFAVAKDY
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCHHHHCCCCC
HLVVVEDAAESLGSYYHGKHTGTFGLLGTLSFNGNKTITTGGGGAILTNDRNLATLAKHI
EEEEEHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEECCCCEEEECCCHHHHHHHHH
TTTAKLPHAWEYTHDMIGYNFRLPNINAALGCAQLEMLPQFLTAKRALYESYKNAFSVVK
HHHHCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAKLQSEPKGCKSNYWLQTLILDSSVMNERDSILKTTNDCGLMTRPAWTLLHKLKPYQSC
HCCCCCCCCCCCCCCEEEHEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHH
FRAELPVAESLEKRLINIPSSANIIDG
HHCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLSEQIVSVLRSVITDKNDVVPLHEPIFQGNEWAYVKECLDTTFVSSVGKFVDRFEKDLV
CCHHHHHHHHHHHHCCCCCEECCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EFTGAGYAVAVTNGTAALQIALKLAGVQAQDEVLVPSLTFIATANAVSYLGAFPHLIDSE
HHCCCCEEEEEECCCHHEEEEHHHHCCCCCCCEECCCHHHHHHHHHHHHHHHCHHHHCCC
ENTLGVSATSLKEHLNFIGEIRSGQCFNKKTGNRISAIVPMHTFGHPVDIDGLFAVAKDY
CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCHHHHCCCCC
HLVVVEDAAESLGSYYHGKHTGTFGLLGTLSFNGNKTITTGGGGAILTNDRNLATLAKHI
EEEEEHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEEECCCCEEEECCCHHHHHHHHH
TTTAKLPHAWEYTHDMIGYNFRLPNINAALGCAQLEMLPQFLTAKRALYESYKNAFSVVK
HHHHCCCCCHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAKLQSEPKGCKSNYWLQTLILDSSVMNERDSILKTTNDCGLMTRPAWTLLHKLKPYQSC
HCCCCCCCCCCCCCCEEEHEEHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHH
FRAELPVAESLEKRLINIPSSANIIDG
HHCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]