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The map label for this gene is 45657893

Identifier: 45657893

GI number: 45657893

Start: 2464340

End: 2464882

Strand: Reverse

Name: 45657893

Synonym: LIC12044

Alternate gene names: NA

Gene position: 2464882-2464340 (Counterclockwise)

Preceding gene: 45657894

Following gene: 45657892

Centisome position: 57.63

GC content: 35.91

Gene sequence:

>543_bases
GTGTTCGAATCGTTAAACGAAAAATTTGTAAACAGCTATTACAAAAATGTAACGAATTGCAAAACGCATAAAGGCTATAT
AGTTGCAGCTTGCGACGCGACAGGAATAAGCCTACCTAAAACGAAGGAGTTTGTGAAGGATTTTGGCTGTGTAAAAAATC
AACTGGGAGAATCAGAAGCACCGAATGCCAATAGTTCGATTATATTTGATATTTATAATGATATAATATTAAGTTCTACT
ATTGGACCGCATAGAACGGGTAAAAGGTCAATGGCATTGGATCATATCGAGAAACTTAGATCGCTCTCGGTTCTTCAAAA
TAAGAAATTGATTCTTCTTTTCGACAGGGGCTATCCATCGATGGAACTAATCGGAAAGTTAATGGCGAACGGCATCCATT
TTATCATTAGAAGCAATACTCGTTGGCTCAAGAAAGCAAAAATTGCAGGAAAATACAAAAGAGTTGTTGAAAAATCAATT
CTCCATCTGTTTTCTATTTCATGGAAACGGTCGATTGAAGCAGTTTTGTTAATTGAACTATGA

Upstream 100 bases:

>100_bases
AAGCTTAGCGGTCGAGTTATATAGATATTTTAAGAATTTAGGAAAGAAAGCTGTAACGAAATAAGCGTTTTCCTATGCGC
GGGAGAAATTAAATCCGCAA

Downstream 100 bases:

>100_bases
AGTTTTTCAACAATTCTAAAGAATACGACAAAGTTAAAAACATTCTTATCACTAAAAATATACAAAAGAAGAAGGAATGG
CTTAAAGAATATGCGAATAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MFESLNEKFVNSYYKNVTNCKTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESEAPNANSSIIFDIYNDIILSST
IGPHRTGKRSMALDHIEKLRSLSVLQNKKLILLFDRGYPSMELIGKLMANGIHFIIRSNTRWLKKAKIAGKYKRVVEKSI
LHLFSISWKRSIEAVLLIEL

Sequences:

>Translated_180_residues
MFESLNEKFVNSYYKNVTNCKTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESEAPNANSSIIFDIYNDIILSST
IGPHRTGKRSMALDHIEKLRSLSVLQNKKLILLFDRGYPSMELIGKLMANGIHFIIRSNTRWLKKAKIAGKYKRVVEKSI
LHLFSISWKRSIEAVLLIEL
>Mature_180_residues
MFESLNEKFVNSYYKNVTNCKTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESEAPNANSSIIFDIYNDIILSST
IGPHRTGKRSMALDHIEKLRSLSVLQNKKLILLFDRGYPSMELIGKLMANGIHFIIRSNTRWLKKAKIAGKYKRVVEKSI
LHLFSISWKRSIEAVLLIEL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20423; Mature: 20423

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFESLNEKFVNSYYKNVTNCKTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESEA
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PNANSSIIFDIYNDIILSSTIGPHRTGKRSMALDHIEKLRSLSVLQNKKLILLFDRGYPS
CCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
MELIGKLMANGIHFIIRSNTRWLKKAKIAGKYKRVVEKSILHLFSISWKRSIEAVLLIEL
HHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC
>Mature Secondary Structure
MFESLNEKFVNSYYKNVTNCKTHKGYIVAACDATGISLPKTKEFVKDFGCVKNQLGESEA
CCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PNANSSIIFDIYNDIILSSTIGPHRTGKRSMALDHIEKLRSLSVLQNKKLILLFDRGYPS
CCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCC
MELIGKLMANGIHFIIRSNTRWLKKAKIAGKYKRVVEKSILHLFSISWKRSIEAVLLIEL
HHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA