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The map label for this gene is 45657865

Identifier: 45657865

GI number: 45657865

Start: 2422373

End: 2422723

Strand: Reverse

Name: 45657865

Synonym: LIC12012

Alternate gene names: NA

Gene position: 2422723-2422373 (Counterclockwise)

Preceding gene: 45657869

Following gene: 45657864

Centisome position: 56.64

GC content: 36.18

Gene sequence:

>351_bases
ATGATTTTGAACGAAATCATCATTTCTACGGAAAAAATCGATAACGTTCAGGTTATAAAACTTCAAGGTTCTATCAACTC
ATTTACTGAAAAAAAATTCAGAGAACAACTTTCGGTTTCGATTCGTTCCGGTCCGGTAATTTTGGATCTGGAGGAAGTGA
GTTTGATTTCTTCCCGAGGAATTCAGGCATTGAAAGAAATGAATCAATTGAGTTTTACTTCTCGTAATAAATTGGTTTTG
ATCCATCCTACCGAATCAGCTCGAAACTCTATCAAAATGGCGGCGTTAAATGGACTCTTTTTAATCGCCCCGGATGAAGA
ATCCGCTTTAAAAATGACGATGAAAAAATAG

Upstream 100 bases:

>100_bases
AAAAAGGAATAGGACCTTAAAACCAAAAATAGAACGGATAAGAATAGAAAAACCATTTGTCTCAGGGACGAAACACTTAT
AGATTGACTTTCCAAGCATT

Downstream 100 bases:

>100_bases
GTAGGATATAAGTGAAAAATTCGATTCGATTTAACTACGCTCGTAAACTTTGGCATCTTCTTGGATTAATTTTTCCGATC
TGTTATTATCTGGATGTTTT

Product: anti-sigma factor antagonist

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 116

Protein sequence:

>116_residues
MILNEIIISTEKIDNVQVIKLQGSINSFTEKKFREQLSVSIRSGPVILDLEEVSLISSRGIQALKEMNQLSFTSRNKLVL
IHPTESARNSIKMAALNGLFLIAPDEESALKMTMKK

Sequences:

>Translated_116_residues
MILNEIIISTEKIDNVQVIKLQGSINSFTEKKFREQLSVSIRSGPVILDLEEVSLISSRGIQALKEMNQLSFTSRNKLVL
IHPTESARNSIKMAALNGLFLIAPDEESALKMTMKK
>Mature_116_residues
MILNEIIISTEKIDNVQVIKLQGSINSFTEKKFREQLSVSIRSGPVILDLEEVSLISSRGIQALKEMNQLSFTSRNKLVL
IHPTESARNSIKMAALNGLFLIAPDEESALKMTMKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12972; Mature: 12972

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNEIIISTEKIDNVQVIKLQGSINSFTEKKFREQLSVSIRSGPVILDLEEVSLISSRG
CCCHHEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHEEEECCCCEEEEHHHHHHHHHCC
IQALKEMNQLSFTSRNKLVLIHPTESARNSIKMAALNGLFLIAPDEESALKMTMKK
HHHHHHHHHCCCCCCCCEEEEECCCHHHHCEEEEEECCEEEEECCCCCCEEEEECC
>Mature Secondary Structure
MILNEIIISTEKIDNVQVIKLQGSINSFTEKKFREQLSVSIRSGPVILDLEEVSLISSRG
CCCHHEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHEEEECCCCEEEEHHHHHHHHHCC
IQALKEMNQLSFTSRNKLVLIHPTESARNSIKMAALNGLFLIAPDEESALKMTMKK
HHHHHHHHHCCCCCCCCEEEEECCCHHHHCEEEEEECCEEEEECCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA