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The map label for this gene is 45657844

Identifier: 45657844

GI number: 45657844

Start: 2400688

End: 2401224

Strand: Reverse

Name: 45657844

Synonym: LIC11991

Alternate gene names: NA

Gene position: 2401224-2400688 (Counterclockwise)

Preceding gene: 45657848

Following gene: 45657842

Centisome position: 56.14

GC content: 32.96

Gene sequence:

>537_bases
TTGAAGATTCAATTTTTATCTCTTCTTTTTAGTTTCGGTTTATTTGCGGGAATTGGTTGTTCCAAAGATTTAATTCGGTA
TACTCCTGAGCCTGCTCTGGAACAGGTAGTATTCCATTCGGAATCTCTTTGTTACGGATTTCATTTTTTTTGTTCTGAGG
GAGATGCTAAGTCTCTGAATTTTAAAGGCATTTTTAAGAATCTAAGTTTTGAAAAGACGATTTTTTTAGACTACTATCTC
AGTTCTTTCGAGGTCAGTTTTCCAATTGGAGTTTCTTTGAGATTAGATGGAACTTGGTTCAATCTAAGAAAAGTAGGGAC
AGAATATTCGGATTCTGTAAAAATTTCTTCTTCTATTTCGGCGGAGGCCTCAGATAAAATCTTACAAGCAAAAGAAATCA
TATTCAGTTTTTCTTCTAGAGAAAAAACCACAAATCAACTTCTTTCTCACTCAGAAACGGCAAAATTTCAACTTCTCTTA
AAAACTCTTAAGGAGCGATTAAACGCTCAAACAAAATTGAATATTTTAAATCCATAA

Upstream 100 bases:

>100_bases
GGTTGAACTAATTCAAAACAAATGTACGGACTCTAATTGGAATTTTCTTTCAAATCCAAAGCATTTCCAAAAAACTGGGA
AAAATTTTTAGAGGGAACTT

Downstream 100 bases:

>100_bases
TGTTTTTAGTTGAAATAAGAATTAATTTTTGAATTTGTCGTTAGGACAATACAATTTTAATTTGTAACAGTTCTCACATT
TTTAGATTTGATCTTTGATT

Product: outer membrane protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MKIQFLSLLFSFGLFAGIGCSKDLIRYTPEPALEQVVFHSESLCYGFHFFCSEGDAKSLNFKGIFKNLSFEKTIFLDYYL
SSFEVSFPIGVSLRLDGTWFNLRKVGTEYSDSVKISSSISAEASDKILQAKEIIFSFSSREKTTNQLLSHSETAKFQLLL
KTLKERLNAQTKLNILNP

Sequences:

>Translated_178_residues
MKIQFLSLLFSFGLFAGIGCSKDLIRYTPEPALEQVVFHSESLCYGFHFFCSEGDAKSLNFKGIFKNLSFEKTIFLDYYL
SSFEVSFPIGVSLRLDGTWFNLRKVGTEYSDSVKISSSISAEASDKILQAKEIIFSFSSREKTTNQLLSHSETAKFQLLL
KTLKERLNAQTKLNILNP
>Mature_178_residues
MKIQFLSLLFSFGLFAGIGCSKDLIRYTPEPALEQVVFHSESLCYGFHFFCSEGDAKSLNFKGIFKNLSFEKTIFLDYYL
SSFEVSFPIGVSLRLDGTWFNLRKVGTEYSDSVKISSSISAEASDKILQAKEIIFSFSSREKTTNQLLSHSETAKFQLLL
KTLKERLNAQTKLNILNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20171; Mature: 20171

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIQFLSLLFSFGLFAGIGCSKDLIRYTPEPALEQVVFHSESLCYGFHFFCSEGDAKSLN
CCHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
FKGIFKNLSFEKTIFLDYYLSSFEVSFPIGVSLRLDGTWFNLRKVGTEYSDSVKISSSIS
HHHHHCCCCCCCEEEEEEHHHHEEEECCCEEEEEECCCEEEHHHCCCCCCCCEEECCCCC
AEASDKILQAKEIIFSFSSREKTTNQLLSHSETAKFQLLLKTLKERLNAQTKLNILNP
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure
MKIQFLSLLFSFGLFAGIGCSKDLIRYTPEPALEQVVFHSESLCYGFHFFCSEGDAKSLN
CCHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCCC
FKGIFKNLSFEKTIFLDYYLSSFEVSFPIGVSLRLDGTWFNLRKVGTEYSDSVKISSSIS
HHHHHCCCCCCCEEEEEEHHHHEEEECCCEEEEEECCCEEEHHHCCCCCCCCEEECCCCC
AEASDKILQAKEIIFSFSSREKTTNQLLSHSETAKFQLLLKTLKERLNAQTKLNILNP
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA