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The map label for this gene is 45657841

Identifier: 45657841

GI number: 45657841

Start: 2394704

End: 2395441

Strand: Reverse

Name: 45657841

Synonym: LIC11988

Alternate gene names: NA

Gene position: 2395441-2394704 (Counterclockwise)

Preceding gene: 45657842

Following gene: 45657840

Centisome position: 56.01

GC content: 35.64

Gene sequence:

>738_bases
ATGGAAAAAATCCGGCTAGGAGTTTACGCATTTGGAATTGTTATAGTCGGAATTTTAGTTTTTACACTTTCTAAAAGTTG
GTTCATTTTAGACAGAGGAGTTGAGTTAGTCGAACCTGGTTCTTCTAAAGAAGAACCTTTGACTCCTGCAGATAGAAGTG
GAGATTTACTCAATCATTCTGTGGTTCTTTGGGAACGTTATCTTTTTTATCCATTTGAACTTTCCAGAGAAACTGTAGCA
GGTCATAGAAAAACTCTGAATCACGCAAGAAATTTGACCGTAGTCGATTTGGAATCAGGAAATCCGCGTAAACTATTTCA
TAGAAACGTTTATATTTGGGATTATTTTACTGGTACAGATGTTGTAGGTAATACTACGGAAGAATCAGAATTGGATTCCG
TTTTGGCATCCGGGATTTCCACCGGAAAAAATCTAATCTTGATTGGAATGACTGAGGACACAAATAAGGACGGATTTTTA
AATCAAAAAGATAGAAAGCAGGTTTTTGTCTACAATCCTGTGAGTGCAAATCTTGTAGGTGTTCTACCGAAAAAATATTC
TTTGGAAAAATTTCTTACATCTCCCGGAAAAGAAAGATTGGTGATGATTGTTTCTTTGGAAGAAGAAAAAGAAGAATCTA
AAAAGAAAAAATCTGCGGCCACGGTAAAACTACCAGAAATCACATTCTATATTTATGATATTCGAAAAGGAAGAGGAACA
CTTGTAGAACGTCCTTGA

Upstream 100 bases:

>100_bases
ATATCTTCTTATCTGATTGTACCTGAACGTTCTTATGCTTTGGAGAGAAAATAGTCTATTTTTTCATTGACCTGATCTTT
TCCCGGGCTTTTTTCTACTC

Downstream 100 bases:

>100_bases
AAATTATATTTATTAGAGTTATTGAAAGATTAATTTTCTTATGTTTTTTCATTAAAACGAATGGAAAAATTGTTTATAGA
TAGATATGGAATTTTTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MEKIRLGVYAFGIVIVGILVFTLSKSWFILDRGVELVEPGSSKEEPLTPADRSGDLLNHSVVLWERYLFYPFELSRETVA
GHRKTLNHARNLTVVDLESGNPRKLFHRNVYIWDYFTGTDVVGNTTEESELDSVLASGISTGKNLILIGMTEDTNKDGFL
NQKDRKQVFVYNPVSANLVGVLPKKYSLEKFLTSPGKERLVMIVSLEEEKEESKKKKSAATVKLPEITFYIYDIRKGRGT
LVERP

Sequences:

>Translated_245_residues
MEKIRLGVYAFGIVIVGILVFTLSKSWFILDRGVELVEPGSSKEEPLTPADRSGDLLNHSVVLWERYLFYPFELSRETVA
GHRKTLNHARNLTVVDLESGNPRKLFHRNVYIWDYFTGTDVVGNTTEESELDSVLASGISTGKNLILIGMTEDTNKDGFL
NQKDRKQVFVYNPVSANLVGVLPKKYSLEKFLTSPGKERLVMIVSLEEEKEESKKKKSAATVKLPEITFYIYDIRKGRGT
LVERP
>Mature_245_residues
MEKIRLGVYAFGIVIVGILVFTLSKSWFILDRGVELVEPGSSKEEPLTPADRSGDLLNHSVVLWERYLFYPFELSRETVA
GHRKTLNHARNLTVVDLESGNPRKLFHRNVYIWDYFTGTDVVGNTTEESELDSVLASGISTGKNLILIGMTEDTNKDGFL
NQKDRKQVFVYNPVSANLVGVLPKKYSLEKFLTSPGKERLVMIVSLEEEKEESKKKKSAATVKLPEITFYIYDIRKGRGT
LVERP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27745; Mature: 27745

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIRLGVYAFGIVIVGILVFTLSKSWFILDRGVELVEPGSSKEEPLTPADRSGDLLNHS
CCCEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCHHHHH
VVLWERYLFYPFELSRETVAGHRKTLNHARNLTVVDLESGNPRKLFHRNVYIWDYFTGTD
HEEEHHHEECEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECEEEEEEEECCCC
VVGNTTEESELDSVLASGISTGKNLILIGMTEDTNKDGFLNQKDRKQVFVYNPVSANLVG
CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEE
VLPKKYSLEKFLTSPGKERLVMIVSLEEEKEESKKKKSAATVKLPEITFYIYDIRKGRGT
ECCCCCCHHHHHCCCCCCEEEEEEEECHHHHHHHHHHCCCEEECCEEEEEEEEEECCCCC
LVERP
CCCCC
>Mature Secondary Structure
MEKIRLGVYAFGIVIVGILVFTLSKSWFILDRGVELVEPGSSKEEPLTPADRSGDLLNHS
CCCEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCCCCCCCCCCCCHHHHH
VVLWERYLFYPFELSRETVAGHRKTLNHARNLTVVDLESGNPRKLFHRNVYIWDYFTGTD
HEEEHHHEECEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCEEEECEEEEEEEECCCC
VVGNTTEESELDSVLASGISTGKNLILIGMTEDTNKDGFLNQKDRKQVFVYNPVSANLVG
CCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCEEE
VLPKKYSLEKFLTSPGKERLVMIVSLEEEKEESKKKKSAATVKLPEITFYIYDIRKGRGT
ECCCCCCHHHHHCCCCCCEEEEEEEECHHHHHHHHHHCCCEEECCEEEEEEEEEECCCCC
LVERP
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA