Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_005823 |
Length | 4,277,185 |
Click here to switch to the map view.
The map label for this gene is yheT [H]
Identifier: 45657808
GI number: 45657808
Start: 2357928
End: 2358938
Strand: Reverse
Name: yheT [H]
Synonym: LIC11949
Alternate gene names: 45657808
Gene position: 2358938-2357928 (Counterclockwise)
Preceding gene: 45657809
Following gene: 45657807
Centisome position: 55.15
GC content: 37.49
Gene sequence:
>1011_bases ATGAGTTCAGAAGCCTTTAAACCGAAACGATTCGTTCAAGGCAAACACCTTCAGACTGTTTATAATACTTTTTTTCCTCC TAAAAATTATCTTAGGAGCAAATATTATTTCGAAGATATTCTTCTACAATTAGGGGATGGTTCTGGAGATTCTCTTTGGT TAGAACACAATCCTCCTATTTCTCAGTATTCTTCCGGTCCGTCTTGGAACGGAATTTATATAGTAATGATTCACGGAATG GAAGGAACCTCGGACAGTTCTTATCTAGTCAGTTTGGCACAGAATGCTTTACTTCGCGGATACGGATGTATTCGAATGAA TCTTAGAAACTGCGGTAGAGGCCAGGGATTTTCTAAAGGAACGTATAACATCGGTCAGACGAATGACGTTCAGGATGTGA TCGATTTTGTATGGAAAAAACTTTCTCATAGAATTTTTCTTTCCGGGTTTTCTCTTTCCGCAAGTTTAGTTTTAAAATAT TTAGGTGAAAGGAGGAATCATAAAGTGGAAGCGTTTTCCTCTACCAACCCTCCTTTGGATTTATTTAAAGGTTGTGAGTT TATCGATTCGAAAGAAGGAAAGTTTTATAGGGATCGATTTGTGTCTGGTTTTCGTAAAAAAATCAAAAACAAAATCATTC AACTTCCTCCTGAGTTAGAAAAAAATGCGTTTCAAACCAAAACGTTTTATGAATTTGATGATCGTGTAACGGCACCTTTT TTCGGTTATAAAGACGCGAAAGAATATTATATGGATTGTTCTTGCGTTCGTTATATCCCGGATATTCGTCATTCTGGAAT TATAATTCATTCGGAGGATGATCCTGTGGTTCCTCCTTTTGATTGGGAAAAGATAGAATGGAACAGACTTCCTCATATAC GAACGATTCTCAGCCCTAAAGGAGGCCACGTCGGATTTCTGACGAACCCGACTCCGGAAATTCCAGACGGAAGATGGTTG AATAAAATAATTCTGGATTATTTCGATTTGAAAGTAGATTCTGGAAACTGA
Upstream 100 bases:
>100_bases ATAAATTCGCCAAAAAAAGTCCCTATATCAAAAAAGAACAATTGGAAGACTGGGACGAATTTTTTAAAGAACTCTAATAT TCTATAAAACGCATATTATA
Downstream 100 bases:
>100_bases TCTTTATCCGATGAATTCCTCTAAAAAGAATCCTATCACAAAGGAAAAACTCAATCGCCCTCCGGGTGCGGCCTTTTTTA TTGTGGTTACTTTTGAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSSEAFKPKRFVQGKHLQTVYNTFFPPKNYLRSKYYFEDILLQLGDGSGDSLWLEHNPPISQYSSGPSWNGIYIVMIHGM EGTSDSSYLVSLAQNALLRGYGCIRMNLRNCGRGQGFSKGTYNIGQTNDVQDVIDFVWKKLSHRIFLSGFSLSASLVLKY LGERRNHKVEAFSSTNPPLDLFKGCEFIDSKEGKFYRDRFVSGFRKKIKNKIIQLPPELEKNAFQTKTFYEFDDRVTAPF FGYKDAKEYYMDCSCVRYIPDIRHSGIIIHSEDDPVVPPFDWEKIEWNRLPHIRTILSPKGGHVGFLTNPTPEIPDGRWL NKIILDYFDLKVDSGN
Sequences:
>Translated_336_residues MSSEAFKPKRFVQGKHLQTVYNTFFPPKNYLRSKYYFEDILLQLGDGSGDSLWLEHNPPISQYSSGPSWNGIYIVMIHGM EGTSDSSYLVSLAQNALLRGYGCIRMNLRNCGRGQGFSKGTYNIGQTNDVQDVIDFVWKKLSHRIFLSGFSLSASLVLKY LGERRNHKVEAFSSTNPPLDLFKGCEFIDSKEGKFYRDRFVSGFRKKIKNKIIQLPPELEKNAFQTKTFYEFDDRVTAPF FGYKDAKEYYMDCSCVRYIPDIRHSGIIIHSEDDPVVPPFDWEKIEWNRLPHIRTILSPKGGHVGFLTNPTPEIPDGRWL NKIILDYFDLKVDSGN >Mature_335_residues SSEAFKPKRFVQGKHLQTVYNTFFPPKNYLRSKYYFEDILLQLGDGSGDSLWLEHNPPISQYSSGPSWNGIYIVMIHGME GTSDSSYLVSLAQNALLRGYGCIRMNLRNCGRGQGFSKGTYNIGQTNDVQDVIDFVWKKLSHRIFLSGFSLSASLVLKYL GERRNHKVEAFSSTNPPLDLFKGCEFIDSKEGKFYRDRFVSGFRKKIKNKIIQLPPELEKNAFQTKTFYEFDDRVTAPFF GYKDAKEYYMDCSCVRYIPDIRHSGIIIHSEDDPVVPPFDWEKIEWNRLPHIRTILSPKGGHVGFLTNPTPEIPDGRWLN KIILDYFDLKVDSGN
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI194578891, Length=317, Percent_Identity=22.7129337539432, Blast_Score=89, Evalue=6e-18, Organism=Homo sapiens, GI23397659, Length=351, Percent_Identity=21.3675213675214, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI23397661, Length=351, Percent_Identity=21.3675213675214, Blast_Score=76, Evalue=3e-14, Organism=Escherichia coli, GI1789752, Length=341, Percent_Identity=26.6862170087977, Blast_Score=105, Evalue=4e-24, Organism=Caenorhabditis elegans, GI17566110, Length=265, Percent_Identity=23.0188679245283, Blast_Score=72, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6323866, Length=250, Percent_Identity=30.8, Blast_Score=117, Evalue=4e-27, Organism=Saccharomyces cerevisiae, GI6325162, Length=284, Percent_Identity=23.2394366197183, Blast_Score=73, Evalue=6e-14, Organism=Drosophila melanogaster, GI24652003, Length=325, Percent_Identity=24, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI281398151, Length=325, Percent_Identity=24, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 38708; Mature: 38577
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: PS01133 UPF0017
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSEAFKPKRFVQGKHLQTVYNTFFPPKNYLRSKYYFEDILLQLGDGSGDSLWLEHNPPI CCCCCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH SQYSSGPSWNGIYIVMIHGMEGTSDSSYLVSLAQNALLRGYGCIRMNLRNCGRGQGFSKG HHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCCCCC TYNIGQTNDVQDVIDFVWKKLSHRIFLSGFSLSASLVLKYLGERRNHKVEAFSSTNPPLD CCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHH LFKGCEFIDSKEGKFYRDRFVSGFRKKIKNKIIQLPPELEKNAFQTKTFYEFDDRVTAPF HHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEECCCCCCCCC FGYKDAKEYYMDCSCVRYIPDIRHSGIIIHSEDDPVVPPFDWEKIEWNRLPHIRTILSPK CCCCCHHHHHHCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCC GGHVGFLTNPTPEIPDGRWLNKIILDYFDLKVDSGN CCEEEEECCCCCCCCCCHHHHHHHHHHHHEEECCCC >Mature Secondary Structure SSEAFKPKRFVQGKHLQTVYNTFFPPKNYLRSKYYFEDILLQLGDGSGDSLWLEHNPPI CCCCCCCHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCH SQYSSGPSWNGIYIVMIHGMEGTSDSSYLVSLAQNALLRGYGCIRMNLRNCGRGQGFSKG HHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEHHCCCCCCCCCCC TYNIGQTNDVQDVIDFVWKKLSHRIFLSGFSLSASLVLKYLGERRNHKVEAFSSTNPPLD CCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCHH LFKGCEFIDSKEGKFYRDRFVSGFRKKIKNKIIQLPPELEKNAFQTKTFYEFDDRVTAPF HHHCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCEEEECCCCCCCCC FGYKDAKEYYMDCSCVRYIPDIRHSGIIIHSEDDPVVPPFDWEKIEWNRLPHIRTILSPK CCCCCHHHHHHCHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCHHHCCCC GGHVGFLTNPTPEIPDGRWLNKIILDYFDLKVDSGN CCEEEEECCCCCCCCCCHHHHHHHHHHHHEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]