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The map label for this gene is czcC

Identifier: 45657800

GI number: 45657800

Start: 2349899

End: 2351353

Strand: Reverse

Name: czcC

Synonym: LIC11941

Alternate gene names: NA

Gene position: 2351353-2349899 (Counterclockwise)

Preceding gene: 45657801

Following gene: 45657799

Centisome position: 54.97

GC content: 37.39

Gene sequence:

>1455_bases
GTGGAGAACTGTACACTGAATCAGCAAACCATCATTTCTGGAAAACCTATGAAAAAGATTTTCATTTTACTTTTTTTCCT
TGTTTTTACGATTTGTGTTTTTTCGGAGGAATCGAAAACAGAAGTTTTGGATTCTGCTATCTTCCCGAAAGAAAACGAAG
AATCTAAAAATTCACTGAACTGGGAAGAAAAACCTACCTTTGAAAAAGAAAGGGTTTTAGATTTAAAAACCGCAGAGGAA
AAACTTTGGCGTAACAACTTACTTTTACTCGCGTCTCGTTTTAACATAGACGCGCGTAAAGCAGGGATTGAACAAGCGGG
ACTTTACGCGAATCCGAATATTTTTATCGATCAGAGTATCTACGCGGAACCTACACAACGTTATTTTGATTTTTCAAGAT
CAGGACAAACAGTTGTTCAAATTCAGCAACTTTTTTTGTTAGGCGGGAAAATTGGTAAACGAGTTCGTGTGGCCGAACTG
AACGCTAGAATGAGCGAACAAGAATTTTATGATTTGGCTCGAGGACTTGTTACAAAATTAAGGAAGTTGTTTTATGCGAT
CTATTACTATAGACAGGCGATTTCCTTTTATGATCAAAGTTTGGAGGCCTTGGGTAAAACCGTATCTTCGGCGGAAATGG
GTTATAAAAGAAGGGCAATTCTTCAAGCGGAAGTACTTCGTTTAAAAGCTCTTTATTTCTTTTTGAAAAAAGAAAGAGAA
GATTTGAATATTCGAATTTTGGAAAGAGAAGCCGATCTAAGGGTTTTGTTAAACGACGATTCTCTTAAAAATCCAGAAAC
TAAAATCGTTCCGGAAATCGTAGAAGAAAATTTAGATTTATTGGAACCTGCAAAATTAAAAAGGGAAGAACTTTTAGAAG
TCGCAAGAAATAAAAGACCCGATCTTAAAAAAGCGGTTCAAGCTCTTCGATATGAAGAAGCCAATCTAGAATTGCAACAC
GCGAACGCCATTCCGGATCTTGCGTTTGGGCCCATGTACAATCGGGGAGGAACTGCGTTTCAGAACTATTGGGGGATTAC
GGCTCAGTTAAACGTTCCGATTTTCGATAGAAACCAGGGAAATATTAAAGCTTCTGAAAAGGCAGTACTTTCCAGAAAGC
AGGAACTTAAAAACACTCTTTTAGAAGTCGAAAATGAAGTGGCCGTTTCCATTGAAACCGCTCGAGTGAAAGACGAACTT
TATAAAAAATTCAAAAATACTTATACGAGAGAATATACGGATCTCTCTAAGGATATGATTCTAAGTTATGAAAAACGTTA
TATTACAATTTTAGAATTTGCCGATTTTTTTGAAACGTATCGTTCCAGTATAGTCGAAATGTTAAAACTTCAGACCGATC
GAATGGATGCTATTGAAGGAGTTAATTTTTCCGTTGGGCAGGGAGTCCTGATTCCAAAACTCAAGTCAGCCGAGAGCGGC
ACGGAGAATAAGTGA

Upstream 100 bases:

>100_bases
ATTTTTTTACGGAGCCCTATCAGGTTCCTCAAATCTTTACGATAAACTTTTACTACAAACTCGGTTTGTACGCGAAGTAT
AAGGAAAATCAAATATAAAC

Downstream 100 bases:

>100_bases
GGAAACCGATATGAAGATACATTTTACAAGTAGAACACTTTTAATTACCGGAGCGGCGATAGTCATCGCAATTGTTTCTT
TGGCGATTTTGGGACTTTCC

Product: heavy metal efflux pump

Products: NA

Alternate protein names: Cation Efflux System Protein CzcC; Outer Membrane Protein; Cation Efflux-Related Outer Membrane Exported Protein; Heavy Metal Efflux Pump; Outer Membrane Protein lC; Cation Efflux System Protein; Heavy Metal Resistance Protein; LC-Related Efflux Protein; LC Outer Membrane Protein

Number of amino acids: Translated: 484; Mature: 484

Protein sequence:

>484_residues
MENCTLNQQTIISGKPMKKIFILLFFLVFTICVFSEESKTEVLDSAIFPKENEESKNSLNWEEKPTFEKERVLDLKTAEE
KLWRNNLLLLASRFNIDARKAGIEQAGLYANPNIFIDQSIYAEPTQRYFDFSRSGQTVVQIQQLFLLGGKIGKRVRVAEL
NARMSEQEFYDLARGLVTKLRKLFYAIYYYRQAISFYDQSLEALGKTVSSAEMGYKRRAILQAEVLRLKALYFFLKKERE
DLNIRILEREADLRVLLNDDSLKNPETKIVPEIVEENLDLLEPAKLKREELLEVARNKRPDLKKAVQALRYEEANLELQH
ANAIPDLAFGPMYNRGGTAFQNYWGITAQLNVPIFDRNQGNIKASEKAVLSRKQELKNTLLEVENEVAVSIETARVKDEL
YKKFKNTYTREYTDLSKDMILSYEKRYITILEFADFFETYRSSIVEMLKLQTDRMDAIEGVNFSVGQGVLIPKLKSAESG
TENK

Sequences:

>Translated_484_residues
MENCTLNQQTIISGKPMKKIFILLFFLVFTICVFSEESKTEVLDSAIFPKENEESKNSLNWEEKPTFEKERVLDLKTAEE
KLWRNNLLLLASRFNIDARKAGIEQAGLYANPNIFIDQSIYAEPTQRYFDFSRSGQTVVQIQQLFLLGGKIGKRVRVAEL
NARMSEQEFYDLARGLVTKLRKLFYAIYYYRQAISFYDQSLEALGKTVSSAEMGYKRRAILQAEVLRLKALYFFLKKERE
DLNIRILEREADLRVLLNDDSLKNPETKIVPEIVEENLDLLEPAKLKREELLEVARNKRPDLKKAVQALRYEEANLELQH
ANAIPDLAFGPMYNRGGTAFQNYWGITAQLNVPIFDRNQGNIKASEKAVLSRKQELKNTLLEVENEVAVSIETARVKDEL
YKKFKNTYTREYTDLSKDMILSYEKRYITILEFADFFETYRSSIVEMLKLQTDRMDAIEGVNFSVGQGVLIPKLKSAESG
TENK
>Mature_484_residues
MENCTLNQQTIISGKPMKKIFILLFFLVFTICVFSEESKTEVLDSAIFPKENEESKNSLNWEEKPTFEKERVLDLKTAEE
KLWRNNLLLLASRFNIDARKAGIEQAGLYANPNIFIDQSIYAEPTQRYFDFSRSGQTVVQIQQLFLLGGKIGKRVRVAEL
NARMSEQEFYDLARGLVTKLRKLFYAIYYYRQAISFYDQSLEALGKTVSSAEMGYKRRAILQAEVLRLKALYFFLKKERE
DLNIRILEREADLRVLLNDDSLKNPETKIVPEIVEENLDLLEPAKLKREELLEVARNKRPDLKKAVQALRYEEANLELQH
ANAIPDLAFGPMYNRGGTAFQNYWGITAQLNVPIFDRNQGNIKASEKAVLSRKQELKNTLLEVENEVAVSIETARVKDEL
YKKFKNTYTREYTDLSKDMILSYEKRYITILEFADFFETYRSSIVEMLKLQTDRMDAIEGVNFSVGQGVLIPKLKSAESG
TENK

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56053; Mature: 56053

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENCTLNQQTIISGKPMKKIFILLFFLVFTICVFSEESKTEVLDSAIFPKENEESKNSLN
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCC
WEEKPTFEKERVLDLKTAEEKLWRNNLLLLASRFNIDARKAGIEQAGLYANPNIFIDQSI
CCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCHHHCCCCCCCCEEECCCC
YAEPTQRYFDFSRSGQTVVQIQQLFLLGGKIGKRVRVAELNARMSEQEFYDLARGLVTKL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHHHHHHHHHHHH
RKLFYAIYYYRQAISFYDQSLEALGKTVSSAEMGYKRRAILQAEVLRLKALYFFLKKERE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLNIRILEREADLRVLLNDDSLKNPETKIVPEIVEENLDLLEPAKLKREELLEVARNKRP
CCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHCCCC
DLKKAVQALRYEEANLELQHANAIPDLAFGPMYNRGGTAFQNYWGITAQLNVPIFDRNQG
CHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECEEEECCCC
NIKASEKAVLSRKQELKNTLLEVENEVAVSIETARVKDELYKKFKNTYTREYTDLSKDMI
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSYEKRYITILEFADFFETYRSSIVEMLKLQTDRMDAIEGVNFSVGQGVLIPKLKSAESG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCC
TENK
CCCC
>Mature Secondary Structure
MENCTLNQQTIISGKPMKKIFILLFFLVFTICVFSEESKTEVLDSAIFPKENEESKNSLN
CCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCC
WEEKPTFEKERVLDLKTAEEKLWRNNLLLLASRFNIDARKAGIEQAGLYANPNIFIDQSI
CCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHCCHHHCCCCCCCCEEECCCC
YAEPTQRYFDFSRSGQTVVQIQQLFLLGGKIGKRVRVAELNARMSEQEFYDLARGLVTKL
CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEHHHHHCCHHHHHHHHHHHHHHH
RKLFYAIYYYRQAISFYDQSLEALGKTVSSAEMGYKRRAILQAEVLRLKALYFFLKKERE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLNIRILEREADLRVLLNDDSLKNPETKIVPEIVEENLDLLEPAKLKREELLEVARNKRP
CCCEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCHHCCHHHHHHHHHCCCC
DLKKAVQALRYEEANLELQHANAIPDLAFGPMYNRGGTAFQNYWGITAQLNVPIFDRNQG
CHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCHHHHHCCEEEEEECEEEECCCC
NIKASEKAVLSRKQELKNTLLEVENEVAVSIETARVKDELYKKFKNTYTREYTDLSKDMI
CCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSYEKRYITILEFADFFETYRSSIVEMLKLQTDRMDAIEGVNFSVGQGVLIPKLKSAESG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCC
TENK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA