Click here to switch to the map view.

The map label for this gene is 45657746

Identifier: 45657746

GI number: 45657746

Start: 2278887

End: 2279549

Strand: Reverse

Name: 45657746

Synonym: LIC11883

Alternate gene names: NA

Gene position: 2279549-2278887 (Counterclockwise)

Preceding gene: 45657747

Following gene: 45657745

Centisome position: 53.3

GC content: 35.44

Gene sequence:

>663_bases
ATGAAAAAATTAAGAAATATTATCTCTACTGAAATTAGGATTCGGTTTTACATTTTACGAACGTTTTTATTTTATACTCT
ATTCTTATTTTTGAATGTTTCCGTATTTCCAGAAAGCTGGAAAGAGTATTCTCTGAGAGAATTGATTGGGAGATTGAAAT
ATTATACGTATGCCAAGGTCGCTCAGAGTCTGAGAAAAGAATATCTTACCGATCAAGAACAGATATGGGAAGATTGGAAT
TGTACAGTCCCTGTTCCGGAACTCCCCGGGCCTTTTTTTTGCGGACTTTTAAAACAACAATTCCCTCTCGAATCTGTGTC
GGAAAAAATTTCCTCCGTTTCTTCTCCTGAAACAATGATACCGGAAAAATCTTCTGTGAGTCCAGTGCTTGCACTGAATC
CTAGTTTAAAAGTATATAAGAATATTCAATTGTACTCAGGAATGACGATTTCAGGAAAAAATGTAGTGAAAATTGATTCC
GATGAAAATCCGAGTGAGTCTCTTCGTGCGTTTTATCTAAATAACGGACAACTGAGTCACTACGAATTTAGAAACAGGAT
TATAGTATTTGATTGGTCCGGTTCTAAATTGAAGGCCATTTTGGATGTAAAAGTGGATTCTATGTTTAGACCTCTTTCCG
GAAGAGAAATTATACTTCCATGA

Upstream 100 bases:

>100_bases
GATTTCCTATGGGGAACGGAATCGTTTCGAAAAACGATCGACGCCGGAAAAAAATACGATCAATATGCGGAATACTTAAG
TTCCATTGAGAAAGAATATA

Downstream 100 bases:

>100_bases
AACAGATCGCTTCCGGTTTCCTACGAATGATGGATCATCAAGGAATCGATCCGGTTTCTTATATCTGGGTTACTGCAACT
TATGATTCTGATTCTTCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKKLRNIISTEIRIRFYILRTFLFYTLFLFLNVSVFPESWKEYSLRELIGRLKYYTYAKVAQSLRKEYLTDQEQIWEDWN
CTVPVPELPGPFFCGLLKQQFPLESVSEKISSVSSPETMIPEKSSVSPVLALNPSLKVYKNIQLYSGMTISGKNVVKIDS
DENPSESLRAFYLNNGQLSHYEFRNRIIVFDWSGSKLKAILDVKVDSMFRPLSGREIILP

Sequences:

>Translated_220_residues
MKKLRNIISTEIRIRFYILRTFLFYTLFLFLNVSVFPESWKEYSLRELIGRLKYYTYAKVAQSLRKEYLTDQEQIWEDWN
CTVPVPELPGPFFCGLLKQQFPLESVSEKISSVSSPETMIPEKSSVSPVLALNPSLKVYKNIQLYSGMTISGKNVVKIDS
DENPSESLRAFYLNNGQLSHYEFRNRIIVFDWSGSKLKAILDVKVDSMFRPLSGREIILP
>Mature_220_residues
MKKLRNIISTEIRIRFYILRTFLFYTLFLFLNVSVFPESWKEYSLRELIGRLKYYTYAKVAQSLRKEYLTDQEQIWEDWN
CTVPVPELPGPFFCGLLKQQFPLESVSEKISSVSSPETMIPEKSSVSPVLALNPSLKVYKNIQLYSGMTISGKNVVKIDS
DENPSESLRAFYLNNGQLSHYEFRNRIIVFDWSGSKLKAILDVKVDSMFRPLSGREIILP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25587; Mature: 25587

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLRNIISTEIRIRFYILRTFLFYTLFLFLNVSVFPESWKEYSLRELIGRLKYYTYAKV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AQSLRKEYLTDQEQIWEDWNCTVPVPELPGPFFCGLLKQQFPLESVSEKISSVSSPETMI
HHHHHHHHCCCHHHHHCCCCCEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
PEKSSVSPVLALNPSLKVYKNIQLYSGMTISGKNVVKIDSDENPSESLRAFYLNNGQLSH
CCCCCCCEEEEECCCCEEEEEEEEECCEEECCCEEEEECCCCCHHHHEEEEEECCCCEEE
YEFRNRIIVFDWSGSKLKAILDVKVDSMFRPLSGREIILP
EEHHCEEEEEECCCCCEEEEEEEEHHHHHCCCCCCEEECC
>Mature Secondary Structure
MKKLRNIISTEIRIRFYILRTFLFYTLFLFLNVSVFPESWKEYSLRELIGRLKYYTYAKV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AQSLRKEYLTDQEQIWEDWNCTVPVPELPGPFFCGLLKQQFPLESVSEKISSVSSPETMI
HHHHHHHHCCCHHHHHCCCCCEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCC
PEKSSVSPVLALNPSLKVYKNIQLYSGMTISGKNVVKIDSDENPSESLRAFYLNNGQLSH
CCCCCCCEEEEECCCCEEEEEEEEECCEEECCCEEEEECCCCCHHHHEEEEEECCCCEEE
YEFRNRIIVFDWSGSKLKAILDVKVDSMFRPLSGREIILP
EEHHCEEEEEECCCCCEEEEEEEEHHHHHCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA