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The map label for this gene is exbD [C]

Identifier: 45657494

GI number: 45657494

Start: 1984769

End: 1985218

Strand: Direct

Name: exbD [C]

Synonym: LIC11622

Alternate gene names: 45657494

Gene position: 1984769-1985218 (Clockwise)

Preceding gene: 45657493

Following gene: 45657495

Centisome position: 46.4

GC content: 36.44

Gene sequence:

>450_bases
ATGAAGTTTAGAAAGTTTCGATCTTCTGCAAGTAGAACTGGCCAAATTGAATTGGCTCCTTTGATCGATGTAATTTCATT
TATCGTTATTTATTTTTTGATGAATGCGACTTTGGAAAAATCAACTGTGATGAAAATTGAACTTCCTAGGTCTTCTTCCA
CTGCGCAGGAGAAGAAAAAAGACGAACTTGTAATTACTGTAAATAAAGATGGAAAGGTTTTTTTGGATAAGGACACAGAT
CCGGTTCCTTTAGAAAAGCTGACCGAAAAAATCAATGTTTTCCTAGGCCCTTTAGAAAAGAGAGAACCAGGGAAGAATCG
AGTGATCATCCGAGGAGATGGAACTGCAAGTTATCAAACCGTGATCAAAGTAATTGATAAGGTAAATGAAGCAGGAGTAA
GCAAATTTAACCTAGCTATGGTAAGACAAACTGGTTCCGGAGAAAAATAA

Upstream 100 bases:

>100_bases
CTGCTTACGTAGCTTATAACTATTTTCAAAAGAAAAAAGAAGACACGATTGCTGAAATGGAAAATCTTTCCGGTCAGGCT
CTCAAATATATGAAATAAAT

Downstream 100 bases:

>100_bases
GTTCTGGTTTAAGCGGTTTTGATTCATTGCAAATATCCGGGTGGTTTTAGTTTTACGTTGAAGCGAATATTCTCTCCAAT
TTTAAAAGGAATTCTACTTG

Product: biopolymer transport exbd-related transmembrane protein

Products: NA

Alternate protein names: Biopolymer Transport Protein ExbD/lR; Biopolymer Transport ExbD Protein

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MKFRKFRSSASRTGQIELAPLIDVISFIVIYFLMNATLEKSTVMKIELPRSSSTAQEKKKDELVITVNKDGKVFLDKDTD
PVPLEKLTEKINVFLGPLEKREPGKNRVIIRGDGTASYQTVIKVIDKVNEAGVSKFNLAMVRQTGSGEK

Sequences:

>Translated_149_residues
MKFRKFRSSASRTGQIELAPLIDVISFIVIYFLMNATLEKSTVMKIELPRSSSTAQEKKKDELVITVNKDGKVFLDKDTD
PVPLEKLTEKINVFLGPLEKREPGKNRVIIRGDGTASYQTVIKVIDKVNEAGVSKFNLAMVRQTGSGEK
>Mature_149_residues
MKFRKFRSSASRTGQIELAPLIDVISFIVIYFLMNATLEKSTVMKIELPRSSSTAQEKKKDELVITVNKDGKVFLDKDTD
PVPLEKLTEKINVFLGPLEKREPGKNRVIIRGDGTASYQTVIKVIDKVNEAGVSKFNLAMVRQTGSGEK

Specific function: Involved In The Tonb-Dependent Energy-Dependent Transport Of Various Receptor-Bound Substrates. [C]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Type II Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16661; Mature: 16661

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFRKFRSSASRTGQIELAPLIDVISFIVIYFLMNATLEKSTVMKIELPRSSSTAQEKKK
CCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHCC
DELVITVNKDGKVFLDKDTDPVPLEKLTEKINVFLGPLEKREPGKNRVIIRGDGTASYQT
CCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHH
VIKVIDKVNEAGVSKFNLAMVRQTGSGEK
HHHHHHHHHHCCCCHHHEEEEEECCCCCC
>Mature Secondary Structure
MKFRKFRSSASRTGQIELAPLIDVISFIVIYFLMNATLEKSTVMKIELPRSSSTAQEKKK
CCCHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHCC
DELVITVNKDGKVFLDKDTDPVPLEKLTEKINVFLGPLEKREPGKNRVIIRGDGTASYQT
CCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHH
VIKVIDKVNEAGVSKFNLAMVRQTGSGEK
HHHHHHHHHHCCCCHHHEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA