Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is hisD
Identifier: 45657328
GI number: 45657328
Start: 1790240
End: 1791523
Strand: Direct
Name: hisD
Synonym: LIC11453
Alternate gene names: 45657328
Gene position: 1790240-1791523 (Clockwise)
Preceding gene: 45657323
Following gene: 45657329
Centisome position: 41.86
GC content: 39.8
Gene sequence:
>1284_bases ATGGCGATACAAATTTTTAAAGTTGGTTTAAAGGATCATTCTGTTTTAGATCCCGTTTTAAAACGCGCTAGAGAAGACTT AAGTTCCACGCTGGCTCTCGTAAAGCCGATCGTAGAAGACGTAAAAAATAGAGGAGACTCTGCACTTCGAGAATACACTC AAAAATTTGACGAGGTTATCCCTCCTAAATCCTTTGTTTTGGAAATTTCTAAACTGAATCCTAAAATCGATCCTAAACTC AAAACGGCTCTGGTAAAAGCCGCAAAAAATATACGTAACTTTCATAAAATTCAAATTCCAGAAAATAAAGAAATTATAAT ACATGGAAATAAACTTGGGATCCTCCATACTCCGATTGAATCTGTTTCCGTTTATGCTCCTGGTGGAAAAGCATTGTACC CATCTACAATTTTAATGGGAGTGATTCCAGCAAAACTCGCCGGAGTAAAAAATATACAAATTGTAACTCCCCCAAGAAAA GGAACTCTGCCAGATGGTCTGATTGCAGCCGCCAAAATTGCCGGAGCTGATAGAATCGTTATGGCGGGAGGCGCACAGGG AATTGCAGCGGTTTCTTATGGAACGGAAAGTATTCCTTCTTCCGAATTTGTGGTTGGTCCCGGAAATAAGTTTGTGACCG CCGCAAAAGTATATTTAAGCGGTCAAGGTGTAATCGGAATCGATAGCCCAGCAGGTCCGAGCGAGGTTTTGATCATAGCC GACGATTCTGCAGATCCTATGTGGGTTGCGGCAGATCTTTTGTCTCAAGCAGAACACGGAGAAGATTCCGTTGCAATTCT TTGTACGAATTCTTTATCTCTTGCCCAAAAAGTAAAGGAAGAAGTGGAAAAGGCTCTTATAGAAAGACCTAAAAGGGGAG AGATGAAACGTAAATCCATCGAAGATCATGGAAAAATATTCGTTTTTTCTAATTTAGAAGAATGTTTTGTATTTTCAAAT CTGTTTGCTCCCGAACATCTAGAGATCCAAACCAAAAATTTTAAAAAGGATCTAAAAAAAGTAAAACACGCAGGTTCCGT CTTTTTAGGGAATTATTCTCCGGTTGCCATGGGAGATTATATTAGTGGAACTAATCATATACTTCCAACCGCAGGAGCTG CTAGGATTTACTCTTCCTTAGGAGTTTCTACGTTCTTAAAACGGGTTACTTGGCAAGAGGTTTCTAAGAAGTCCATCCAA AATTTGTATCCACACGTTAAAGTTCTTTCCGAATTCGAGGGTCTTGACGAGGAACACGGAAATTCGGTTAGAATCAGACG GTAA
Upstream 100 bases:
>100_bases TAAGCAGAGTGTAAATTGGAGGAATTCCTTTTATAAGCAATTGTTTTTTGAATAAATTTCAGATGCAAGATTCGTTCTTT TGGAAAATCTGGTTTCTTAG
Downstream 100 bases:
>100_bases AAGATTAGAACTTAAGTATATTTAAATATTATGATTGTATGTAAAATCCCTGAAGAAGTTTTGGACCAAGTTCGTCTATG GAAAGCCCAAGGAAAAAGGA
Product: histidinol dehydrogenase
Products: NA
Alternate protein names: HDH
Number of amino acids: Translated: 427; Mature: 426
Protein sequence:
>427_residues MAIQIFKVGLKDHSVLDPVLKRAREDLSSTLALVKPIVEDVKNRGDSALREYTQKFDEVIPPKSFVLEISKLNPKIDPKL KTALVKAAKNIRNFHKIQIPENKEIIIHGNKLGILHTPIESVSVYAPGGKALYPSTILMGVIPAKLAGVKNIQIVTPPRK GTLPDGLIAAAKIAGADRIVMAGGAQGIAAVSYGTESIPSSEFVVGPGNKFVTAAKVYLSGQGVIGIDSPAGPSEVLIIA DDSADPMWVAADLLSQAEHGEDSVAILCTNSLSLAQKVKEEVEKALIERPKRGEMKRKSIEDHGKIFVFSNLEECFVFSN LFAPEHLEIQTKNFKKDLKKVKHAGSVFLGNYSPVAMGDYISGTNHILPTAGAARIYSSLGVSTFLKRVTWQEVSKKSIQ NLYPHVKVLSEFEGLDEEHGNSVRIRR
Sequences:
>Translated_427_residues MAIQIFKVGLKDHSVLDPVLKRAREDLSSTLALVKPIVEDVKNRGDSALREYTQKFDEVIPPKSFVLEISKLNPKIDPKL KTALVKAAKNIRNFHKIQIPENKEIIIHGNKLGILHTPIESVSVYAPGGKALYPSTILMGVIPAKLAGVKNIQIVTPPRK GTLPDGLIAAAKIAGADRIVMAGGAQGIAAVSYGTESIPSSEFVVGPGNKFVTAAKVYLSGQGVIGIDSPAGPSEVLIIA DDSADPMWVAADLLSQAEHGEDSVAILCTNSLSLAQKVKEEVEKALIERPKRGEMKRKSIEDHGKIFVFSNLEECFVFSN LFAPEHLEIQTKNFKKDLKKVKHAGSVFLGNYSPVAMGDYISGTNHILPTAGAARIYSSLGVSTFLKRVTWQEVSKKSIQ NLYPHVKVLSEFEGLDEEHGNSVRIRR >Mature_426_residues AIQIFKVGLKDHSVLDPVLKRAREDLSSTLALVKPIVEDVKNRGDSALREYTQKFDEVIPPKSFVLEISKLNPKIDPKLK TALVKAAKNIRNFHKIQIPENKEIIIHGNKLGILHTPIESVSVYAPGGKALYPSTILMGVIPAKLAGVKNIQIVTPPRKG TLPDGLIAAAKIAGADRIVMAGGAQGIAAVSYGTESIPSSEFVVGPGNKFVTAAKVYLSGQGVIGIDSPAGPSEVLIIAD DSADPMWVAADLLSQAEHGEDSVAILCTNSLSLAQKVKEEVEKALIERPKRGEMKRKSIEDHGKIFVFSNLEECFVFSNL FAPEHLEIQTKNFKKDLKKVKHAGSVFLGNYSPVAMGDYISGTNHILPTAGAARIYSSLGVSTFLKRVTWQEVSKKSIQN LYPHVKVLSEFEGLDEEHGNSVRIRR
Specific function: Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
COG id: COG0141
COG function: function code E; Histidinol dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the histidinol dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1788331, Length=409, Percent_Identity=43.2762836185819, Blast_Score=301, Evalue=5e-83, Organism=Saccharomyces cerevisiae, GI6319819, Length=427, Percent_Identity=42.6229508196721, Blast_Score=304, Evalue=2e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HISX_LEPIC (P62458)
Other databases:
- EMBL: AE016823 - RefSeq: YP_001414.1 - ProteinModelPortal: P62458 - SMR: P62458 - GeneID: 2772163 - GenomeReviews: AE016823_GR - KEGG: lic:LIC11453 - NMPDR: fig|267671.1.peg.1414 - HOGENOM: HBG329596 - OMA: LDAHKNA - ProtClustDB: PRK00877 - BioCyc: LINT-130-01:LINT-130-01-001414-MONOMER - BioCyc: LINT267671:LIC_11453-MONOMER - HAMAP: MF_01024 - InterPro: IPR016161 - InterPro: IPR022695 - InterPro: IPR001692 - InterPro: IPR012131 - PANTHER: PTHR21256:SF2 - PIRSF: PIRSF000099 - PRINTS: PR00083 - TIGRFAMs: TIGR00069
Pfam domain/function: PF00815 Histidinol_dh; SSF53720 Aldehyde_DH/Histidinol_DH
EC number: =1.1.1.23
Molecular weight: Translated: 46381; Mature: 46250
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00611 HISOL_DEHYDROGENASE
Important sites: ACT_SITE 325-325 ACT_SITE 326-326 BINDING 125-125 BINDING 186-186 BINDING 209-209 BINDING 234-234 BINDING 256-256 BINDING 259-259 BINDING 326-326 BINDING 359-359 BINDING 413-413 BINDING 419-419
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQIFKVGLKDHSVLDPVLKRAREDLSSTLALVKPIVEDVKNRGDSALREYTQKFDEVI CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC PPKSFVLEISKLNPKIDPKLKTALVKAAKNIRNFHKIQIPENKEIIIHGNKLGILHTPIE CCHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCEEEEEECCCC SVSVYAPGGKALYPSTILMGVIPAKLAGVKNIQIVTPPRKGTLPDGLIAAAKIAGADRIV CEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEE MAGGAQGIAAVSYGTESIPSSEFVVGPGNKFVTAAKVYLSGQGVIGIDSPAGPSEVLIIA EECCCCCEEEEECCCCCCCCCCEEECCCCCEEEEEEEEEECCCEEEECCCCCCCEEEEEE DDSADPMWVAADLLSQAEHGEDSVAILCTNSLSLAQKVKEEVEKALIERPKRGEMKRKSI CCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH EDHGKIFVFSNLEECFVFSNLFAPEHLEIQTKNFKKDLKKVKHAGSVFLGNYSPVAMGDY HCCCCEEEECCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCEEECCCCCEECCCC ISGTNHILPTAGAARIYSSLGVSTFLKRVTWQEVSKKSIQNLYPHVKVLSEFEGLDEEHG CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NSVRIRR CEEEEEC >Mature Secondary Structure AIQIFKVGLKDHSVLDPVLKRAREDLSSTLALVKPIVEDVKNRGDSALREYTQKFDEVI EEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC PPKSFVLEISKLNPKIDPKLKTALVKAAKNIRNFHKIQIPENKEIIIHGNKLGILHTPIE CCHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCEEEEEECCCC SVSVYAPGGKALYPSTILMGVIPAKLAGVKNIQIVTPPRKGTLPDGLIAAAKIAGADRIV CEEEECCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCEEE MAGGAQGIAAVSYGTESIPSSEFVVGPGNKFVTAAKVYLSGQGVIGIDSPAGPSEVLIIA EECCCCCEEEEECCCCCCCCCCEEECCCCCEEEEEEEEEECCCEEEECCCCCCCEEEEEE DDSADPMWVAADLLSQAEHGEDSVAILCTNSLSLAQKVKEEVEKALIERPKRGEMKRKSI CCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCHHHHHH EDHGKIFVFSNLEECFVFSNLFAPEHLEIQTKNFKKDLKKVKHAGSVFLGNYSPVAMGDY HCCCCEEEECCHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHCCCEEECCCCCEECCCC ISGTNHILPTAGAARIYSSLGVSTFLKRVTWQEVSKKSIQNLYPHVKVLSEFEGLDEEHG CCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC NSVRIRR CEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA