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The map label for this gene is 45657164

Identifier: 45657164

GI number: 45657164

Start: 1582600

End: 1583118

Strand: Direct

Name: 45657164

Synonym: LIC11282

Alternate gene names: NA

Gene position: 1582600-1583118 (Clockwise)

Preceding gene: 45657163

Following gene: 45657167

Centisome position: 37.0

GC content: 26.78

Gene sequence:

>519_bases
TTGTTTATGAATTTGAGTAATCAAGAAAAAATCGATATTTTACGCATATCTAAAAAGATTTTTATATGTATTGTTAGACA
TACTAGAAAAGATTTAGATAAACTTTCACTGAAAACTTGTATTGTTAAGGATCTCAGAATATCCGGAGACGATGTGGATG
ATTTGGTACAGGATATAAACCGATATTTTCAAATCGATTGGTCTTCTTTGAATTTTAAAGAATATTTTGGCGGAGAAGGA
TTTTCTATTGTAGAATTTTTTGTTTTTTTAATTCGTTTTATTTTGAATTTGATCTCTAATTTAATGAAAACAATTTTGCG
AGTTTTGATAAACTTCAATTTTTCTCGCTTTAACTTTTTTAAAAATAATCAAAAAGACTTTCAAATAGAAAATCTGATTA
TAGCCGCTTATTATGGAAAATGGGATAATACGTTGCTCTCGCATTCAATTCCGATTAAAAAAGAGATTCAAAATTGGCAG
ATTCAATACTGGAATCGATTTAAAAGAAGATACTATTGA

Upstream 100 bases:

>100_bases
TTAAAATGACGTTTTAATTTACGGAATTATAAATTACATTCAAATTTCAAAATGTATAGATTTATTCAAATAAAGATTTT
ATTTTTGAGAGGTATAAGGT

Downstream 100 bases:

>100_bases
TCCCTACAAAATTGAGTATTTAAATGTTTATCACAAAATATCGTTTAATGCGAGTAATACGAAAGGGATCGATGGGGAAC
TAAAGCAGAACGCTCTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MFMNLSNQEKIDILRISKKIFICIVRHTRKDLDKLSLKTCIVKDLRISGDDVDDLVQDINRYFQIDWSSLNFKEYFGGEG
FSIVEFFVFLIRFILNLISNLMKTILRVLINFNFSRFNFFKNNQKDFQIENLIIAAYYGKWDNTLLSHSIPIKKEIQNWQ
IQYWNRFKRRYY

Sequences:

>Translated_172_residues
MFMNLSNQEKIDILRISKKIFICIVRHTRKDLDKLSLKTCIVKDLRISGDDVDDLVQDINRYFQIDWSSLNFKEYFGGEG
FSIVEFFVFLIRFILNLISNLMKTILRVLINFNFSRFNFFKNNQKDFQIENLIIAAYYGKWDNTLLSHSIPIKKEIQNWQ
IQYWNRFKRRYY
>Mature_172_residues
MFMNLSNQEKIDILRISKKIFICIVRHTRKDLDKLSLKTCIVKDLRISGDDVDDLVQDINRYFQIDWSSLNFKEYFGGEG
FSIVEFFVFLIRFILNLISNLMKTILRVLINFNFSRFNFFKNNQKDFQIENLIIAAYYGKWDNTLLSHSIPIKKEIQNWQ
IQYWNRFKRRYY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20922; Mature: 20922

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMNLSNQEKIDILRISKKIFICIVRHTRKDLDKLSLKTCIVKDLRISGDDVDDLVQDIN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RYFQIDWSSLNFKEYFGGEGFSIVEFFVFLIRFILNLISNLMKTILRVLINFNFSRFNFF
HHEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
KNNQKDFQIENLIIAAYYGKWDNTLLSHSIPIKKEIQNWQIQYWNRFKRRYY
CCCCCCEEEHHEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFMNLSNQEKIDILRISKKIFICIVRHTRKDLDKLSLKTCIVKDLRISGDDVDDLVQDIN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
RYFQIDWSSLNFKEYFGGEGFSIVEFFVFLIRFILNLISNLMKTILRVLINFNFSRFNFF
HHEEECCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHC
KNNQKDFQIENLIIAAYYGKWDNTLLSHSIPIKKEIQNWQIQYWNRFKRRYY
CCCCCCEEEHHEEEEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA