Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is mreC
Identifier: 45657142
GI number: 45657142
Start: 1555386
End: 1556519
Strand: Direct
Name: mreC
Synonym: LIC11259
Alternate gene names: NA
Gene position: 1555386-1556519 (Clockwise)
Preceding gene: 45657141
Following gene: 45657143
Centisome position: 36.36
GC content: 39.24
Gene sequence:
>1134_bases TTGTTCGGAACGGATTCGAGAGAAAAGGAAGAATCGATGTTATGGTTTCAACTCAGTCGAAGTAAAGAGACTCTTTCTCT CCTTTTTTGTATTTTATTTTCTATTTTATCTTTAACCTTTCGAAGTAACGTAATCGTTCGAGGAATCGCCAGTTTTCAAA GGGTGGGGGACGTAGTATCCGGTTCCATCGATTCTTTTGGTGGATTTTTCAAAGGTGCTTACAATAAGTTGGAATCTTTT GAAACCATACGTAAAGAAAGGGATTCTTGTGTTGCCGTTATGGAAGACTATAAATTGCTTCCACAAGATTTAGAAAAGGC GAATCGGGAAAACGACGCTCTTAGAAAAGAACTCAAATTTCATAGTAGACAAAAATATTCTAGTCTCAAGGCGGAAGTAT TATCTGTTCGTCTCAATTCCATTTATAGAACCATTATCATAGACAAGGGTTCCGATTCCGGAATCAAACCTTATATGCCG GTAACCGCAAGAGCGGTGGATCAAAAGGGAGCGATTATAGAAGCACTTGTAGGGAAAGTAATTGCTGTGACCGGAGGTTC TGCGGTGGTCCAACCACTTATCAATTCCAATTTCAACATGGGAATATCGATGCCGGATACAAATTTATGGGCCAATCTAT CCGGAAATTCAGGAAGAGGAACCGAAGCGCTTTTGAATTATATAGATAGCGGAATTATTATCGATCCTAGAGTGTTTGGA GAATATCCGATGGGACCGAGTGAGATGATCCAATATACTGAGTCTTTAAGTAAAATTGGTAAGCCGGTTTATACATCTGG AGGTGGCGGAGTATTTCCTTCTGGAATTCCTGTTGGAATTATCACAGAAGAAGGACCTAGAAACGGAAGTTTTAAAAGTG CTTATTTAAAACCTTTTGTACGATTTGAGATGTTAGAGAGTGTTACGATCCTTCTTAAACTTCCTGAGAAGTGGTTGGAA ACTTGGCCGGAAGGACAAAATATCACGATCGAAAATCCTTATTTTGGAGAACTTAATTTTCCGGGAGAGGATCGTTTAAA AGAGAATCAAACTAAAACACCTAACACGAATCAGACGCAAACAAACGAAACTAAAAACCAACCGTCCACTCCGAACGAGG AAGATTTACAATGA
Upstream 100 bases:
>100_bases GTGGTACTCGGAACCGGAAAATATCTGGACGAGTTGAAGTATATCAAACCCGGTATACGTTAAGAAATCGGTTGAAATTC GCTAACGTTTCGAACGACTT
Downstream 100 bases:
>100_bases TCTTAGAAAAACTCGTAATCGCGATCGGAATTTTAATCGCTCATTTTTTAAACGGTTCGAATTTATTTGAAATTGGTTCG GCGATCAAACCCGACTTTAT
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: Rod Shape-Determining Protein; MreC Cell Shape-Determining Protein; Cell Shape Determining Protein
Number of amino acids: Translated: 377; Mature: 377
Protein sequence:
>377_residues MFGTDSREKEESMLWFQLSRSKETLSLLFCILFSILSLTFRSNVIVRGIASFQRVGDVVSGSIDSFGGFFKGAYNKLESF ETIRKERDSCVAVMEDYKLLPQDLEKANRENDALRKELKFHSRQKYSSLKAEVLSVRLNSIYRTIIIDKGSDSGIKPYMP VTARAVDQKGAIIEALVGKVIAVTGGSAVVQPLINSNFNMGISMPDTNLWANLSGNSGRGTEALLNYIDSGIIIDPRVFG EYPMGPSEMIQYTESLSKIGKPVYTSGGGGVFPSGIPVGIITEEGPRNGSFKSAYLKPFVRFEMLESVTILLKLPEKWLE TWPEGQNITIENPYFGELNFPGEDRLKENQTKTPNTNQTQTNETKNQPSTPNEEDLQ
Sequences:
>Translated_377_residues MFGTDSREKEESMLWFQLSRSKETLSLLFCILFSILSLTFRSNVIVRGIASFQRVGDVVSGSIDSFGGFFKGAYNKLESF ETIRKERDSCVAVMEDYKLLPQDLEKANRENDALRKELKFHSRQKYSSLKAEVLSVRLNSIYRTIIIDKGSDSGIKPYMP VTARAVDQKGAIIEALVGKVIAVTGGSAVVQPLINSNFNMGISMPDTNLWANLSGNSGRGTEALLNYIDSGIIIDPRVFG EYPMGPSEMIQYTESLSKIGKPVYTSGGGGVFPSGIPVGIITEEGPRNGSFKSAYLKPFVRFEMLESVTILLKLPEKWLE TWPEGQNITIENPYFGELNFPGEDRLKENQTKTPNTNQTQTNETKNQPSTPNEEDLQ >Mature_377_residues MFGTDSREKEESMLWFQLSRSKETLSLLFCILFSILSLTFRSNVIVRGIASFQRVGDVVSGSIDSFGGFFKGAYNKLESF ETIRKERDSCVAVMEDYKLLPQDLEKANRENDALRKELKFHSRQKYSSLKAEVLSVRLNSIYRTIIIDKGSDSGIKPYMP VTARAVDQKGAIIEALVGKVIAVTGGSAVVQPLINSNFNMGISMPDTNLWANLSGNSGRGTEALLNYIDSGIIIDPRVFG EYPMGPSEMIQYTESLSKIGKPVYTSGGGGVFPSGIPVGIITEEGPRNGSFKSAYLKPFVRFEMLESVTILLKLPEKWLE TWPEGQNITIENPYFGELNFPGEDRLKENQTKTPNTNQTQTNETKNQPSTPNEEDLQ
Specific function: Unknown
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41948; Mature: 41948
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGTDSREKEESMLWFQLSRSKETLSLLFCILFSILSLTFRSNVIVRGIASFQRVGDVVS CCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GSIDSFGGFFKGAYNKLESFETIRKERDSCVAVMEDYKLLPQDLEKANRENDALRKELKF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHH HSRQKYSSLKAEVLSVRLNSIYRTIIIDKGSDSGIKPYMPVTARAVDQKGAIIEALVGKV HHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHH IAVTGGSAVVQPLINSNFNMGISMPDTNLWANLSGNSGRGTEALLNYIDSGIIIDPRVFG EEECCCHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHCCCCEECCHHCC EYPMGPSEMIQYTESLSKIGKPVYTSGGGGVFPSGIPVGIITEEGPRNGSFKSAYLKPFV CCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH RFEMLESVTILLKLPEKWLETWPEGQNITIENPYFGELNFPGEDRLKENQTKTPNTNQTQ HHHHHHHHHHHHHCCHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCC TNETKNQPSTPNEEDLQ CCCCCCCCCCCCCCCCC >Mature Secondary Structure MFGTDSREKEESMLWFQLSRSKETLSLLFCILFSILSLTFRSNVIVRGIASFQRVGDVVS CCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH GSIDSFGGFFKGAYNKLESFETIRKERDSCVAVMEDYKLLPQDLEKANRENDALRKELKF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHH HSRQKYSSLKAEVLSVRLNSIYRTIIIDKGSDSGIKPYMPVTARAVDQKGAIIEALVGKV HHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHH IAVTGGSAVVQPLINSNFNMGISMPDTNLWANLSGNSGRGTEALLNYIDSGIIIDPRVFG EEECCCHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHCCCCEECCHHCC EYPMGPSEMIQYTESLSKIGKPVYTSGGGGVFPSGIPVGIITEEGPRNGSFKSAYLKPFV CCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHH RFEMLESVTILLKLPEKWLETWPEGQNITIENPYFGELNFPGEDRLKENQTKTPNTNQTQ HHHHHHHHHHHHHCCHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCCC TNETKNQPSTPNEEDLQ CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA