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The map label for this gene is 45657130

Identifier: 45657130

GI number: 45657130

Start: 1539649

End: 1541805

Strand: Direct

Name: 45657130

Synonym: LIC11247

Alternate gene names: NA

Gene position: 1539649-1541805 (Clockwise)

Preceding gene: 45657129

Following gene: 45657131

Centisome position: 36.0

GC content: 36.58

Gene sequence:

>2157_bases
ATGGGATTGTTGGAAAGAGTCAGTAAGTTAGTCCGATCGGATTCTTCGAGAATTTCCACTTCGACATCTTCAGCAGAAGA
AAAAAAGTCACTGCTCAAAAAATCTGAAGCGTTTCAGCGTAAACCTGGCTTTTTACAAAAAGCACTCGGTATGAGAAAGG
AACTCACGGAAGAGGCGGCTATTTCGGTTCCATCTTTTGAAAATAAGTTGCAGGCTTCCTCTAAAGAATCCGTTGATTTT
GAAGAATCCAATTCTGAGGAGCTTTCTATTCCTGAGTTAGACGAAATTTCGTTGGATGCAAATGAACAGGAAGAGTTTTC
TGATTCTGATCTTTCTATTTCCGAAGACCTTGTCGAAAAAGATTCAGCCTTTGATGAAATTGATTCGCAGGAATTATCTC
AAGATGAAAATGATATTTCTATAGATGACCTTTTCAAAGATGAAACAACTTCTTCATTGGATCAAGAAATTGTCGATTCC
GATAAACTTTCGATACAAGACCAGAATGAAAAAGAAACATCATCTAATGATGACATAACGTCTTTGGAAGAGGCTCCTTT
CGATGATTGGGTTAAAGAGGCAGAACAGGAGGCGCGTCGAACCCTTCCTAAAAAAGATCCAAACGTTTCCGCTTCTGAAA
AGGATGGGTTTTTATTTGATGACGATTCTAATTTTGCTACTTCTCCTATAGATCTTCAGATCGCTTCTCGAAAAAAATTG
GAGAATTATATTTCTGTTTTTGAAATCAGTAAGGAGATAGGAATCTCTACAGACTTTGCGAACTTTTTTGAAAATCTGTT
GTTTTCTATTATGGGACAGATTGGTTCCGAATCGATTGGGATCTTTTCTTCTAAGAATGGAAATCAAGATTTTTTTCGTT
TGGAAGATTACCAAGGTGAGAACTTCAATCAAGAATGGACTATTTCTTCGGAAGAGGAAATCTATCACGCGGTGCATAAC
GCTGGATCGGTTCTTTATGCTAAAGAACTTTTAAAGCCAGCTCTTCCTGCTAAGGAACGAGAGATTATTCAGCAATCGGA
AGCTGAACTTTTAGTTCCGATTCGAACTACGGAAGAGTTCTTTGGAATCATTCTTCTAGGCAAAACAATTAGTGGAGAAG
ATTATACAATTGAAGATCTTGAATTTTTAAAGATCATCGGAGAAATCGCTGGTTCCGTATATAAAAGAATTTATGATACT
GAATTACTTCATCAGGAAAATCAAAATCTAAAAGAAACGGTTCGAGCTAACGAGTTGATCATTTCGCTTGCTAGGGATTT
TTCTTCTGTCCGTAGTATGGATGAAGCCTATGATAAATTATTTTCTGCATTTCGAGAAGAATTAAAAGTTCGTCGTGCTA
CGTTTATGATTTTGGAAAACAAAAACGAATTCCGAGTATTTGCTTCTAATTTACTCACTCCAGAACACGTAGGAAGTTTT
AGACTTTCTTTGGAAAGTTCGATTGTAGGAATCGTTTCTAATATTCCAGGTGTGTTTAGAATTGAAAATTTTAGAAAACA
TCCCGAGCTTGTACAGAAATTATCCAATGACGAACTTGGACTTATGACTGATTTTATAGTGATCCCTTTGATCAATCTAC
ATTGGCTTGTTGGAATGTGGATCGTTCATGAAACTGAAGTTCCTTGGACGGATTCTGATCGAGAAACTGCCGTTGGAATT
TCAGAGGTGCTTGCGCCCGTTTTTTCAAATTTATTACTCGTTCAGGAAAGAGATTCGGTATTTAAGGATCCGTTTAGTCC
GGTTGAGGAAAAAATAGAAGAGATGATTTTGAAATCTACCAGATTAGGGAACTGTTTTAGTTTAACTATATTCAAAATTC
AGAATATATCTAGAATGGTAAAATTAAAAGGTTCAGGATTTTTTGTAAACTATAGTGAGGAACTTAGGAAGGCCATTCAA
GATAATTTATCCGAAGTAGATTTTCATTATCGGATCGGACAGGGAAAATACGCTATGATTCTGGACGGAAAGGATCGGGA
AGAAACACAGGTCCTCATTCGTAAAATTAAAAATCGCCTTGTTGAAGTGGACCGTAGATCCAAGGATTTTCAGACTTCTG
TTGTGCAACATACTCTTTGTTATCCTGCGGATACAAAAGAAAAAGAAAGAATTTTAGAATTACTCGAAGAGTCTTAG

Upstream 100 bases:

>100_bases
ATTGTTAGGTAATCTACCAGATGATCTCATTCGAGAATTTTCTCGTTCCGATTATTTCGAACTTTATAAAAAACTAATGA
AGCAGATCGGTGTATGACCG

Downstream 100 bases:

>100_bases
ATCGATAGAGAATGTTATTCAATTCTCTGAATTTTCTCCTTTTTTTTATAAGTTTTTGTTTCATCTATTTTCGCCTCGGT
TTGAAAGGACAGAACTATTT

Product: cGMP-specific phosphodiesterase

Products: NA

Alternate protein names: CGMP-Specific Phosphodiesterase

Number of amino acids: Translated: 718; Mature: 717

Protein sequence:

>718_residues
MGLLERVSKLVRSDSSRISTSTSSAEEKKSLLKKSEAFQRKPGFLQKALGMRKELTEEAAISVPSFENKLQASSKESVDF
EESNSEELSIPELDEISLDANEQEEFSDSDLSISEDLVEKDSAFDEIDSQELSQDENDISIDDLFKDETTSSLDQEIVDS
DKLSIQDQNEKETSSNDDITSLEEAPFDDWVKEAEQEARRTLPKKDPNVSASEKDGFLFDDDSNFATSPIDLQIASRKKL
ENYISVFEISKEIGISTDFANFFENLLFSIMGQIGSESIGIFSSKNGNQDFFRLEDYQGENFNQEWTISSEEEIYHAVHN
AGSVLYAKELLKPALPAKEREIIQQSEAELLVPIRTTEEFFGIILLGKTISGEDYTIEDLEFLKIIGEIAGSVYKRIYDT
ELLHQENQNLKETVRANELIISLARDFSSVRSMDEAYDKLFSAFREELKVRRATFMILENKNEFRVFASNLLTPEHVGSF
RLSLESSIVGIVSNIPGVFRIENFRKHPELVQKLSNDELGLMTDFIVIPLINLHWLVGMWIVHETEVPWTDSDRETAVGI
SEVLAPVFSNLLLVQERDSVFKDPFSPVEEKIEEMILKSTRLGNCFSLTIFKIQNISRMVKLKGSGFFVNYSEELRKAIQ
DNLSEVDFHYRIGQGKYAMILDGKDREETQVLIRKIKNRLVEVDRRSKDFQTSVVQHTLCYPADTKEKERILELLEES

Sequences:

>Translated_718_residues
MGLLERVSKLVRSDSSRISTSTSSAEEKKSLLKKSEAFQRKPGFLQKALGMRKELTEEAAISVPSFENKLQASSKESVDF
EESNSEELSIPELDEISLDANEQEEFSDSDLSISEDLVEKDSAFDEIDSQELSQDENDISIDDLFKDETTSSLDQEIVDS
DKLSIQDQNEKETSSNDDITSLEEAPFDDWVKEAEQEARRTLPKKDPNVSASEKDGFLFDDDSNFATSPIDLQIASRKKL
ENYISVFEISKEIGISTDFANFFENLLFSIMGQIGSESIGIFSSKNGNQDFFRLEDYQGENFNQEWTISSEEEIYHAVHN
AGSVLYAKELLKPALPAKEREIIQQSEAELLVPIRTTEEFFGIILLGKTISGEDYTIEDLEFLKIIGEIAGSVYKRIYDT
ELLHQENQNLKETVRANELIISLARDFSSVRSMDEAYDKLFSAFREELKVRRATFMILENKNEFRVFASNLLTPEHVGSF
RLSLESSIVGIVSNIPGVFRIENFRKHPELVQKLSNDELGLMTDFIVIPLINLHWLVGMWIVHETEVPWTDSDRETAVGI
SEVLAPVFSNLLLVQERDSVFKDPFSPVEEKIEEMILKSTRLGNCFSLTIFKIQNISRMVKLKGSGFFVNYSEELRKAIQ
DNLSEVDFHYRIGQGKYAMILDGKDREETQVLIRKIKNRLVEVDRRSKDFQTSVVQHTLCYPADTKEKERILELLEES
>Mature_717_residues
GLLERVSKLVRSDSSRISTSTSSAEEKKSLLKKSEAFQRKPGFLQKALGMRKELTEEAAISVPSFENKLQASSKESVDFE
ESNSEELSIPELDEISLDANEQEEFSDSDLSISEDLVEKDSAFDEIDSQELSQDENDISIDDLFKDETTSSLDQEIVDSD
KLSIQDQNEKETSSNDDITSLEEAPFDDWVKEAEQEARRTLPKKDPNVSASEKDGFLFDDDSNFATSPIDLQIASRKKLE
NYISVFEISKEIGISTDFANFFENLLFSIMGQIGSESIGIFSSKNGNQDFFRLEDYQGENFNQEWTISSEEEIYHAVHNA
GSVLYAKELLKPALPAKEREIIQQSEAELLVPIRTTEEFFGIILLGKTISGEDYTIEDLEFLKIIGEIAGSVYKRIYDTE
LLHQENQNLKETVRANELIISLARDFSSVRSMDEAYDKLFSAFREELKVRRATFMILENKNEFRVFASNLLTPEHVGSFR
LSLESSIVGIVSNIPGVFRIENFRKHPELVQKLSNDELGLMTDFIVIPLINLHWLVGMWIVHETEVPWTDSDRETAVGIS
EVLAPVFSNLLLVQERDSVFKDPFSPVEEKIEEMILKSTRLGNCFSLTIFKIQNISRMVKLKGSGFFVNYSEELRKAIQD
NLSEVDFHYRIGQGKYAMILDGKDREETQVLIRKIKNRLVEVDRRSKDFQTSVVQHTLCYPADTKEKERILELLEES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81939; Mature: 81807

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS00107 PROTEIN_KINASE_ATP ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLLERVSKLVRSDSSRISTSTSSAEEKKSLLKKSEAFQRKPGFLQKALGMRKELTEEAA
CCHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ISVPSFENKLQASSKESVDFEESNSEELSIPELDEISLDANEQEEFSDSDLSISEDLVEK
CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHH
DSAFDEIDSQELSQDENDISIDDLFKDETTSSLDQEIVDSDKLSIQDQNEKETSSNDDIT
HHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
SLEEAPFDDWVKEAEQEARRTLPKKDPNVSASEKDGFLFDDDSNFATSPIDLQIASRKKL
HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEHHHHHH
ENYISVFEISKEIGISTDFANFFENLLFSIMGQIGSESIGIFSSKNGNQDFFRLEDYQGE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCC
NFNQEWTISSEEEIYHAVHNAGSVLYAKELLKPALPAKEREIIQQSEAELLVPIRTTEEF
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCHHH
FGIILLGKTISGEDYTIEDLEFLKIIGEIAGSVYKRIYDTELLHQENQNLKETVRANELI
HEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ISLARDFSSVRSMDEAYDKLFSAFREELKVRRATFMILENKNEFRVFASNLLTPEHVGSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCHHHCCCE
RLSLESSIVGIVSNIPGVFRIENFRKHPELVQKLSNDELGLMTDFIVIPLINLHWLVGMW
EEEHHHHHHHHHHCCCCCEEEHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IVHETEVPWTDSDRETAVGISEVLAPVFSNLLLVQERDSVFKDPFSPVEEKIEEMILKST
HEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCHHHHCCCCCHHHHHHHHHHHHHC
RLGNCFSLTIFKIQNISRMVKLKGSGFFVNYSEELRKAIQDNLSEVDFHYRIGQGKYAMI
CCCCEEEEEHHHHHHHHHHEEECCCCEEEECHHHHHHHHHHCHHHCCEEEEECCCCEEEE
LDGKDREETQVLIRKIKNRLVEVDRRSKDFQTSVVQHTLCYPADTKEKERILELLEES
ECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
GLLERVSKLVRSDSSRISTSTSSAEEKKSLLKKSEAFQRKPGFLQKALGMRKELTEEAA
CHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
ISVPSFENKLQASSKESVDFEESNSEELSIPELDEISLDANEQEEFSDSDLSISEDLVEK
CCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHH
DSAFDEIDSQELSQDENDISIDDLFKDETTSSLDQEIVDSDKLSIQDQNEKETSSNDDIT
HHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCH
SLEEAPFDDWVKEAEQEARRTLPKKDPNVSASEKDGFLFDDDSNFATSPIDLQIASRKKL
HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCEEEEHHHHHH
ENYISVFEISKEIGISTDFANFFENLLFSIMGQIGSESIGIFSSKNGNQDFFRLEDYQGE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEECCCCC
NFNQEWTISSEEEIYHAVHNAGSVLYAKELLKPALPAKEREIIQQSEAELLVPIRTTEEF
CCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCHHH
FGIILLGKTISGEDYTIEDLEFLKIIGEIAGSVYKRIYDTELLHQENQNLKETVRANELI
HEEEEECCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
ISLARDFSSVRSMDEAYDKLFSAFREELKVRRATFMILENKNEFRVFASNLLTPEHVGSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHCCCHHHCCCE
RLSLESSIVGIVSNIPGVFRIENFRKHPELVQKLSNDELGLMTDFIVIPLINLHWLVGMW
EEEHHHHHHHHHHCCCCCEEEHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
IVHETEVPWTDSDRETAVGISEVLAPVFSNLLLVQERDSVFKDPFSPVEEKIEEMILKST
HEEECCCCCCCCCCHHHHHHHHHHHHHHHHHEEEECCHHHHCCCCCHHHHHHHHHHHHHC
RLGNCFSLTIFKIQNISRMVKLKGSGFFVNYSEELRKAIQDNLSEVDFHYRIGQGKYAMI
CCCCEEEEEHHHHHHHHHHEEECCCCEEEECHHHHHHHHHHCHHHCCEEEEECCCCEEEE
LDGKDREETQVLIRKIKNRLVEVDRRSKDFQTSVVQHTLCYPADTKEKERILELLEES
ECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA