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The map label for this gene is 45657107

Identifier: 45657107

GI number: 45657107

Start: 1513727

End: 1514878

Strand: Direct

Name: 45657107

Synonym: LIC11224

Alternate gene names: NA

Gene position: 1513727-1514878 (Clockwise)

Preceding gene: 45657105

Following gene: 45657113

Centisome position: 35.39

GC content: 36.55

Gene sequence:

>1152_bases
TTGAAAGTTATAAAGTTTTCATTAAAAATCAAAAGGAGAAAATCAATGGCGTTTGAAAGTCCGGACGGAATGTCCTCAAC
TGAGAGTGTAGGTTTTTTATCCCAGATGAGAAATTCTTTTAAAAGTATTCTTACGGGAATTGTATTATTGCCCGTATCTT
TTATCATTATTTACAATGTAGAAACTTGTGAGCAAGCAAGTGCTGCTCTAAAAAATGCAATGCCCGTCGGACAAGCAAAA
GAAGGCCAACCTTCCTATGTGACTGGAACTTTAAAAGCGAGTCCTCTTGGCGGTGAATTTTTAAGAAGTGGTTCTTTCAT
TTCTTATTCCATAAGTTCGGAAGTATATGCTTGGGACGAACAAGTAAAAACGGAAGGTTCTGGAAGTAATAAAAAAGAAG
TCAGAAATTGTATATTAAAATGGACTTCTTCTCCGGAGAATCCTTCTAGTTTTAAACTTTCTGGATGTCGTACAAAACGC
TATTATAGAAAATCCGTTCAAGACCAGTCTGATTCTGCATCGGGTGCTCTGGTTCATGCAGATGGTAAAAATTATTCGGT
TCAATTAGAAGATGTAGATTTTACTTCTCAAGTTCCTTCCAGAGATGCAAATGAAAACGAAATTCTTGCCGGGCGTTTTG
TTTACGGTGATGGATATTTATATAGTTCTAAATCTTGTGTGGAGTCTGAAAAAGAAGGTTGTGAAAGGATTAAGATCTCT
GTTATTCCGATTCCGGAAGGAGATATGACTTTTGTAGGAGACGTAAAAGGAAATAGAGTAGGTCAGTTTGTTTCTTCGGA
GGGAAATAAATTTTTGAATGCGAGTGTTGGTAATTTTGCGGAAACGATGGCGGATATTAAGTCGGATGATAACACGATGA
AATGGGTTGGGAGATTGATTGGATTTATAGCAATGTTTTCTAGTTTTACTCTGATGGCGGGACCTTTGACTTCTCTTTTA
AGTTTTATTCCATTTGTAGGAGATTTGGGAGGAGGTTTGATCAAAGTGGTTTTAGGAATCGTTGCTTTTATAATCACTGC
GATTACAATTCTACTCATTAAATTTTGGTATATCTGGTTGGTTATACTTTTAGGTGGAATCGGCTACGGTATTTATAAGA
AAAAATACTCGGTCCAAAAAGCTGGAGGTTAG

Upstream 100 bases:

>100_bases
ACATAAAATCATCGTTTCAACGAAAGTCATCAAATTAAAAAATTATTTACTTTTCTTTGATTTTCTAAGAAACTTTTTAG
CTTATAAACTTTCTTAAAAT

Downstream 100 bases:

>100_bases
TTGATTTTTAATCTAAGTCTATTCAAAAAACTTAAAATGTGGGAACTCTCACATTTTTGTGATACTCAATCTGGGTCGTT
CGATAGGTTTTGAGATCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MKVIKFSLKIKRRKSMAFESPDGMSSTESVGFLSQMRNSFKSILTGIVLLPVSFIIIYNVETCEQASAALKNAMPVGQAK
EGQPSYVTGTLKASPLGGEFLRSGSFISYSISSEVYAWDEQVKTEGSGSNKKEVRNCILKWTSSPENPSSFKLSGCRTKR
YYRKSVQDQSDSASGALVHADGKNYSVQLEDVDFTSQVPSRDANENEILAGRFVYGDGYLYSSKSCVESEKEGCERIKIS
VIPIPEGDMTFVGDVKGNRVGQFVSSEGNKFLNASVGNFAETMADIKSDDNTMKWVGRLIGFIAMFSSFTLMAGPLTSLL
SFIPFVGDLGGGLIKVVLGIVAFIITAITILLIKFWYIWLVILLGGIGYGIYKKKYSVQKAGG

Sequences:

>Translated_383_residues
MKVIKFSLKIKRRKSMAFESPDGMSSTESVGFLSQMRNSFKSILTGIVLLPVSFIIIYNVETCEQASAALKNAMPVGQAK
EGQPSYVTGTLKASPLGGEFLRSGSFISYSISSEVYAWDEQVKTEGSGSNKKEVRNCILKWTSSPENPSSFKLSGCRTKR
YYRKSVQDQSDSASGALVHADGKNYSVQLEDVDFTSQVPSRDANENEILAGRFVYGDGYLYSSKSCVESEKEGCERIKIS
VIPIPEGDMTFVGDVKGNRVGQFVSSEGNKFLNASVGNFAETMADIKSDDNTMKWVGRLIGFIAMFSSFTLMAGPLTSLL
SFIPFVGDLGGGLIKVVLGIVAFIITAITILLIKFWYIWLVILLGGIGYGIYKKKYSVQKAGG
>Mature_383_residues
MKVIKFSLKIKRRKSMAFESPDGMSSTESVGFLSQMRNSFKSILTGIVLLPVSFIIIYNVETCEQASAALKNAMPVGQAK
EGQPSYVTGTLKASPLGGEFLRSGSFISYSISSEVYAWDEQVKTEGSGSNKKEVRNCILKWTSSPENPSSFKLSGCRTKR
YYRKSVQDQSDSASGALVHADGKNYSVQLEDVDFTSQVPSRDANENEILAGRFVYGDGYLYSSKSCVESEKEGCERIKIS
VIPIPEGDMTFVGDVKGNRVGQFVSSEGNKFLNASVGNFAETMADIKSDDNTMKWVGRLIGFIAMFSSFTLMAGPLTSLL
SFIPFVGDLGGGLIKVVLGIVAFIITAITILLIKFWYIWLVILLGGIGYGIYKKKYSVQKAGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41797; Mature: 41797

Theoretical pI: Translated: 9.16; Mature: 9.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVIKFSLKIKRRKSMAFESPDGMSSTESVGFLSQMRNSFKSILTGIVLLPVSFIIIYNV
CCEEEEEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
ETCEQASAALKNAMPVGQAKEGQPSYVTGTLKASPLGGEFLRSGSFISYSISSEVYAWDE
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCEEEEECCCCEEECHH
QVKTEGSGSNKKEVRNCILKWTSSPENPSSFKLSGCRTKRYYRKSVQDQSDSASGALVHA
HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCEEEEE
DGKNYSVQLEDVDFTSQVPSRDANENEILAGRFVYGDGYLYSSKSCVESEKEGCERIKIS
CCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCHHHHHHHHCCCCEEEEE
VIPIPEGDMTFVGDVKGNRVGQFVSSEGNKFLNASVGNFAETMADIKSDDNTMKWVGRLI
EEECCCCCEEEEECCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHH
GFIAMFSSFTLMAGPLTSLLSFIPFVGDLGGGLIKVVLGIVAFIITAITILLIKFWYIWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILLGGIGYGIYKKKYSVQKAGG
HHHHHHCCHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKVIKFSLKIKRRKSMAFESPDGMSSTESVGFLSQMRNSFKSILTGIVLLPVSFIIIYNV
CCEEEEEEEHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECC
ETCEQASAALKNAMPVGQAKEGQPSYVTGTLKASPLGGEFLRSGSFISYSISSEVYAWDE
HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCEEEEECCCCEEECHH
QVKTEGSGSNKKEVRNCILKWTSSPENPSSFKLSGCRTKRYYRKSVQDQSDSASGALVHA
HHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCEEEEE
DGKNYSVQLEDVDFTSQVPSRDANENEILAGRFVYGDGYLYSSKSCVESEKEGCERIKIS
CCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCEEECCHHHHHHHHCCCCEEEEE
VIPIPEGDMTFVGDVKGNRVGQFVSSEGNKFLNASVGNFAETMADIKSDDNTMKWVGRLI
EEECCCCCEEEEECCCCCHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHH
GFIAMFSSFTLMAGPLTSLLSFIPFVGDLGGGLIKVVLGIVAFIITAITILLIKFWYIWL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VILLGGIGYGIYKKKYSVQKAGG
HHHHHHCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA