Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45657093
Identifier: 45657093
GI number: 45657093
Start: 1490648
End: 1492678
Strand: Direct
Name: 45657093
Synonym: LIC11210
Alternate gene names: NA
Gene position: 1490648-1492678 (Clockwise)
Preceding gene: 45657090
Following gene: 45657097
Centisome position: 34.85
GC content: 41.85
Gene sequence:
>2031_bases ATGACAACACTCCTCTTATTCATGTTAGGTCTTTTATCTGCCGGAGCAGGGGCTTATACTTTATTCAAAGATAAACCTGC TCCAAAAGATTCTGATCTTGGGAAATCTTCTTCAAAAACATCAGGTAGTGAAACTCGCACCGATTCCAATCTTAGAAGCG ATAGAGGAAAGGAAATTCCTGTAGATCCTCAAAGTGGGAAGGAACAACAACCTTTATCTGAAAGAGAATCTAAACCTGGT AAGGAAGATCCTCAAAAACATAAAGAAGAATTTCCAGGACTTCGTAAAAAGCCTAAGTTAAATCTGAAAAACAAAGTAGA TGATATCATTCGCAATAATTCTAAATTTGCAAATCATCGTCGTCCTCTAATAAATGCAGAAGCTCTCGTTGATAAAGAAA GTTACAACGGTGCATTAGAAATTTATAAAAGAACTAAAACTCGTATTCCAGATGAAGAAATTCAAAATAAAATTCAGGAG AATATTGATCAGATTCAAGACCATCTTGAGAGCGACGAGGATGAAGTCTATCGTCCTGATCGTTATGACGGACCTCCGAT TCCTTTAGGTGATCTGGTTCGAGCAATTAAGGACATCAGTGAGTCGTTAGGCGACACTATTGCTAAAGGATTTTCGAATC CAATTTCTATTCCACTTTCTCCTTGGGATCCAGGAGCCATTCCGGGTCCTCCTCCTACACCTGAAAAATTTCCTCCCGGA CCAGTTTCTTATCAAATTGTGAGCCCCATACCTCCGGAGGAACATATTCCTCTTCCTAGTCCAGGAACTCCCACTCCTTC CGGTGGGACAGGAGGTTCTGGAGGAGGTGCAGGTAGTGGTGTGGGAACTCCCACTCCTTCCAGTGGAGCAGGAAGTTCTG GAGGAGGTGCAGGTGGTGTGGGAACTCCCACTTCTTCCGGTGGGACAGGAAGTTCTGGAGGAGGAACTGCAGGCACATAT CCACAATCTTATTCTGAACCAAATGCAATGGATCTTCCGGATGATACTTTCTTTTCGGAAGAGTGGGAAAAATTTAAGGA TCTCCCTTTAGTTGATCGTAGAACGGGGGAAAATCGTAGATCCGGGACAGAAAGGCGTGCTGGCTCTAAACGAAAGGATC GAAGACAAGGTGAAGACCGAAGAAAAGAAGATCTTTTTAAACTTAGAGACGAATATCTCAAACAAAAAGAAGAACAAAAA AAAAGAGAAAGGGAGGAAGCGGGTTTTGAGGCACAAGATTCGGCTGACTTTGATTGGACAGAAGCTCCCGCTCGAGATGA ATTACCCCCATTTTTAGCCCCAGTTCTTCCTAAAATTGAATTAATACCGATCCGACTTCCAGACCCCCAGGATAAAACTA TACGTCCTGAAGAGGAAGAAACCTCTCAAACTCCTAGTTCAACTTCACAGTCGGGAGAGATTCGATTGGAAGCTCCTACA ACTTCGGAGACTCCAGAAAAAATACCTACACCATTAGAACTTCCTAAAATAGGCCTTCCTGATCCAGAATATCAGAAGAC AGGAGAAACAACTCCTGAAATTCCTCATCTTGCTCCAGCTTCTTCGGATGATTCTACTGTTGCAGATGAGACGCCCGAAA TAGAGGTCCTGGAAGGAGGACTGGAACCTCTGGGTGAAGACGTAGAGGAAGACACTGGAAGTGGAGGAGACGAATCGACA GGGGGGCCTAAAGAAGAAGAACCTAGGATGATCCACGGGATATTGGAGTTAAAACCTCCTGAAGTGGATGATGCTCCGTT TCTGACTCTTACTTACGATTTTGATAAGATTCCTCATGCGTTTAAACTTTCCAAGAATTATAGTATTATGGAATACTCAT ATTATAAATATAAGCCTATGCTCGTCAAAGCACAAGAATTTGCGAGAAGAAAGATGCTAAAAAATGCGTTAAACTATTAT AGAGTTATTAAATCTCAGAACATTCCTCCTGAACTCAGAAAGATGATTAATAGAAATATAAAGGATATTACAGAGTTTAT GGAAAAATACTTAATGGCAAAAGGGGGATGA
Upstream 100 bases:
>100_bases AATATACTATACATCCATGACGTCAATTACAAAAAGAAGTTCGAGAGGGTTTAAGATTACTATCTGGTTTGGTCGATTTT TAGAACAGTAGCTTTTTCCA
Downstream 100 bases:
>100_bases TTTTTTTGACAAGATTGATTGAAAAAAACTCTGACAAAATATTAAAAGATTATCCAAAAGCCTTAAAAGAAACGAGTCCC ATCATTATTTAAAACTATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 676; Mature: 675
Protein sequence:
>676_residues MTTLLLFMLGLLSAGAGAYTLFKDKPAPKDSDLGKSSSKTSGSETRTDSNLRSDRGKEIPVDPQSGKEQQPLSERESKPG KEDPQKHKEEFPGLRKKPKLNLKNKVDDIIRNNSKFANHRRPLINAEALVDKESYNGALEIYKRTKTRIPDEEIQNKIQE NIDQIQDHLESDEDEVYRPDRYDGPPIPLGDLVRAIKDISESLGDTIAKGFSNPISIPLSPWDPGAIPGPPPTPEKFPPG PVSYQIVSPIPPEEHIPLPSPGTPTPSGGTGGSGGGAGSGVGTPTPSSGAGSSGGGAGGVGTPTSSGGTGSSGGGTAGTY PQSYSEPNAMDLPDDTFFSEEWEKFKDLPLVDRRTGENRRSGTERRAGSKRKDRRQGEDRRKEDLFKLRDEYLKQKEEQK KREREEAGFEAQDSADFDWTEAPARDELPPFLAPVLPKIELIPIRLPDPQDKTIRPEEEETSQTPSSTSQSGEIRLEAPT TSETPEKIPTPLELPKIGLPDPEYQKTGETTPEIPHLAPASSDDSTVADETPEIEVLEGGLEPLGEDVEEDTGSGGDEST GGPKEEEPRMIHGILELKPPEVDDAPFLTLTYDFDKIPHAFKLSKNYSIMEYSYYKYKPMLVKAQEFARRKMLKNALNYY RVIKSQNIPPELRKMINRNIKDITEFMEKYLMAKGG
Sequences:
>Translated_676_residues MTTLLLFMLGLLSAGAGAYTLFKDKPAPKDSDLGKSSSKTSGSETRTDSNLRSDRGKEIPVDPQSGKEQQPLSERESKPG KEDPQKHKEEFPGLRKKPKLNLKNKVDDIIRNNSKFANHRRPLINAEALVDKESYNGALEIYKRTKTRIPDEEIQNKIQE NIDQIQDHLESDEDEVYRPDRYDGPPIPLGDLVRAIKDISESLGDTIAKGFSNPISIPLSPWDPGAIPGPPPTPEKFPPG PVSYQIVSPIPPEEHIPLPSPGTPTPSGGTGGSGGGAGSGVGTPTPSSGAGSSGGGAGGVGTPTSSGGTGSSGGGTAGTY PQSYSEPNAMDLPDDTFFSEEWEKFKDLPLVDRRTGENRRSGTERRAGSKRKDRRQGEDRRKEDLFKLRDEYLKQKEEQK KREREEAGFEAQDSADFDWTEAPARDELPPFLAPVLPKIELIPIRLPDPQDKTIRPEEEETSQTPSSTSQSGEIRLEAPT TSETPEKIPTPLELPKIGLPDPEYQKTGETTPEIPHLAPASSDDSTVADETPEIEVLEGGLEPLGEDVEEDTGSGGDEST GGPKEEEPRMIHGILELKPPEVDDAPFLTLTYDFDKIPHAFKLSKNYSIMEYSYYKYKPMLVKAQEFARRKMLKNALNYY RVIKSQNIPPELRKMINRNIKDITEFMEKYLMAKGG >Mature_675_residues TTLLLFMLGLLSAGAGAYTLFKDKPAPKDSDLGKSSSKTSGSETRTDSNLRSDRGKEIPVDPQSGKEQQPLSERESKPGK EDPQKHKEEFPGLRKKPKLNLKNKVDDIIRNNSKFANHRRPLINAEALVDKESYNGALEIYKRTKTRIPDEEIQNKIQEN IDQIQDHLESDEDEVYRPDRYDGPPIPLGDLVRAIKDISESLGDTIAKGFSNPISIPLSPWDPGAIPGPPPTPEKFPPGP VSYQIVSPIPPEEHIPLPSPGTPTPSGGTGGSGGGAGSGVGTPTPSSGAGSSGGGAGGVGTPTSSGGTGSSGGGTAGTYP QSYSEPNAMDLPDDTFFSEEWEKFKDLPLVDRRTGENRRSGTERRAGSKRKDRRQGEDRRKEDLFKLRDEYLKQKEEQKK REREEAGFEAQDSADFDWTEAPARDELPPFLAPVLPKIELIPIRLPDPQDKTIRPEEEETSQTPSSTSQSGEIRLEAPTT SETPEKIPTPLELPKIGLPDPEYQKTGETTPEIPHLAPASSDDSTVADETPEIEVLEGGLEPLGEDVEEDTGSGGDESTG GPKEEEPRMIHGILELKPPEVDDAPFLTLTYDFDKIPHAFKLSKNYSIMEYSYYKYKPMLVKAQEFARRKMLKNALNYYR VIKSQNIPPELRKMINRNIKDITEFMEKYLMAKGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74356; Mature: 74225
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLLLFMLGLLSAGAGAYTLFKDKPAPKDSDLGKSSSKTSGSETRTDSNLRSDRGKEIP CHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCC VDPQSGKEQQPLSERESKPGKEDPQKHKEEFPGLRKKPKLNLKNKVDDIIRNNSKFANHR CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHC RPLINAEALVDKESYNGALEIYKRTKTRIPDEEIQNKIQENIDQIQDHLESDEDEVYRPD CCCCCHHHHHCCHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC RYDGPPIPLGDLVRAIKDISESLGDTIAKGFSNPISIPLSPWDPGAIPGPPPTPEKFPPG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCC PVSYQIVSPIPPEEHIPLPSPGTPTPSGGTGGSGGGAGSGVGTPTPSSGAGSSGGGAGGV CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTPTSSGGTGSSGGGTAGTYPQSYSEPNAMDLPDDTFFSEEWEKFKDLPLVDRRTGENRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHH SGTERRAGSKRKDRRQGEDRRKEDLFKLRDEYLKQKEEQKKREREEAGFEAQDSADFDWT CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC EAPARDELPPFLAPVLPKIELIPIRLPDPQDKTIRPEEEETSQTPSSTSQSGEIRLEAPT CCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCC TSETPEKIPTPLELPKIGLPDPEYQKTGETTPEIPHLAPASSDDSTVADETPEIEVLEGG CCCCHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC LEPLGEDVEEDTGSGGDESTGGPKEEEPRMIHGILELKPPEVDDAPFLTLTYDFDKIPHA HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHHCCCC FKLSKNYSIMEYSYYKYKPMLVKAQEFARRKMLKNALNYYRVIKSQNIPPELRKMINRNI EEECCCCEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCH KDITEFMEKYLMAKGG HHHHHHHHHHHHHCCC >Mature Secondary Structure TTLLLFMLGLLSAGAGAYTLFKDKPAPKDSDLGKSSSKTSGSETRTDSNLRSDRGKEIP HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHCCCCCCC VDPQSGKEQQPLSERESKPGKEDPQKHKEEFPGLRKKPKLNLKNKVDDIIRNNSKFANHR CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHC RPLINAEALVDKESYNGALEIYKRTKTRIPDEEIQNKIQENIDQIQDHLESDEDEVYRPD CCCCCHHHHHCCHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCCC RYDGPPIPLGDLVRAIKDISESLGDTIAKGFSNPISIPLSPWDPGAIPGPPPTPEKFPPG CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCC PVSYQIVSPIPPEEHIPLPSPGTPTPSGGTGGSGGGAGSGVGTPTPSSGAGSSGGGAGGV CCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GTPTSSGGTGSSGGGTAGTYPQSYSEPNAMDLPDDTFFSEEWEKFKDLPLVDRRTGENRR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHH SGTERRAGSKRKDRRQGEDRRKEDLFKLRDEYLKQKEEQKKREREEAGFEAQDSADFDWT CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC EAPARDELPPFLAPVLPKIELIPIRLPDPQDKTIRPEEEETSQTPSSTSQSGEIRLEAPT CCCCCCCCCHHHHHHCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCC TSETPEKIPTPLELPKIGLPDPEYQKTGETTPEIPHLAPASSDDSTVADETPEIEVLEGG CCCCHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC LEPLGEDVEEDTGSGGDESTGGPKEEEPRMIHGILELKPPEVDDAPFLTLTYDFDKIPHA HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECHHHCCCC FKLSKNYSIMEYSYYKYKPMLVKAQEFARRKMLKNALNYYRVIKSQNIPPELRKMINRNI EEECCCCEEEEECCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCH KDITEFMEKYLMAKGG HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA