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The map label for this gene is flgD

Identifier: 45657071

GI number: 45657071

Start: 1461597

End: 1462391

Strand: Direct

Name: flgD

Synonym: LIC11187

Alternate gene names: 45657071

Gene position: 1461597-1462391 (Clockwise)

Preceding gene: 45657070

Following gene: 45657072

Centisome position: 34.17

GC content: 40.5

Gene sequence:

>795_bases
ATGCCAGAAACTACGGGCATTAGCCAACAAGCAAACATAAATCGTTACCTAGAAGGAGACAGAAGTTTTAATATCCGGAA
CCACATGGAAAATTTGGAGAAGGAAGAAAAAAACGGTCTCAAAGGAATCGAAATCCGTTCTACGGTTAAGTCTCTCGGCA
AAGACGATTTTCTTAAGTTACTCATTACTCAGCTTTCTTCCCAAGATCCAACGAACCCCGTTAAAGATCAGGACTTTATC
GCTCAGATGGCGCAGTTCTCTTCCCTTGAACAAATGAATAACATTTCTAACGGAATTCAAAAGATGGGAAATCGTCAGAG
TTTTTCTCTCGTTGGAAAACTTGTTTCCGGTCCTGATTTTGTGAACGGTGAAAACATCGCCGGAATCGCAGGAGCACTTT
TCTTTGATGGAGAAGGTAAAACTTTTGTTCGAGTCAATGGAAGGTCCATCGACGTGGAACAAATTTCTCTTATCAGCGAT
CCTGTTGTTTTAAAAGAACAAGAAGCCGCCTATAATCAAAGTCAGTCTCAACAATCTGTTCCGGCTCGAACTCCCGCTCA
TTCTTCTGAGATTGGAACTAACGTTTATCCTCAAGAAGCACCTTTTGATATTTCGTCTAACGCTCATGAGATGACGACTA
AACAAAAGTCTATGGAATCCTCAATCAAGAATCAGAAGGAAGTCGAAGTTCCTGGTACTGAACAAACTCCGGAATTACAA
GAAAAAACAACTTCCGAAAAGAAGATTTCCGACTGGAAGTTTCCGGGTAAAGATAAAAGCAATTCATACGAATAA

Upstream 100 bases:

>100_bases
CTTTCGAAGAAAATTTTTCCGAGCCTAATGATTTTCCCAAAAAAACCGATGGGAAATCCGAGAAATTGCTCGATCTGAAA
GTATAGGATCGGAGGAAATC

Downstream 100 bases:

>100_bases
ACAAAGTATAATCGAGGTAACAACTTTATGATGAGGTCACTCTATTCCGGTGTATCCGGACTTAAGAACCACCAGGTCCG
AATGGATGTCATTGGAAACA

Product: flagellar hook assembly scaffolding protein

Products: NA

Alternate protein names: ORF 8 [H]

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MPETTGISQQANINRYLEGDRSFNIRNHMENLEKEEKNGLKGIEIRSTVKSLGKDDFLKLLITQLSSQDPTNPVKDQDFI
AQMAQFSSLEQMNNISNGIQKMGNRQSFSLVGKLVSGPDFVNGENIAGIAGALFFDGEGKTFVRVNGRSIDVEQISLISD
PVVLKEQEAAYNQSQSQQSVPARTPAHSSEIGTNVYPQEAPFDISSNAHEMTTKQKSMESSIKNQKEVEVPGTEQTPELQ
EKTTSEKKISDWKFPGKDKSNSYE

Sequences:

>Translated_264_residues
MPETTGISQQANINRYLEGDRSFNIRNHMENLEKEEKNGLKGIEIRSTVKSLGKDDFLKLLITQLSSQDPTNPVKDQDFI
AQMAQFSSLEQMNNISNGIQKMGNRQSFSLVGKLVSGPDFVNGENIAGIAGALFFDGEGKTFVRVNGRSIDVEQISLISD
PVVLKEQEAAYNQSQSQQSVPARTPAHSSEIGTNVYPQEAPFDISSNAHEMTTKQKSMESSIKNQKEVEVPGTEQTPELQ
EKTTSEKKISDWKFPGKDKSNSYE
>Mature_263_residues
PETTGISQQANINRYLEGDRSFNIRNHMENLEKEEKNGLKGIEIRSTVKSLGKDDFLKLLITQLSSQDPTNPVKDQDFIA
QMAQFSSLEQMNNISNGIQKMGNRQSFSLVGKLVSGPDFVNGENIAGIAGALFFDGEGKTFVRVNGRSIDVEQISLISDP
VVLKEQEAAYNQSQSQQSVPARTPAHSSEIGTNVYPQEAPFDISSNAHEMTTKQKSMESSIKNQKEVEVPGTEQTPELQE
KTTSEKKISDWKFPGKDKSNSYE

Specific function: Unknown

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 29309; Mature: 29178

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPETTGISQQANINRYLEGDRSFNIRNHMENLEKEEKNGLKGIEIRSTVKSLGKDDFLKL
CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHH
LITQLSSQDPTNPVKDQDFIAQMAQFSSLEQMNNISNGIQKMGNRQSFSLVGKLVSGPDF
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
VNGENIAGIAGALFFDGEGKTFVRVNGRSIDVEQISLISDPVVLKEQEAAYNQSQSQQSV
CCCCCCCHHEEEEEECCCCCEEEEECCCEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PARTPAHSSEIGTNVYPQEAPFDISSNAHEMTTKQKSMESSIKNQKEVEVPGTEQTPELQ
CCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHH
EKTTSEKKISDWKFPGKDKSNSYE
HHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PETTGISQQANINRYLEGDRSFNIRNHMENLEKEEKNGLKGIEIRSTVKSLGKDDFLKL
CCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHH
LITQLSSQDPTNPVKDQDFIAQMAQFSSLEQMNNISNGIQKMGNRQSFSLVGKLVSGPDF
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
VNGENIAGIAGALFFDGEGKTFVRVNGRSIDVEQISLISDPVVLKEQEAAYNQSQSQQSV
CCCCCCCHHEEEEEECCCCCEEEEECCCEECHHHHHHHCCCCCCCHHHHHHHHHHHHHCC
PARTPAHSSEIGTNVYPQEAPFDISSNAHEMTTKQKSMESSIKNQKEVEVPGTEQTPELQ
CCCCCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCCCCCCHHH
EKTTSEKKISDWKFPGKDKSNSYE
HHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1828465; 9384377 [H]