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The map label for this gene is 45657060

Identifier: 45657060

GI number: 45657060

Start: 1445966

End: 1447033

Strand: Direct

Name: 45657060

Synonym: LIC11176

Alternate gene names: NA

Gene position: 1445966-1447033 (Clockwise)

Preceding gene: 45657057

Following gene: 45657061

Centisome position: 33.81

GC content: 36.52

Gene sequence:

>1068_bases
TTGAAAAATCATTCTCCTTCTCCCGGAGAATGTGGAAACCCGGGGCAAATTTGCCCCGGATTAGCCTTGCTTGACTCTCT
GACCACAATTCGTATTCTATCCAATATGGCAAAAAGAAAATACCGAAACGGAATATCTCTTTTCGGTTATTCCATTTTTC
ATCCGATTAATTTAATTTTAATTGTAAACGTTCTCGTTTATATCCTTCAGCTTTTTGCCGGTGGGACCGGAATTATAGAA
TATTATTTTGCGTTAACTCCTTTTAGAGTATTTCACGGACACTATTGGCAGGTTTTTTCATACGGATTTTTACACGAAGC
ATATGGAATTCCGTTTATACATCTATTTTTTAATATGTATGTATTTGTGATGTTCGGCGGTTTGATCTGTAGATATGTTT
CGGCGTGGAAGTTTACGGTTGTATATCTTACTGCAATTTTAACCGGAGGAATTACTGTTTTACTCGCGCCAGTTCTAAAT
GAAATATTAGGAATTCATTATCCTATGGATCTTTTTCAGACTACAACGTTAGGAGCTAGCGGCGGAGTGACAGGGATACT
CGTTTTATTCGGAATTTTATTTCCTGAAACGGAGGTATTTCTTGTTTTTTTTAGAATGAAAGCGCGTTATGCGGCTTGGA
TCTTTGTGGGCGGCGGTTTTGTGGCTGATTTCGTTGCAGTTTATTATTTCCATTCTCCTTTTGTAGTTAGTAATTCCTGT
CATTTAGGGGGAGCGATCGGCGCGACTCTAGTGGCTCCTTTGATTTTAAAAAATAATTTCGGAAAGATCTTTCCTAAAAA
CAAAGATTCGGAGAATACTAAACCTACACGTTCTTTGAACGAAGATTTAGATTTTCAGGCTCAAAAAAATCTGAAATTGT
TAGACGAACTTTCTAAAAAAATTTCTTATTCCGATCAGGAAGATATATTGATTCCATTACAACAAACGAATGTAAATTTA
TGTCCTCCTCCTACTTTTCAACCTGAAGATCCTTTTTGTCTTCGTTGTGATTGGCTTCCTAATTGTGCTTTAAGAAAATT
GAAAACGAGTTCAGAAAAAACCCCTTAA

Upstream 100 bases:

>100_bases
TCTTTGTTTTTCCAAAGAATTGGTTTTAGTCCTGATTCCTGCATTTTTTTCTTTCCGACTCTAAAGGTTGAGACACGATT
TTTCGATTTAAAGAATGTGA

Downstream 100 bases:

>100_bases
CTTACCATTTCTAAGTTCTAACTTTTCTATTTCAATGATCCTTGGTTATAAATGTACACTTAAGAAATGTGAATCTTTTT
TTAGATTGGGATGAAAAATG

Product: cytoplasmic membrane protein

Products: NA

Alternate protein names: Cytoplasmic Membrane Protein

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MKNHSPSPGECGNPGQICPGLALLDSLTTIRILSNMAKRKYRNGISLFGYSIFHPINLILIVNVLVYILQLFAGGTGIIE
YYFALTPFRVFHGHYWQVFSYGFLHEAYGIPFIHLFFNMYVFVMFGGLICRYVSAWKFTVVYLTAILTGGITVLLAPVLN
EILGIHYPMDLFQTTTLGASGGVTGILVLFGILFPETEVFLVFFRMKARYAAWIFVGGGFVADFVAVYYFHSPFVVSNSC
HLGGAIGATLVAPLILKNNFGKIFPKNKDSENTKPTRSLNEDLDFQAQKNLKLLDELSKKISYSDQEDILIPLQQTNVNL
CPPPTFQPEDPFCLRCDWLPNCALRKLKTSSEKTP

Sequences:

>Translated_355_residues
MKNHSPSPGECGNPGQICPGLALLDSLTTIRILSNMAKRKYRNGISLFGYSIFHPINLILIVNVLVYILQLFAGGTGIIE
YYFALTPFRVFHGHYWQVFSYGFLHEAYGIPFIHLFFNMYVFVMFGGLICRYVSAWKFTVVYLTAILTGGITVLLAPVLN
EILGIHYPMDLFQTTTLGASGGVTGILVLFGILFPETEVFLVFFRMKARYAAWIFVGGGFVADFVAVYYFHSPFVVSNSC
HLGGAIGATLVAPLILKNNFGKIFPKNKDSENTKPTRSLNEDLDFQAQKNLKLLDELSKKISYSDQEDILIPLQQTNVNL
CPPPTFQPEDPFCLRCDWLPNCALRKLKTSSEKTP
>Mature_355_residues
MKNHSPSPGECGNPGQICPGLALLDSLTTIRILSNMAKRKYRNGISLFGYSIFHPINLILIVNVLVYILQLFAGGTGIIE
YYFALTPFRVFHGHYWQVFSYGFLHEAYGIPFIHLFFNMYVFVMFGGLICRYVSAWKFTVVYLTAILTGGITVLLAPVLN
EILGIHYPMDLFQTTTLGASGGVTGILVLFGILFPETEVFLVFFRMKARYAAWIFVGGGFVADFVAVYYFHSPFVVSNSC
HLGGAIGATLVAPLILKNNFGKIFPKNKDSENTKPTRSLNEDLDFQAQKNLKLLDELSKKISYSDQEDILIPLQQTNVNL
CPPPTFQPEDPFCLRCDWLPNCALRKLKTSSEKTP

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39759; Mature: 39759

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNHSPSPGECGNPGQICPGLALLDSLTTIRILSNMAKRKYRNGISLFGYSIFHPINLIL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IVNVLVYILQLFAGGTGIIEYYFALTPFRVFHGHYWQVFSYGFLHEAYGIPFIHLFFNMY
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHH
VFVMFGGLICRYVSAWKFTVVYLTAILTGGITVLLAPVLNEILGIHYPMDLFQTTTLGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
GGVTGILVLFGILFPETEVFLVFFRMKARYAAWIFVGGGFVADFVAVYYFHSPFVVSNSC
CCHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHCCCEEECCCC
HLGGAIGATLVAPLILKNNFGKIFPKNKDSENTKPTRSLNEDLDFQAQKNLKLLDELSKK
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHCCHHHHHHHHHH
ISYSDQEDILIPLQQTNVNLCPPPTFQPEDPFCLRCDWLPNCALRKLKTSSEKTP
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKNHSPSPGECGNPGQICPGLALLDSLTTIRILSNMAKRKYRNGISLFGYSIFHPINLIL
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
IVNVLVYILQLFAGGTGIIEYYFALTPFRVFHGHYWQVFSYGFLHEAYGIPFIHLFFNMY
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCHHHHHHHHHH
VFVMFGGLICRYVSAWKFTVVYLTAILTGGITVLLAPVLNEILGIHYPMDLFQTTTLGAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
GGVTGILVLFGILFPETEVFLVFFRMKARYAAWIFVGGGFVADFVAVYYFHSPFVVSNSC
CCHHHHHHHHHHHCCCHHHHHHHHHHHHCEEEEEEECCHHHHHHHHHHHHCCCEEECCCC
HLGGAIGATLVAPLILKNNFGKIFPKNKDSENTKPTRSLNEDLDFQAQKNLKLLDELSKK
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHCCHHHHHHHHHH
ISYSDQEDILIPLQQTNVNLCPPPTFQPEDPFCLRCDWLPNCALRKLKTSSEKTP
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA