Click here to switch to the map view.

The map label for this gene is 45656992

Identifier: 45656992

GI number: 45656992

Start: 1368974

End: 1370260

Strand: Direct

Name: 45656992

Synonym: LIC11108

Alternate gene names: NA

Gene position: 1368974-1370260 (Clockwise)

Preceding gene: 45656991

Following gene: 45656993

Centisome position: 32.01

GC content: 37.22

Gene sequence:

>1287_bases
ATGTACAATCTTTCTGGGAAGATACAAAAAGTTTCGGATCTATGGCTTCAATTCCGTCAGTCCGGAATGTTTAAATCTTC
CCTATTTGTAAGCATATCCAAAGCCGTCTCTTCATTGCTCAATTTAGTGTTTATGGTATATTCCGTAAATATACTCACAA
AAAGTGAGAACGGACTTTTTCAATACTACGCTGGATTTATACCAGTATTACTGGCAATTGCAGAGTTCGGACTTCCGACC
GCGCTCGTAAAATTTCTAGCGCCAGTAACAACAGACAAACAAAAGATAGGTGACTTATTGTCCTCTTCTTTACTGATCAA
GTTGGGTGCATTAGTCGCATTAACTTTAATCAGTTTGATCGCCTCCATACTGTTAAAGGAAAGTACACTTGTAGTATCGC
TTCTTGTGTTAGGAAGTTTTATACTTTCCTTTAATTCTTTTTTTGAAAGTATCTTTATCTGTTTTGGAAATTATATATCT
TTATCTTTTTGGAACCCTCTACCTAATTTAATCCGATTTGTGGTATTGTATAGCGCCGATCGTTTTACGGAACGGGCTTT
AGGACATTTAGATATACTAGCTATTTTTACTATTTCACCCATATTCGTATTGATACTGTTCTTTTTTGTATTTCCAAGAA
AACAACTCAATTGGAGCGGAGAAAAAAACGGAATTAGAGAGATGACTTATACTCTGACTTCGTTTAACGGATACGCGTTT
TTGGCGTCCATCTTTGCGATGATTTCGGATAGGATGGAAATATTTTTTTTGAAATGGTATTATTCTCAGGAATCCGCCGC
CGTATACGGAACCGCCTTACAACTGTTCAGCGGATTTGTGATCTTATTCTCTGTGATCAATTCACTCATATATCCAAAAC
TATCTAGGTTAGTGGATTCGGATGAGTTTCCAAAGTTTTTATGGAAGTCTGTAATGTTGTCCGTTGGGATGGCTGTATTA
TTGTCGCCCGGATTTTTTTTGGCGGAATGGATATTAAATTTATTATTCCGAGGAAAATACGCGGATTCGATTGGAGTGTT
TCAGATCTTATATCCAAATTATATGCTGCAGTTGGTATTTTCTCCATTAGGAATCGCCTTATTTGCGTTAGGTCAACCGA
GGATGCTCGCGTTTTTGGCGTTATTAAGACTTATATGTGGGGTAGTATTAGCAAATTTACTAATACCAGAATATGGTCCA
ACCGGAGCGGCTTCTTCCTATTTCTTGGGACAGATTGTCTCTTGGTTGATGTTAACCGGGTATTTTCTTGCATTTTTTAG
AAGATGA

Upstream 100 bases:

>100_bases
CCGGTTGCAAGATACCTCAGGTACGGGATCGTTAGTAGTTATATCGCTTTTTTCTCTGTAAATATTATGGTGAAGAGGAA
AGGCAGATTCAAAAAATAAA

Downstream 100 bases:

>100_bases
AACTGAGTTTAAATACGCAAAAAAAATGTGCGGAAGGTTTTGTTACGCGGACTAGACTTTTGGTTTTGATCGGTAAGTTT
TTAATCGATCTGAGAATAAA

Product: polysaccharide exporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MYNLSGKIQKVSDLWLQFRQSGMFKSSLFVSISKAVSSLLNLVFMVYSVNILTKSENGLFQYYAGFIPVLLAIAEFGLPT
ALVKFLAPVTTDKQKIGDLLSSSLLIKLGALVALTLISLIASILLKESTLVVSLLVLGSFILSFNSFFESIFICFGNYIS
LSFWNPLPNLIRFVVLYSADRFTERALGHLDILAIFTISPIFVLILFFFVFPRKQLNWSGEKNGIREMTYTLTSFNGYAF
LASIFAMISDRMEIFFLKWYYSQESAAVYGTALQLFSGFVILFSVINSLIYPKLSRLVDSDEFPKFLWKSVMLSVGMAVL
LSPGFFLAEWILNLLFRGKYADSIGVFQILYPNYMLQLVFSPLGIALFALGQPRMLAFLALLRLICGVVLANLLIPEYGP
TGAASSYFLGQIVSWLMLTGYFLAFFRR

Sequences:

>Translated_428_residues
MYNLSGKIQKVSDLWLQFRQSGMFKSSLFVSISKAVSSLLNLVFMVYSVNILTKSENGLFQYYAGFIPVLLAIAEFGLPT
ALVKFLAPVTTDKQKIGDLLSSSLLIKLGALVALTLISLIASILLKESTLVVSLLVLGSFILSFNSFFESIFICFGNYIS
LSFWNPLPNLIRFVVLYSADRFTERALGHLDILAIFTISPIFVLILFFFVFPRKQLNWSGEKNGIREMTYTLTSFNGYAF
LASIFAMISDRMEIFFLKWYYSQESAAVYGTALQLFSGFVILFSVINSLIYPKLSRLVDSDEFPKFLWKSVMLSVGMAVL
LSPGFFLAEWILNLLFRGKYADSIGVFQILYPNYMLQLVFSPLGIALFALGQPRMLAFLALLRLICGVVLANLLIPEYGP
TGAASSYFLGQIVSWLMLTGYFLAFFRR
>Mature_428_residues
MYNLSGKIQKVSDLWLQFRQSGMFKSSLFVSISKAVSSLLNLVFMVYSVNILTKSENGLFQYYAGFIPVLLAIAEFGLPT
ALVKFLAPVTTDKQKIGDLLSSSLLIKLGALVALTLISLIASILLKESTLVVSLLVLGSFILSFNSFFESIFICFGNYIS
LSFWNPLPNLIRFVVLYSADRFTERALGHLDILAIFTISPIFVLILFFFVFPRKQLNWSGEKNGIREMTYTLTSFNGYAF
LASIFAMISDRMEIFFLKWYYSQESAAVYGTALQLFSGFVILFSVINSLIYPKLSRLVDSDEFPKFLWKSVMLSVGMAVL
LSPGFFLAEWILNLLFRGKYADSIGVFQILYPNYMLQLVFSPLGIALFALGQPRMLAFLALLRLICGVVLANLLIPEYGP
TGAASSYFLGQIVSWLMLTGYFLAFFRR

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48110; Mature: 48110

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: PS00211 ABC_TRANSPORTER_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNLSGKIQKVSDLWLQFRQSGMFKSSLFVSISKAVSSLLNLVFMVYSVNILTKSENGLF
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH
QYYAGFIPVLLAIAEFGLPTALVKFLAPVTTDKQKIGDLLSSSLLIKLGALVALTLISLI
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASILLKESTLVVSLLVLGSFILSFNSFFESIFICFGNYISLSFWNPLPNLIRFVVLYSAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCHHHHHHHHHHHHHH
RFTERALGHLDILAIFTISPIFVLILFFFVFPRKQLNWSGEKNGIREMTYTLTSFNGYAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHCCCHHHH
LASIFAMISDRMEIFFLKWYYSQESAAVYGTALQLFSGFVILFSVINSLIYPKLSRLVDS
HHHHHHHHHCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DEFPKFLWKSVMLSVGMAVLLSPGFFLAEWILNLLFRGKYADSIGVFQILYPNYMLQLVF
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
SPLGIALFALGQPRMLAFLALLRLICGVVLANLLIPEYGPTGAASSYFLGQIVSWLMLTG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
YFLAFFRR
HHHHHHCC
>Mature Secondary Structure
MYNLSGKIQKVSDLWLQFRQSGMFKSSLFVSISKAVSSLLNLVFMVYSVNILTKSENGLF
CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHH
QYYAGFIPVLLAIAEFGLPTALVKFLAPVTTDKQKIGDLLSSSLLIKLGALVALTLISLI
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASILLKESTLVVSLLVLGSFILSFNSFFESIFICFGNYISLSFWNPLPNLIRFVVLYSAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCHHHHHHHHHHHHHH
RFTERALGHLDILAIFTISPIFVLILFFFVFPRKQLNWSGEKNGIREMTYTLTSFNGYAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHCCCHHHH
LASIFAMISDRMEIFFLKWYYSQESAAVYGTALQLFSGFVILFSVINSLIYPKLSRLVDS
HHHHHHHHHCCHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DEFPKFLWKSVMLSVGMAVLLSPGFFLAEWILNLLFRGKYADSIGVFQILYPNYMLQLVF
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
SPLGIALFALGQPRMLAFLALLRLICGVVLANLLIPEYGPTGAASSYFLGQIVSWLMLTG
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
YFLAFFRR
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA