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The map label for this gene is yibD [C]

Identifier: 45656977

GI number: 45656977

Start: 1349308

End: 1350201

Strand: Direct

Name: yibD [C]

Synonym: LIC11093

Alternate gene names: 45656977

Gene position: 1349308-1350201 (Clockwise)

Preceding gene: 45656976

Following gene: 45656978

Centisome position: 31.55

GC content: 35.68

Gene sequence:

>894_bases
ATGAATACTGTTCCTATTTCTGTCGTAATTCCTACTTATAATCGGGAAAATAAAATACTCAATGCAATTTCTTCCGTTTT
GAACCAAACCTTGCCACCGAAAGAAATCATCGTAGTGGACGACGGATCAACTGATTGTACAATTTCTAAAATTCAGCAAA
TGTTTTCGGATAAAATCCGAATTCTGTCTTTAGAGCATAAGGGAGTAAGTCATGCAAGAAATTGGGGAGTGGAAAATGCA
AAGGAAGAGTGGATTGCGTTTTTGGATTCAGACGATGAATGGTTGTCTGAAAAATTAGAGAAACAGTGGAAACATTTAGA
AGAACATCCGAAAACTGAAATTCTTCAGTCCCAAGAGATTTGGATTCGAAACGGAAGAAGGGTAAATCCCCCAATTCGAC
TTTTAAAAAAGGATGGAGAAATCTTTGAACAAAGTCTGGAATTTTGTAGTATTACCCCATCTTCAGTTCTTTTAAGAAAA
GAACTCTATCAGAACCAAGGAGGAATGGACGAAAGACTTCCCGCTTGCGAGGATTATGATCTTTGGTTACGGCTAACTTC
TCAAACTACTGTTGCTCTTTTGGATGAATTTTTACTCGTTCGATATGGGGGACATAAGGATCAACTTTCTTTTCAGTATC
CTGCTATGGATCGTTTTAGAATTTACTCTATTTTAAAATTATTAAGTTCTCATTTACTCAATCAAGCGCAAAGACGACTT
GCCGAACAAAAACTTTTTATAAAATGGGAAGTTTTAAGGCAGGGAAGAGTCAAAAGAAACAACTGGAAAGAGGAATTAGA
TTTTCTTTTAGATTCCGTGATGATAGAAGGATTGGATTCTTATTTTGGAATTCAGATGCAGAAGTTTTTACTGGAAAATC
AAAATTGGATTTGA

Upstream 100 bases:

>100_bases
TTACAACTTGAGATTTTACAGTGGGACTTTGAAGTTGTGGGAACTCTTACAACTTGAGATTTTACAGTGGGACTTTGAAA
TTGTAGAAGCTATTTAACTT

Downstream 100 bases:

>100_bases
GTTTCGATTTCTGAATTTTTTTAGATTTTTAAAAGTATAAGTTAAGAAATCGGGTGCATGAGAATAATACCAGAAAATGA
ATGGGCAATTTTATAAAGGC

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MNTVPISVVIPTYNRENKILNAISSVLNQTLPPKEIIVVDDGSTDCTISKIQQMFSDKIRILSLEHKGVSHARNWGVENA
KEEWIAFLDSDDEWLSEKLEKQWKHLEEHPKTEILQSQEIWIRNGRRVNPPIRLLKKDGEIFEQSLEFCSITPSSVLLRK
ELYQNQGGMDERLPACEDYDLWLRLTSQTTVALLDEFLLVRYGGHKDQLSFQYPAMDRFRIYSILKLLSSHLLNQAQRRL
AEQKLFIKWEVLRQGRVKRNNWKEELDFLLDSVMIEGLDSYFGIQMQKFLLENQNWI

Sequences:

>Translated_297_residues
MNTVPISVVIPTYNRENKILNAISSVLNQTLPPKEIIVVDDGSTDCTISKIQQMFSDKIRILSLEHKGVSHARNWGVENA
KEEWIAFLDSDDEWLSEKLEKQWKHLEEHPKTEILQSQEIWIRNGRRVNPPIRLLKKDGEIFEQSLEFCSITPSSVLLRK
ELYQNQGGMDERLPACEDYDLWLRLTSQTTVALLDEFLLVRYGGHKDQLSFQYPAMDRFRIYSILKLLSSHLLNQAQRRL
AEQKLFIKWEVLRQGRVKRNNWKEELDFLLDSVMIEGLDSYFGIQMQKFLLENQNWI
>Mature_297_residues
MNTVPISVVIPTYNRENKILNAISSVLNQTLPPKEIIVVDDGSTDCTISKIQQMFSDKIRILSLEHKGVSHARNWGVENA
KEEWIAFLDSDDEWLSEKLEKQWKHLEEHPKTEILQSQEIWIRNGRRVNPPIRLLKKDGEIFEQSLEFCSITPSSVLLRK
ELYQNQGGMDERLPACEDYDLWLRLTSQTTVALLDEFLLVRYGGHKDQLSFQYPAMDRFRIYSILKLLSSHLLNQAQRRL
AEQKLFIKWEVLRQGRVKRNNWKEELDFLLDSVMIEGLDSYFGIQMQKFLLENQNWI

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=95, Percent_Identity=36.8421052631579, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 34935; Mature: 34935

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTVPISVVIPTYNRENKILNAISSVLNQTLPPKEIIVVDDGSTDCTISKIQQMFSDKIR
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEE
ILSLEHKGVSHARNWGVENAKEEWIAFLDSDDEWLSEKLEKQWKHLEEHPKTEILQSQEI
EEEECCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHH
WIRNGRRVNPPIRLLKKDGEIFEQSLEFCSITPSSVLLRKELYQNQGGMDERLPACEDYD
HHCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCE
LWLRLTSQTTVALLDEFLLVRYGGHKDQLSFQYPAMDRFRIYSILKLLSSHLLNQAQRRL
EEEEECCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
AEQKLFIKWEVLRQGRVKRNNWKEELDFLLDSVMIEGLDSYFGIQMQKFLLENQNWI
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNTVPISVVIPTYNRENKILNAISSVLNQTLPPKEIIVVDDGSTDCTISKIQQMFSDKIR
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHCCEE
ILSLEHKGVSHARNWGVENAKEEWIAFLDSDDEWLSEKLEKQWKHLEEHPKTEILQSQEI
EEEECCCCHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCHH
WIRNGRRVNPPIRLLKKDGEIFEQSLEFCSITPSSVLLRKELYQNQGGMDERLPACEDYD
HHCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCE
LWLRLTSQTTVALLDEFLLVRYGGHKDQLSFQYPAMDRFRIYSILKLLSSHLLNQAQRRL
EEEEECCCHHHHHHHHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
AEQKLFIKWEVLRQGRVKRNNWKEELDFLLDSVMIEGLDSYFGIQMQKFLLENQNWI
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]