Click here to switch to the map view.

The map label for this gene is 45656958

Identifier: 45656958

GI number: 45656958

Start: 1325501

End: 1326199

Strand: Direct

Name: 45656958

Synonym: LIC11074

Alternate gene names: NA

Gene position: 1325501-1326199 (Clockwise)

Preceding gene: 45656953

Following gene: 45656960

Centisome position: 30.99

GC content: 38.63

Gene sequence:

>699_bases
GTGATAAGCATTCGTAAATTAGTCATTTATTCTGGAATTTCAATCTCATTGATTGTGCTTGTTTGGATTCTTTTTTCTTC
GGAAGATTCCAGTGAAAAAGAAAGAAAAAGTAAGGAAGCGGATAGTGTTGCACTTCTTTTAGGTGGGGGTTCCCCTTCTT
CCGGATCCGGATCTTCTGGAGGTAAAACGAACGAGTCTATTTTTGATTCTTCCTTTTATAAGTCTGGAAAGGGAGAATAC
ATTGAGTCCGATAAAGGTGAACCAAAAGAAGCAGATCCTAACGCTGCGGATGCAGATAATCCTGTAAATCCTCAGACAAA
TAAACCTTATACCAACGAAGAGATGGAACGTTTTAGTCAGTTACGGGAACGTTTTCCGGATAATTCTCTCATTCCTAAAA
AATTAAGTCCTGCCGAAAAAGAAGCGAAGAGACAGGAAGATAGTCGAATCGCAGAAGCGGCGCGTAACGTTTTTGCAAGG
ACGGCCACTCACGATCAGATTCGTTCTTATTATCAAAACATGGAAAAACAAACTCAGGATCGAATGGATATTATCAATTA
TCTCGTGGATCTTCAAAAAGGTTCGGGAGAAGAAGAGACCGAAAAGAAACTGAATAATATTCAAGAATCCATCAAAAATC
AATTACAACAGGTTCAAAAAGAAAAGGAAAACGCGTTCAAACAAGCTGGGATTTTGTAA

Upstream 100 bases:

>100_bases
GGATTCGATTTCTCAAAAAATTAGAGACGGATCCAGGATAGAATTTCCTGGATCGACGGTCTTACAATCAAAATTTCCCG
AATTTCTCGGAGCGTTTCTC

Downstream 100 bases:

>100_bases
GAATTGGATCCAAAAGTTATTTGAAATCCATCTAAAATTGATTTCGTTTCCATTTTAAAAATGTGATTTTCCTAAAACGT
GGTAGTTCCCACATTTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MISIRKLVIYSGISISLIVLVWILFSSEDSSEKERKSKEADSVALLLGGGSPSSGSGSSGGKTNESIFDSSFYKSGKGEY
IESDKGEPKEADPNAADADNPVNPQTNKPYTNEEMERFSQLRERFPDNSLIPKKLSPAEKEAKRQEDSRIAEAARNVFAR
TATHDQIRSYYQNMEKQTQDRMDIINYLVDLQKGSGEEETEKKLNNIQESIKNQLQQVQKEKENAFKQAGIL

Sequences:

>Translated_232_residues
MISIRKLVIYSGISISLIVLVWILFSSEDSSEKERKSKEADSVALLLGGGSPSSGSGSSGGKTNESIFDSSFYKSGKGEY
IESDKGEPKEADPNAADADNPVNPQTNKPYTNEEMERFSQLRERFPDNSLIPKKLSPAEKEAKRQEDSRIAEAARNVFAR
TATHDQIRSYYQNMEKQTQDRMDIINYLVDLQKGSGEEETEKKLNNIQESIKNQLQQVQKEKENAFKQAGIL
>Mature_232_residues
MISIRKLVIYSGISISLIVLVWILFSSEDSSEKERKSKEADSVALLLGGGSPSSGSGSSGGKTNESIFDSSFYKSGKGEY
IESDKGEPKEADPNAADADNPVNPQTNKPYTNEEMERFSQLRERFPDNSLIPKKLSPAEKEAKRQEDSRIAEAARNVFAR
TATHDQIRSYYQNMEKQTQDRMDIINYLVDLQKGSGEEETEKKLNNIQESIKNQLQQVQKEKENAFKQAGIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25991; Mature: 25991

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISIRKLVIYSGISISLIVLVWILFSSEDSSEKERKSKEADSVALLLGGGSPSSGSGSSG
CCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
GKTNESIFDSSFYKSGKGEYIESDKGEPKEADPNAADADNPVNPQTNKPYTNEEMERFSQ
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LRERFPDNSLIPKKLSPAEKEAKRQEDSRIAEAARNVFARTATHDQIRSYYQNMEKQTQD
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RMDIINYLVDLQKGSGEEETEKKLNNIQESIKNQLQQVQKEKENAFKQAGIL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISIRKLVIYSGISISLIVLVWILFSSEDSSEKERKSKEADSVALLLGGGSPSSGSGSSG
CCCHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
GKTNESIFDSSFYKSGKGEYIESDKGEPKEADPNAADADNPVNPQTNKPYTNEEMERFSQ
CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
LRERFPDNSLIPKKLSPAEKEAKRQEDSRIAEAARNVFARTATHDQIRSYYQNMEKQTQD
HHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
RMDIINYLVDLQKGSGEEETEKKLNNIQESIKNQLQQVQKEKENAFKQAGIL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA