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The map label for this gene is 45656772

Identifier: 45656772

GI number: 45656772

Start: 1064898

End: 1066571

Strand: Direct

Name: 45656772

Synonym: LIC10881

Alternate gene names: NA

Gene position: 1064898-1066571 (Clockwise)

Preceding gene: 45656771

Following gene: 45656773

Centisome position: 24.9

GC content: 37.69

Gene sequence:

>1674_bases
ATGTTTGCATTTAATGCTCAGCCTTTTTTCTCTTCTTTAAATCAAAAAAGTCTCCAACGAAAATTTTTCTTAGTTTTCCC
CGTTCTTCTGTCTCTTACATCTGCGGGAACTCTTTGGGCAAAGGCTTCTCTTCGTCTGAAAATATTCGCCAACTCGAAAT
CCGATCCTCCGACGCAAATTTGGGTTCGAGGAAATGGTTATTCTAAAGTGTTTTCTTTGTCGGATCAGTCGTCGGAACTC
ACTATTGACTTAAAAGAACAAGGCGTCTACGACGTGATTCTTACCTTTAAAAGTGGGGAGATGGAACACAAATTTGTAAC
CGTCGATTCCGATGAGAAAAATCTTGAGTTCGTACAAAAAACAAAAAAGGTAACCAACGGGATTAACGTCGTAGGGAAAA
GACCGGAAGCTCCTCCCAATTACGTTTTGAGTCAGGAAGATGCAATTCGTATGCCTGGAGGTTTTGGAGATGCACTCAAG
GCGGTTCAATCCATGCCGGGAATTTCTCCTATGTATCAGATGTATACAGGAGCTAGTTTTCAATCTGCAATTCAAACTTT
TGCTCAGGCTACAAATCCAGATAAGCCAGATAAACCAAACGGCGAAAAAGGTTTTTTAGTGATGCGTGGAGCTGGGGCTC
GTGCAAATCAGTTTTATTTTAATGGTTTACCTATGAGTTATCCGTTTCACGCAGATGGACTCACTTCTGTAATTAACAAC
AACGCGATTCGCTCCTTGGAGTTGTATTCCGGTTCTTATTCTGCGAGATATGGGTTTGCTACTGGAGGAATCATCAATAT
AGAAGGATTTCAAAAAAGGGATTCAAATTTATCAGTAGCTCATTTGAATGCTTTTTTAACCGATGTATACACATATCGTA
ATATTACAAAAGATTTAAATGTTTCCGTATCTGGTAAAAAGTATTATCCAAACATCGTTTTTGGAAGGGTTCCTAATTTG
ATTCCTGCGGAAACCTTTTTGGCGGATTATAATGATTATCAAGCGAGAATCGGTTGGGATATTAGCGAAAATCATTCCTT
ATCGTTTCAGACTTTTGGTGCAAAGGATAAACGTTATCCGTTTAAAGAACTCAGTCAGTACAATCCTAAGGAAACGGCTC
AATCGTTTGCCAATCCTCCTTCTGACGCAGATGCTGCCAGATTAGATCGTATTTTTAGAACCGACGGAATTCAGCATATC
TGGAAACCTAAAAGTTCCATTACAAATACATTCAACGTTTCCAGAAACTATTTTAACGAAGTCACTGAAAATGGTTTAGA
TATGTTGGTTCTCGACATCACTAAAATAGGTTATCCACCTTCTTTGTATAAAAGGGTTCAGACGATTCAAAACGAATATT
TTAACGATTTAAGACAGATAGAGAACGTCTCCGAAGTTGAATTATTAAAACGAAATTGGAAGATTGTTTTCGGTGGTCAG
TATAGAGAAGTAGACACTGGTTACAAAGGGAAGGTTTCTCAGATAGATCTGGATCCTACGTATAATTTTATCCATCAACA
GTTACTCAATTCTTCGGATGTAAAATCAGTTTTAGAAGGGGATTCCGTTAGAACTAGACAGATTGGTACTTTTTTTGAAA
ATAGATTTAAGTTTTACGATTTCAATTTAAATCTAGGTGTAAGAAGGGAATACTACGATAAATCAAGAGAATGA

Upstream 100 bases:

>100_bases
TCTTCCTCAGGAAGGATTTTAAAGTTTTCATATTGTAATTTGACTTTCAAAAACGACACATTGATGGAGGGCGAATGTAG
CATTCTCGGTCCAAACGACT

Downstream 100 bases:

>100_bases
AAAACGGCTCCTCGAATTGGAATCAGTAAGGAAATTGCTTATACACAATCTAGAATTTTTGCGGGATATGGTAAACACTT
TCAGGCTCCCTCGGATGTGA

Product: outer membrane protein, TonB dependent

Products: NA

Alternate protein names: NB Family Protein

Number of amino acids: Translated: 557; Mature: 557

Protein sequence:

>557_residues
MFAFNAQPFFSSLNQKSLQRKFFLVFPVLLSLTSAGTLWAKASLRLKIFANSKSDPPTQIWVRGNGYSKVFSLSDQSSEL
TIDLKEQGVYDVILTFKSGEMEHKFVTVDSDEKNLEFVQKTKKVTNGINVVGKRPEAPPNYVLSQEDAIRMPGGFGDALK
AVQSMPGISPMYQMYTGASFQSAIQTFAQATNPDKPDKPNGEKGFLVMRGAGARANQFYFNGLPMSYPFHADGLTSVINN
NAIRSLELYSGSYSARYGFATGGIINIEGFQKRDSNLSVAHLNAFLTDVYTYRNITKDLNVSVSGKKYYPNIVFGRVPNL
IPAETFLADYNDYQARIGWDISENHSLSFQTFGAKDKRYPFKELSQYNPKETAQSFANPPSDADAARLDRIFRTDGIQHI
WKPKSSITNTFNVSRNYFNEVTENGLDMLVLDITKIGYPPSLYKRVQTIQNEYFNDLRQIENVSEVELLKRNWKIVFGGQ
YREVDTGYKGKVSQIDLDPTYNFIHQQLLNSSDVKSVLEGDSVRTRQIGTFFENRFKFYDFNLNLGVRREYYDKSRE

Sequences:

>Translated_557_residues
MFAFNAQPFFSSLNQKSLQRKFFLVFPVLLSLTSAGTLWAKASLRLKIFANSKSDPPTQIWVRGNGYSKVFSLSDQSSEL
TIDLKEQGVYDVILTFKSGEMEHKFVTVDSDEKNLEFVQKTKKVTNGINVVGKRPEAPPNYVLSQEDAIRMPGGFGDALK
AVQSMPGISPMYQMYTGASFQSAIQTFAQATNPDKPDKPNGEKGFLVMRGAGARANQFYFNGLPMSYPFHADGLTSVINN
NAIRSLELYSGSYSARYGFATGGIINIEGFQKRDSNLSVAHLNAFLTDVYTYRNITKDLNVSVSGKKYYPNIVFGRVPNL
IPAETFLADYNDYQARIGWDISENHSLSFQTFGAKDKRYPFKELSQYNPKETAQSFANPPSDADAARLDRIFRTDGIQHI
WKPKSSITNTFNVSRNYFNEVTENGLDMLVLDITKIGYPPSLYKRVQTIQNEYFNDLRQIENVSEVELLKRNWKIVFGGQ
YREVDTGYKGKVSQIDLDPTYNFIHQQLLNSSDVKSVLEGDSVRTRQIGTFFENRFKFYDFNLNLGVRREYYDKSRE
>Mature_557_residues
MFAFNAQPFFSSLNQKSLQRKFFLVFPVLLSLTSAGTLWAKASLRLKIFANSKSDPPTQIWVRGNGYSKVFSLSDQSSEL
TIDLKEQGVYDVILTFKSGEMEHKFVTVDSDEKNLEFVQKTKKVTNGINVVGKRPEAPPNYVLSQEDAIRMPGGFGDALK
AVQSMPGISPMYQMYTGASFQSAIQTFAQATNPDKPDKPNGEKGFLVMRGAGARANQFYFNGLPMSYPFHADGLTSVINN
NAIRSLELYSGSYSARYGFATGGIINIEGFQKRDSNLSVAHLNAFLTDVYTYRNITKDLNVSVSGKKYYPNIVFGRVPNL
IPAETFLADYNDYQARIGWDISENHSLSFQTFGAKDKRYPFKELSQYNPKETAQSFANPPSDADAARLDRIFRTDGIQHI
WKPKSSITNTFNVSRNYFNEVTENGLDMLVLDITKIGYPPSLYKRVQTIQNEYFNDLRQIENVSEVELLKRNWKIVFGGQ
YREVDTGYKGKVSQIDLDPTYNFIHQQLLNSSDVKSVLEGDSVRTRQIGTFFENRFKFYDFNLNLGVRREYYDKSRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63235; Mature: 63235

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAFNAQPFFSSLNQKSLQRKFFLVFPVLLSLTSAGTLWAKASLRLKIFANSKSDPPTQI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCEE
WVRGNGYSKVFSLSDQSSELTIDLKEQGVYDVILTFKSGEMEHKFVTVDSDEKNLEFVQK
EEECCCCCEEEEECCCCCEEEEEECCCCEEEEEEEEECCCCCEEEEEECCCCCHHHHHHH
TKKVTNGINVVGKRPEAPPNYVLSQEDAIRMPGGFGDALKAVQSMPGISPMYQMYTGASF
HHHHHCCCEEECCCCCCCCCCEECCCCCEECCCCCHHHHHHHHHCCCCCHHHHHHCCCCH
QSAIQTFAQATNPDKPDKPNGEKGFLVMRGAGARANQFYFNGLPMSYPFHADGLTSVINN
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCHHHHHCC
NAIRSLELYSGSYSARYGFATGGIINIEGFQKRDSNLSVAHLNAFLTDVYTYRNITKDLN
CCEEEEEEECCCCCCEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE
VSVSGKKYYPNIVFGRVPNLIPAETFLADYNDYQARIGWDISENHSLSFQTFGAKDKRYP
EEECCCEECCCEEECCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCCC
FKELSQYNPKETAQSFANPPSDADAARLDRIFRTDGIQHIWKPKSSITNTFNVSRNYFNE
HHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCHHHHHHH
VTENGLDMLVLDITKIGYPPSLYKRVQTIQNEYFNDLRQIENVSEVELLKRNWKIVFGGQ
HHHCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCC
YREVDTGYKGKVSQIDLDPTYNFIHQQLLNSSDVKSVLEGDSVRTRQIGTFFENRFKFYD
EEECCCCCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHCCEEEEE
FNLNLGVRREYYDKSRE
EEECCCCCHHHHCCCCC
>Mature Secondary Structure
MFAFNAQPFFSSLNQKSLQRKFFLVFPVLLSLTSAGTLWAKASLRLKIFANSKSDPPTQI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCCCEE
WVRGNGYSKVFSLSDQSSELTIDLKEQGVYDVILTFKSGEMEHKFVTVDSDEKNLEFVQK
EEECCCCCEEEEECCCCCEEEEEECCCCEEEEEEEEECCCCCEEEEEECCCCCHHHHHHH
TKKVTNGINVVGKRPEAPPNYVLSQEDAIRMPGGFGDALKAVQSMPGISPMYQMYTGASF
HHHHHCCCEEECCCCCCCCCCEECCCCCEECCCCCHHHHHHHHHCCCCCHHHHHHCCCCH
QSAIQTFAQATNPDKPDKPNGEKGFLVMRGAGARANQFYFNGLPMSYPFHADGLTSVINN
HHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCCCCHHHHHCC
NAIRSLELYSGSYSARYGFATGGIINIEGFQKRDSNLSVAHLNAFLTDVYTYRNITKDLN
CCEEEEEEECCCCCCEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCE
VSVSGKKYYPNIVFGRVPNLIPAETFLADYNDYQARIGWDISENHSLSFQTFGAKDKRYP
EEECCCEECCCEEECCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCEEEEECCCCCCCCC
FKELSQYNPKETAQSFANPPSDADAARLDRIFRTDGIQHIWKPKSSITNTFNVSRNYFNE
HHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHCCHHHHCCCCCCHHHHHHH
VTENGLDMLVLDITKIGYPPSLYKRVQTIQNEYFNDLRQIENVSEVELLKRNWKIVFGGQ
HHHCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCC
YREVDTGYKGKVSQIDLDPTYNFIHQQLLNSSDVKSVLEGDSVRTRQIGTFFENRFKFYD
EEECCCCCCCCCEEEECCCCHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHCCEEEEE
FNLNLGVRREYYDKSRE
EEECCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA