Click here to switch to the map view.

The map label for this gene is 45656767

Identifier: 45656767

GI number: 45656767

Start: 1060644

End: 1061195

Strand: Direct

Name: 45656767

Synonym: LIC10876

Alternate gene names: NA

Gene position: 1060644-1061195 (Clockwise)

Preceding gene: 45656766

Following gene: 304570487

Centisome position: 24.8

GC content: 37.68

Gene sequence:

>552_bases
ATGTATAAACCACATAAAGAACAATTTCACAAGTTCGAAGAGACAAGTTCTGGAGTATTCGGACTTTTTGATACTCCGGC
AGAAATCATTTCGGCTGCGGCTAAAACAAAAGAAAAAAATTATACGGACTTTGATTGTTTTACTCCGTATCCAGTTCACG
GATTGGACGACGCGATGGGACTTCCTCGTTCCGGACTTCCTTGGGTAACTTTTTTTATGGGACTTTTTGGGTGTACTGTA
GGATTTTCAATGCAGTATTTGACTCATAAATACGATTGGTCTTTGAATATTTCTGGAAAGAATTTAAACGCATGGTTTGC
TTATATTCCTATTACGTTTGAATTCACCGTATTTATGGCAGGCGTGGGAACTGCTGCTGCGATGTTTTTTTTGACCAAAC
TTCCAAAATTAAACCGTAAAGTTTTACATCCGGATATTACTACGGATAAATTTGCACTTTGGATTCCTTCTTCTTCCAAA
GGATATAAAGAAGACGAAGTGTTGAATTTTATCAAAGGACTCGGCGCAAAATACGTCGAGGTTGTAAAATAG

Upstream 100 bases:

>100_bases
TTTTCTTCACGTTGTTCCTATTATTCTGTAGAATCATGCCTGTTATCGCGGTAGCAGAAGTTAAAACCGTTATGCCTCAC
AAAGACGGAGGACATCACTG

Downstream 100 bases:

>100_bases
GAGCGGGGACAAGAATGAAATATTACAAATCTCTAATTTTCCTTTTGGTCGCTGTTCTTTTTTGGAATTGCGAGTCCAAA
ACTCCTCCTCTGGAATATTT

Product: hypothetical protein

Products: NA

Alternate protein names: QuinolCytochrome C Oxidoreductase Membrane Protein; ABC-Type Fe3+ Transport System Protein; Polysulphide Reductase NrfD

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MYKPHKEQFHKFEETSSGVFGLFDTPAEIISAAAKTKEKNYTDFDCFTPYPVHGLDDAMGLPRSGLPWVTFFMGLFGCTV
GFSMQYLTHKYDWSLNISGKNLNAWFAYIPITFEFTVFMAGVGTAAAMFFLTKLPKLNRKVLHPDITTDKFALWIPSSSK
GYKEDEVLNFIKGLGAKYVEVVK

Sequences:

>Translated_183_residues
MYKPHKEQFHKFEETSSGVFGLFDTPAEIISAAAKTKEKNYTDFDCFTPYPVHGLDDAMGLPRSGLPWVTFFMGLFGCTV
GFSMQYLTHKYDWSLNISGKNLNAWFAYIPITFEFTVFMAGVGTAAAMFFLTKLPKLNRKVLHPDITTDKFALWIPSSSK
GYKEDEVLNFIKGLGAKYVEVVK
>Mature_183_residues
MYKPHKEQFHKFEETSSGVFGLFDTPAEIISAAAKTKEKNYTDFDCFTPYPVHGLDDAMGLPRSGLPWVTFFMGLFGCTV
GFSMQYLTHKYDWSLNISGKNLNAWFAYIPITFEFTVFMAGVGTAAAMFFLTKLPKLNRKVLHPDITTDKFALWIPSSSK
GYKEDEVLNFIKGLGAKYVEVVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20700; Mature: 20700

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKPHKEQFHKFEETSSGVFGLFDTPAEIISAAAKTKEKNYTDFDCFTPYPVHGLDDAMG
CCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHC
LPRSGLPWVTFFMGLFGCTVGFSMQYLTHKYDWSLNISGKNLNAWFAYIPITFEFTVFMA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECEEEEECCCCCCEEEEEEEEEEEEEHHHH
GVGTAAAMFFLTKLPKLNRKVLHPDITTDKFALWIPSSSKGYKEDEVLNFIKGLGAKYVE
HHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCHHHHH
VVK
HCC
>Mature Secondary Structure
MYKPHKEQFHKFEETSSGVFGLFDTPAEIISAAAKTKEKNYTDFDCFTPYPVHGLDDAMG
CCCCCHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHC
LPRSGLPWVTFFMGLFGCTVGFSMQYLTHKYDWSLNISGKNLNAWFAYIPITFEFTVFMA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECEEEEECCCCCCEEEEEEEEEEEEEHHHH
GVGTAAAMFFLTKLPKLNRKVLHPDITTDKFALWIPSSSKGYKEDEVLNFIKGLGAKYVE
HHHHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCHHHHH
VVK
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA