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The map label for this gene is 45656739

Identifier: 45656739

GI number: 45656739

Start: 1025836

End: 1026213

Strand: Direct

Name: 45656739

Synonym: LIC10848

Alternate gene names: NA

Gene position: 1025836-1026213 (Clockwise)

Preceding gene: 45656738

Following gene: 45656740

Centisome position: 23.98

GC content: 39.15

Gene sequence:

>378_bases
ATGTCTAAAAAAACTGCAACTAGAACTTCTCGCCCCATTACAGAATACGGCGCCATCTCCACGGTTCTCGGAAGAGAAAC
TTCCTTTTCCGGAATTTTAAACTTTCAAAGACCTCTTGAAATTTCAGGTGAGTTCCAAGGTGAAATTGAATCCGAAGGAT
TTTTACTCATCAGTGAAGGCGCAAAGATACGTGCTAATATCAAAGCAGGTACCGTAATCGTAGGTGGTGAAATTACCGGA
AACGTAATCGCTACTGAAAAGTTAGAAATGCTTTCGACTGGGAAAGTAAATGGAAATATCAAAACATCCAAATTACAAAT
TGCAGATGGAGTGATCTTTGATGGGAACTGTGAAATGATTCAGCCCAATAAAGATTGA

Upstream 100 bases:

>100_bases
CTTCTAAAAAATACATTGGTCGTTGTCAGGCATTTATCACAAATCCTCCTCCTGCAGACTGGGATGGGGTTTTTGAAATG
AAAACGAAATAAGAGAATCC

Downstream 100 bases:

>100_bases
CCCGCGCTTTCACCCGTAAAAAGTGGTACCTGCTAACCCGAAAAAGCCTAAGGATAGGGCTGAGATTGGCAAGATAGCCC
TCATTCTTCTCCTCGGTTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 124

Protein sequence:

>125_residues
MSKKTATRTSRPITEYGAISTVLGRETSFSGILNFQRPLEISGEFQGEIESEGFLLISEGAKIRANIKAGTVIVGGEITG
NVIATEKLEMLSTGKVNGNIKTSKLQIADGVIFDGNCEMIQPNKD

Sequences:

>Translated_125_residues
MSKKTATRTSRPITEYGAISTVLGRETSFSGILNFQRPLEISGEFQGEIESEGFLLISEGAKIRANIKAGTVIVGGEITG
NVIATEKLEMLSTGKVNGNIKTSKLQIADGVIFDGNCEMIQPNKD
>Mature_124_residues
SKKTATRTSRPITEYGAISTVLGRETSFSGILNFQRPLEISGEFQGEIESEGFLLISEGAKIRANIKAGTVIVGGEITGN
VIATEKLEMLSTGKVNGNIKTSKLQIADGVIFDGNCEMIQPNKD

Specific function: Unknown

COG id: COG1664

COG function: function code M; Integral membrane protein CcmA involved in cell shape determination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13379; Mature: 13248

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKTATRTSRPITEYGAISTVLGRETSFSGILNFQRPLEISGEFQGEIESEGFLLISEG
CCCCCCCCCCCCCCHHCCEEEECCCCCCCCEEEECCCCEEECCCCCCEECCCCEEEEECC
AKIRANIKAGTVIVGGEITGNVIATEKLEMLSTGKVNGNIKTSKLQIADGVIFDGNCEMI
CEEEEEECCCEEEECCCCCCCEEEECEEEEEECCCCCCCEEEEEEEEECCEEECCCCCEE
QPNKD
CCCCC
>Mature Secondary Structure 
SKKTATRTSRPITEYGAISTVLGRETSFSGILNFQRPLEISGEFQGEIESEGFLLISEG
CCCCCCCCCCCCCHHCCEEEECCCCCCCCEEEECCCCEEECCCCCCEECCCCEEEEECC
AKIRANIKAGTVIVGGEITGNVIATEKLEMLSTGKVNGNIKTSKLQIADGVIFDGNCEMI
CEEEEEECCCEEEECCCCCCCEEEECEEEEEECCCCCCCEEEEEEEEECCEEECCCCCEE
QPNKD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA