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The map label for this gene is 45656717

Identifier: 45656717

GI number: 45656717

Start: 1004318

End: 1004920

Strand: Direct

Name: 45656717

Synonym: LIC10826

Alternate gene names: NA

Gene position: 1004318-1004920 (Clockwise)

Preceding gene: 45656716

Following gene: 45656718

Centisome position: 23.48

GC content: 27.36

Gene sequence:

>603_bases
ATGATAAATTATCGTAATAGAATATTACTTATATTATTATTTAGTTTTCAAGGATGCGTATTTACAGGAAGTTCCGAAAA
TATACATTCCATAAATAGTTTGGTTTCTGAAAAGAATTGCAAAGGCTTGTTTCGGATTAAATTAATTGTTCCAAATATAA
AATCAATGCAAGCCCAAGAAGGCAGGTTTAGACTTTTTGATAATCTATATTCGGATTCAATGAAGCAAGTCATTATTAGC
AATTCTTTGAATCGAGAAGAAAATAATGATAATTCGAATATTTATGGAGAATTGAAATATGAAGAAGAATCGGAGATCAT
AAATGATCTATTTAATATTTTTGGTATTATTACAATGGGAATATTTCCTATCAGATCAAACAGAAAATCAAAAATTTCTT
TTAACATTTATGAAAACAAACAAAAAAAAGAAATTTATCATTCCGAGATAAGCATTTCTTGGTCCGCTTATTATTCTATT
TGGGGAGGGGTGATATATCCGTTCTATCGAGTAGAGAAAAAGCAAAAAGAATTGATTAAGCTTGCAATGGATAAATTTAA
TTCTGAATATTGTTGTCTCGACTCAAAAATTAACAATTGTTAA

Upstream 100 bases:

>100_bases
GTAGAATATCAAATGTTATACAATTGCGCAGTAGGTAATACAGCCGGAACTAGCAGCCGAAATACTAATGGATTAGGAAT
GTGAAAACTGGAGTGTAAAA

Downstream 100 bases:

>100_bases
ATTATTATTGTAATTTGTAATATTCGAACGTAAGAGAATATGATGATTCAATCGAACTCAATTCTTTTAGGGAACTTATA
TAAAACCTTAAAAAATAGAA

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MINYRNRILLILLFSFQGCVFTGSSENIHSINSLVSEKNCKGLFRIKLIVPNIKSMQAQEGRFRLFDNLYSDSMKQVIIS
NSLNREENNDNSNIYGELKYEEESEIINDLFNIFGIITMGIFPIRSNRKSKISFNIYENKQKKEIYHSEISISWSAYYSI
WGGVIYPFYRVEKKQKELIKLAMDKFNSEYCCLDSKINNC

Sequences:

>Translated_200_residues
MINYRNRILLILLFSFQGCVFTGSSENIHSINSLVSEKNCKGLFRIKLIVPNIKSMQAQEGRFRLFDNLYSDSMKQVIIS
NSLNREENNDNSNIYGELKYEEESEIINDLFNIFGIITMGIFPIRSNRKSKISFNIYENKQKKEIYHSEISISWSAYYSI
WGGVIYPFYRVEKKQKELIKLAMDKFNSEYCCLDSKINNC
>Mature_200_residues
MINYRNRILLILLFSFQGCVFTGSSENIHSINSLVSEKNCKGLFRIKLIVPNIKSMQAQEGRFRLFDNLYSDSMKQVIIS
NSLNREENNDNSNIYGELKYEEESEIINDLFNIFGIITMGIFPIRSNRKSKISFNIYENKQKKEIYHSEISISWSAYYSI
WGGVIYPFYRVEKKQKELIKLAMDKFNSEYCCLDSKINNC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23474; Mature: 23474

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINYRNRILLILLFSFQGCVFTGSSENIHSINSLVSEKNCKGLFRIKLIVPNIKSMQAQE
CCCCCHHEEEEEEECCCCEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHCCC
GRFRLFDNLYSDSMKQVIISNSLNREENNDNSNIYGELKYEEESEIINDLFNIFGIITMG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHC
IFPIRSNRKSKISFNIYENKQKKEIYHSEISISWSAYYSIWGGVIYPFYRVEKKQKELIK
EEEECCCCCCEEEEEEECCCHHHHHHHHHEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHH
LAMDKFNSEYCCLDSKINNC
HHHHHCCCCEEEECCCCCCC
>Mature Secondary Structure
MINYRNRILLILLFSFQGCVFTGSSENIHSINSLVSEKNCKGLFRIKLIVPNIKSMQAQE
CCCCCHHEEEEEEECCCCEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHCCC
GRFRLFDNLYSDSMKQVIISNSLNREENNDNSNIYGELKYEEESEIINDLFNIFGIITMG
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHC
IFPIRSNRKSKISFNIYENKQKKEIYHSEISISWSAYYSIWGGVIYPFYRVEKKQKELIK
EEEECCCCCCEEEEEEECCCHHHHHHHHHEEEEHHHHHHHHCCHHHHHHHHHHHHHHHHH
LAMDKFNSEYCCLDSKINNC
HHHHHCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA