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The map label for this gene is flaA-2

Identifier: 45656680

GI number: 45656680

Start: 954316

End: 955035

Strand: Direct

Name: flaA-2

Synonym: LIC10787

Alternate gene names: 45656680

Gene position: 954316-955035 (Clockwise)

Preceding gene: 45656679

Following gene: 45656681

Centisome position: 22.31

GC content: 41.94

Gene sequence:

>720_bases
ATGAGGAAGAAGATCATCTTACTTGCTGGACTGCTCTGCATTCTTGCAGTACCAGGTGTCTATAGCCAGCAGACCGGAAA
TAATCAGGCTGGTGGAAATCAACAAACAGGGGCAAACCCAGATCCTCTTGAAAAGCTCATACTAGAGAATTTCGAAGAGG
CGGAAGACTGGAGAGCGAAGTCAACAACTCCTCTTGGAGAAACCAAGGTTCTCAAAATGGTCCAAAGAGGACTGATAAGA
GACGTGTTCGACGAAAACACGGTTCCGGATAACGGAGGAGATCAGATCGAAAAGAATCATATCCTTGGAGTAAAAACAAA
TTATACCGTCAGAGGATTTGATAGAGTGGAAGTATTTCCTCCTCACGAATACGTAGTAAAAGGGAAAGCTCGTCAATTAT
CTATCTGGGCTTTGGGAAGAAAGTTTCGTCATACTCTTTTCGCTAAACTAAGAGACTACAGAGGGAACACCCATAATATC
CGATTAGGAAGATTGGACTACTTTGGTTGGAGAAAACTAACCGCTACAATTCCTGGTTTTGTGCCTCAAAGTACAAGATT
CGCTCTTTTAGATAAGAATCTTCATTTTGTATCTCTATTTGTAGTCAGCGACGTTCACGAAGTGGGAGGACAATTCTACT
TTTATGTGGACGATTTGGAAGTTCGTGCCGATAAATCGGATGCGAAGTATCCTGGATCGGAAATTAAAGATAATTGGTAA

Upstream 100 bases:

>100_bases
GTCCAAGTGATTCTTTCATACTTTTTGGAAGTGGTTCCAAGAGTTGGGCTTGTCTCTAAACGATTTTTTATTTTGTATTT
TGTAACCAGGAGAAATTCTC

Downstream 100 bases:

>100_bases
TCTTCGGGGAAAGGAAAGTAAACATGAGAAGATTCATGAACTCGTTCAAAATCACTGCGGCTCTAACTACGATTCTAGGA
GGAGTGATTCTATTAGGAAT

Product: flagellar filament sheath protein

Products: NA

Alternate protein names: P-H42 [H]

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MRKKIILLAGLLCILAVPGVYSQQTGNNQAGGNQQTGANPDPLEKLILENFEEAEDWRAKSTTPLGETKVLKMVQRGLIR
DVFDENTVPDNGGDQIEKNHILGVKTNYTVRGFDRVEVFPPHEYVVKGKARQLSIWALGRKFRHTLFAKLRDYRGNTHNI
RLGRLDYFGWRKLTATIPGFVPQSTRFALLDKNLHFVSLFVVSDVHEVGGQFYFYVDDLEVRADKSDAKYPGSEIKDNW

Sequences:

>Translated_239_residues
MRKKIILLAGLLCILAVPGVYSQQTGNNQAGGNQQTGANPDPLEKLILENFEEAEDWRAKSTTPLGETKVLKMVQRGLIR
DVFDENTVPDNGGDQIEKNHILGVKTNYTVRGFDRVEVFPPHEYVVKGKARQLSIWALGRKFRHTLFAKLRDYRGNTHNI
RLGRLDYFGWRKLTATIPGFVPQSTRFALLDKNLHFVSLFVVSDVHEVGGQFYFYVDDLEVRADKSDAKYPGSEIKDNW
>Mature_239_residues
MRKKIILLAGLLCILAVPGVYSQQTGNNQAGGNQQTGANPDPLEKLILENFEEAEDWRAKSTTPLGETKVLKMVQRGLIR
DVFDENTVPDNGGDQIEKNHILGVKTNYTVRGFDRVEVFPPHEYVVKGKARQLSIWALGRKFRHTLFAKLRDYRGNTHNI
RLGRLDYFGWRKLTATIPGFVPQSTRFALLDKNLHFVSLFVVSDVHEVGGQFYFYVDDLEVRADKSDAKYPGSEIKDNW

Specific function: Might be part of the flagella (Potential) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006714 [H]

Pfam domain/function: PF04620 FlaA [H]

EC number: NA

Molecular weight: Translated: 27180; Mature: 27180

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKKIILLAGLLCILAVPGVYSQQTGNNQAGGNQQTGANPDPLEKLILENFEEAEDWRAK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
STTPLGETKVLKMVQRGLIRDVFDENTVPDNGGDQIEKNHILGVKTNYTVRGFDRVEVFP
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEECCCEEEEEC
PHEYVVKGKARQLSIWALGRKFRHTLFAKLRDYRGNTHNIRLGRLDYFGWRKLTATIPGF
CHHHEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCC
VPQSTRFALLDKNLHFVSLFVVSDVHEVGGQFYFYVDDLEVRADKSDAKYPGSEIKDNW
CCCCCEEEEEECCCEEEEHHHHHHHHHHCCEEEEEEECEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRKKIILLAGLLCILAVPGVYSQQTGNNQAGGNQQTGANPDPLEKLILENFEEAEDWRAK
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
STTPLGETKVLKMVQRGLIRDVFDENTVPDNGGDQIEKNHILGVKTNYTVRGFDRVEVFP
CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCEEECCCEEEEEC
PHEYVVKGKARQLSIWALGRKFRHTLFAKLRDYRGNTHNIRLGRLDYFGWRKLTATIPGF
CHHHEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEEECCCC
VPQSTRFALLDKNLHFVSLFVVSDVHEVGGQFYFYVDDLEVRADKSDAKYPGSEIKDNW
CCCCCEEEEEECCCEEEEHHHHHHHHHHCCEEEEEEECEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA