Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
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Accession | NC_005823 |
Length | 4,277,185 |
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The map label for this gene is 45656670
Identifier: 45656670
GI number: 45656670
Start: 944446
End: 945276
Strand: Direct
Name: 45656670
Synonym: LIC10776
Alternate gene names: NA
Gene position: 944446-945276 (Clockwise)
Preceding gene: 45656669
Following gene: 45656671
Centisome position: 22.08
GC content: 36.1
Gene sequence:
>831_bases ATGATTTTTGCTCTCGTAAAAATTGGAGATCGTCCTTTTCCACCGGAACCATCTCCGCAAAATTTAACCTGGCAGTTATT GTTGATTGGGTTTGGTCTTGTAAATGGAATGGCGCTTGTATTCATACCTCTTGGAATGTATGGTTCTGTTTTTTTTACGA TTATTTGGCTTTTATTTTTATTTCTTCCTTTGCTTTTTTTAGTCATCCGTCTCAGCACAAAATTTGGTAACCTTCTCTAC ATTGCATTATTTTTAAGTCTTCTGTCGGCGGGGGTTTCTTCTCTTTATATCAGTCATACTATAGGATTTTTTTTAGGAAT TCCTGTAGGAAAAAACATGGATCTTTCACAAGGCGGTGAGTTTGGAAAAAATCGAATTTTAGTGTTTAGAGAAGTAAAAA TTCTTCCAGACTATATCTCTTCTAGATCTGCCATTAGCAAGTCAAAGGCGGAGCCACAGCTTACTAAGACGATTTACTTT CATGTTGCTCCATTAGTTTCGTCAACTTGGAAAAAGGGTGATCCAGTTCATGTTTGGGTCGCTTGTGAAAAAATGGAACT TCCGACTTGTAATTGGGGAAGTTCTGTCTTTTTTTGGGGTGAAAATTTAAAACATCATTCTTTATATCCTTATTACAAAC TTTCTGTTCAGGACGCGGGAAGAATCTATAAACTTACAGTTTCGGAATATCCTACAATTTTTAGGCCGATCGCAGATCCA GAAAAGAAACTCGTTCGAGCCGGAATGTATGGGCTGTCTGGACTTTTTTTTCTTAATTATTCTTGGTTCATTTGTATCTT TTTAGGTCAGTTTTTTGAAAAAAGAAAATGA
Upstream 100 bases:
>100_bases TCGTGGACTTTTGTTTTCCGTCTCAGGGCCGGAAGCGCAGACGGATCAAATTCGTCAAATCTGGTTGCAATTGAATCAAA AACTTATCGTCGAATGAATC
Downstream 100 bases:
>100_bases GTTTTTAATTTATATTTTTTGAATATTATATTTTTTTGTAAAAGTCTTTTTTTCAAAAATTTAAAGTATTATTTTTTATA CATTTTTGTAGCAAAAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MIFALVKIGDRPFPPEPSPQNLTWQLLLIGFGLVNGMALVFIPLGMYGSVFFTIIWLLFLFLPLLFLVIRLSTKFGNLLY IALFLSLLSAGVSSLYISHTIGFFLGIPVGKNMDLSQGGEFGKNRILVFREVKILPDYISSRSAISKSKAEPQLTKTIYF HVAPLVSSTWKKGDPVHVWVACEKMELPTCNWGSSVFFWGENLKHHSLYPYYKLSVQDAGRIYKLTVSEYPTIFRPIADP EKKLVRAGMYGLSGLFFLNYSWFICIFLGQFFEKRK
Sequences:
>Translated_276_residues MIFALVKIGDRPFPPEPSPQNLTWQLLLIGFGLVNGMALVFIPLGMYGSVFFTIIWLLFLFLPLLFLVIRLSTKFGNLLY IALFLSLLSAGVSSLYISHTIGFFLGIPVGKNMDLSQGGEFGKNRILVFREVKILPDYISSRSAISKSKAEPQLTKTIYF HVAPLVSSTWKKGDPVHVWVACEKMELPTCNWGSSVFFWGENLKHHSLYPYYKLSVQDAGRIYKLTVSEYPTIFRPIADP EKKLVRAGMYGLSGLFFLNYSWFICIFLGQFFEKRK >Mature_276_residues MIFALVKIGDRPFPPEPSPQNLTWQLLLIGFGLVNGMALVFIPLGMYGSVFFTIIWLLFLFLPLLFLVIRLSTKFGNLLY IALFLSLLSAGVSSLYISHTIGFFLGIPVGKNMDLSQGGEFGKNRILVFREVKILPDYISSRSAISKSKAEPQLTKTIYF HVAPLVSSTWKKGDPVHVWVACEKMELPTCNWGSSVFFWGENLKHHSLYPYYKLSVQDAGRIYKLTVSEYPTIFRPIADP EKKLVRAGMYGLSGLFFLNYSWFICIFLGQFFEKRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31394; Mature: 31394
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFALVKIGDRPFPPEPSPQNLTWQLLLIGFGLVNGMALVFIPLGMYGSVFFTIIWLLFL CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHH FLPLLFLVIRLSTKFGNLLYIALFLSLLSAGVSSLYISHTIGFFLGIPVGKNMDLSQGGE HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC FGKNRILVFREVKILPDYISSRSAISKSKAEPQLTKTIYFHVAPLVSSTWKKGDPVHVWV CCCCEEEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE ACEKMELPTCNWGSSVFFWGENLKHHSLYPYYKLSVQDAGRIYKLTVSEYPTIFRPIADP EEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHCCCCCH EKKLVRAGMYGLSGLFFLNYSWFICIFLGQFFEKRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIFALVKIGDRPFPPEPSPQNLTWQLLLIGFGLVNGMALVFIPLGMYGSVFFTIIWLLFL CEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHH FLPLLFLVIRLSTKFGNLLYIALFLSLLSAGVSSLYISHTIGFFLGIPVGKNMDLSQGGE HHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC FGKNRILVFREVKILPDYISSRSAISKSKAEPQLTKTIYFHVAPLVSSTWKKGDPVHVWV CCCCEEEEEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEE ACEKMELPTCNWGSSVFFWGENLKHHSLYPYYKLSVQDAGRIYKLTVSEYPTIFRPIADP EEECCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCCCHHHCCCCCH EKKLVRAGMYGLSGLFFLNYSWFICIFLGQFFEKRK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA