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The map label for this gene is 45656664

Identifier: 45656664

GI number: 45656664

Start: 936410

End: 937237

Strand: Direct

Name: 45656664

Synonym: LIC10770

Alternate gene names: NA

Gene position: 936410-937237 (Clockwise)

Preceding gene: 45656663

Following gene: 45656665

Centisome position: 21.89

GC content: 34.54

Gene sequence:

>828_bases
GTGTATTGTAAATTTCAACATAAACAGTATCAATTCGAAGGGATTTCGGAGGGAGGTATTCGTACTTCCTTGTATCTTCC
TTCCTTAAGTTTGATGTTTGACATTGGGGCTCAGAATCCTAATCGGATTCATCTGGATAATTTGTTGTTGACTCATTCTC
ATTTGGATCATTCCTGCGGATTACCTTATTATATATCTCAAAGGTCTTTGAGAAAACTAAAATCACCTAAAATTTTTGTT
CCAGCTCCTTTAAAAGAACCGATGCAAAAGATTTTGGATCTTTATTCTGAGATCGAAAATTTTACTTACGCATATGAACT
CAATGCGGTAAGCCCGGGAGATAAAATCGATTTAGATTCAAATCATTTTTTTTCTCCTCATCAAACTTTTCATAGGGTTC
CTTCTCAAGGATATACTTTGTATCAGAAGAGAAAAAAATTGAAAAAGGAATTTCAATCTATTTCTCAGAACGAACTCAAC
CAAGCCTTAAAGGAAAAAATAGAAGTCTCTGAGTTGAGTGAAATTCCGGTGATCAGTTTTTCGGGGGACACAAAGATAGA
ATACGTTTTGGAACACGAAGACGTTGCAAACTCTAGTATTCTATTTATTGAATGTACTTATATAGATAACGAACGAAACG
TGGCTCAGGCAAGGGAATGGGGACATACTCATCTGGATGAGATCTTAAATAATCTTTCTTCGTTTAAAAACGAAAAAATT
GTACTCATTCATTTTTCAAAACGTTATTCGGTTTCTTATATCCGAGAAGTTTTAGATAAAAGAATTCCGAAAGAAGAACG
ACATAGATTTCATCCGTTTTTGCCGTGA

Upstream 100 bases:

>100_bases
TAAGCTCTTCTGTTAAAACGATTTTGACCGGTCCAAAAAACATTACAAAAGGTTTAAATGAATCCGTAAAACACATTACG
CCAGAAGAAAGGATTCCTTA

Downstream 100 bases:

>100_bases
GTAAAGGAAGTCCTCCCGGCAAATACGGGACCTCGATTTTTCTGAACGGTCTGGAAGAGAAAATAGATTCCGATTTGATT
CCACGTCCGATTGAAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Metallo-Beta-Lactamase; Ribonuclease Z Family Protein; Metallo-Beta-Lactamase Superfamily; Ribonuclease Z; Metallo-Hydrolase/Oxidoreductase; Metallo-Beta-Lactamase Superfamily Protein; RNAse Z

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MYCKFQHKQYQFEGISEGGIRTSLYLPSLSLMFDIGAQNPNRIHLDNLLLTHSHLDHSCGLPYYISQRSLRKLKSPKIFV
PAPLKEPMQKILDLYSEIENFTYAYELNAVSPGDKIDLDSNHFFSPHQTFHRVPSQGYTLYQKRKKLKKEFQSISQNELN
QALKEKIEVSELSEIPVISFSGDTKIEYVLEHEDVANSSILFIECTYIDNERNVAQAREWGHTHLDEILNNLSSFKNEKI
VLIHFSKRYSVSYIREVLDKRIPKEERHRFHPFLP

Sequences:

>Translated_275_residues
MYCKFQHKQYQFEGISEGGIRTSLYLPSLSLMFDIGAQNPNRIHLDNLLLTHSHLDHSCGLPYYISQRSLRKLKSPKIFV
PAPLKEPMQKILDLYSEIENFTYAYELNAVSPGDKIDLDSNHFFSPHQTFHRVPSQGYTLYQKRKKLKKEFQSISQNELN
QALKEKIEVSELSEIPVISFSGDTKIEYVLEHEDVANSSILFIECTYIDNERNVAQAREWGHTHLDEILNNLSSFKNEKI
VLIHFSKRYSVSYIREVLDKRIPKEERHRFHPFLP
>Mature_275_residues
MYCKFQHKQYQFEGISEGGIRTSLYLPSLSLMFDIGAQNPNRIHLDNLLLTHSHLDHSCGLPYYISQRSLRKLKSPKIFV
PAPLKEPMQKILDLYSEIENFTYAYELNAVSPGDKIDLDSNHFFSPHQTFHRVPSQGYTLYQKRKKLKKEFQSISQNELN
QALKEKIEVSELSEIPVISFSGDTKIEYVLEHEDVANSSILFIECTYIDNERNVAQAREWGHTHLDEILNNLSSFKNEKI
VLIHFSKRYSVSYIREVLDKRIPKEERHRFHPFLP

Specific function: Unknown

COG id: COG1234

COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32232; Mature: 32232

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCKFQHKQYQFEGISEGGIRTSLYLPSLSLMFDIGAQNPNRIHLDNLLLTHSHLDHSCG
CCCCCCCCEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCEEEHHHEEEECCCCCCCCC
LPYYISQRSLRKLKSPKIFVPAPLKEPMQKILDLYSEIENFTYAYELNAVSPGDKIDLDS
CCCEECHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCC
NHFFSPHQTFHRVPSQGYTLYQKRKKLKKEFQSISQNELNQALKEKIEVSELSEIPVISF
CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
SGDTKIEYVLEHEDVANSSILFIECTYIDNERNVAQAREWGHTHLDEILNNLSSFKNEKI
CCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHCCCEE
VLIHFSKRYSVSYIREVLDKRIPKEERHRFHPFLP
EEEEECCCCCHHHHHHHHHHHCCHHHHHCCCCCCC
>Mature Secondary Structure
MYCKFQHKQYQFEGISEGGIRTSLYLPSLSLMFDIGAQNPNRIHLDNLLLTHSHLDHSCG
CCCCCCCCEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCEEEHHHEEEECCCCCCCCC
LPYYISQRSLRKLKSPKIFVPAPLKEPMQKILDLYSEIENFTYAYELNAVSPGDKIDLDS
CCCEECHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCC
NHFFSPHQTFHRVPSQGYTLYQKRKKLKKEFQSISQNELNQALKEKIEVSELSEIPVISF
CCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
SGDTKIEYVLEHEDVANSSILFIECTYIDNERNVAQAREWGHTHLDEILNNLSSFKNEKI
CCCCEEEEEEECCCCCCCEEEEEEEEEECCCCCHHHHHHCCHHHHHHHHHHHHHHCCCEE
VLIHFSKRYSVSYIREVLDKRIPKEERHRFHPFLP
EEEEECCCCCHHHHHHHHHHHCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA