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The map label for this gene is 45656300

Identifier: 45656300

GI number: 45656300

Start: 457309

End: 458136

Strand: Direct

Name: 45656300

Synonym: LIC10400

Alternate gene names: NA

Gene position: 457309-458136 (Clockwise)

Preceding gene: 45656297

Following gene: 45656301

Centisome position: 10.69

GC content: 34.18

Gene sequence:

>828_bases
ATGGAAGATGATTTTGATTTGTATGATCGAGTTGGTGAATGGACTGAGTTAAAATTAGAAATAGTCAAAAAATATGCGGA
AAGTTTTCAGGGGGCTTTGAAAAATTTAAATTTTAAAACCATTTATATTGATGGATTTTGTAATTCGGGAGAAGCAATTT
CGAAGAAAACTTCAGAGAAAATTGATGGTAGTGCTTTGAGGGCTCTAAAAGTTACACCACCATTTCATGAATATCATTTT
GTAGATCTTGAAGAAAAACGGGTTCACCATTTGCAAAGCCTTGTAAGTTCAGAAACTAACGCATATTTTCATATAGGAAA
TTCTAATAAAGTTCTTCCAGCAAAAGTATTTCCAAAGTTCCATTACGATAAGTATGAAAGAATATTTTGTCTTTTAGATC
CTTATAAACTGACTCTGGATTGGGATGTAGTAAAGGCAGCCGGAAAAAGTAAAATTACGGATGTGTTAATTAATTTTCCC
GTCCTTGATATGAATCGTAATGTTCTATGGAGCAATAATGAATCTATATCCGATAACAATCGAGAAAAAATGAATCGATT
TTGGGGGGACGACTCTTGGAAAGGAATTGTGTATTCCGAAGAAAATGATCTTTTTGGGCCGGTAACGGTAAGGAACGAAA
AACCTGTGCAGAAAATTTTGGAAGCATACGCTGATCGATTAAAAACAGTAGCTGGTTTTGCAGAAGTGGCTAAGCCTTTG
CCAATGAGAAATAGCGTCAACGCCATTGTCTATTATTTGATATTTGCCACGCAGAAGTCACTTGCAATCAAAATTATTAA
CTCTATTATGAAGAAATACCGAAAATAA

Upstream 100 bases:

>100_bases
AATTCGGAATAAAGTCTTTGAAGTATGATTTTATAATATTAAGTAATAAAAAATAATTAAATAATTCTATATAAATTACT
AATATACCGAATCTTAATAT

Downstream 100 bases:

>100_bases
ATTATGGGCGCTAAATCGAATATAGAATGGACAGAAGCTACATGGAATCCAGTAACTGGATGTACAAAAATAAGCGCAGG
TTGTGCAAATTGTTATGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MEDDFDLYDRVGEWTELKLEIVKKYAESFQGALKNLNFKTIYIDGFCNSGEAISKKTSEKIDGSALRALKVTPPFHEYHF
VDLEEKRVHHLQSLVSSETNAYFHIGNSNKVLPAKVFPKFHYDKYERIFCLLDPYKLTLDWDVVKAAGKSKITDVLINFP
VLDMNRNVLWSNNESISDNNREKMNRFWGDDSWKGIVYSEENDLFGPVTVRNEKPVQKILEAYADRLKTVAGFAEVAKPL
PMRNSVNAIVYYLIFATQKSLAIKIINSIMKKYRK

Sequences:

>Translated_275_residues
MEDDFDLYDRVGEWTELKLEIVKKYAESFQGALKNLNFKTIYIDGFCNSGEAISKKTSEKIDGSALRALKVTPPFHEYHF
VDLEEKRVHHLQSLVSSETNAYFHIGNSNKVLPAKVFPKFHYDKYERIFCLLDPYKLTLDWDVVKAAGKSKITDVLINFP
VLDMNRNVLWSNNESISDNNREKMNRFWGDDSWKGIVYSEENDLFGPVTVRNEKPVQKILEAYADRLKTVAGFAEVAKPL
PMRNSVNAIVYYLIFATQKSLAIKIINSIMKKYRK
>Mature_275_residues
MEDDFDLYDRVGEWTELKLEIVKKYAESFQGALKNLNFKTIYIDGFCNSGEAISKKTSEKIDGSALRALKVTPPFHEYHF
VDLEEKRVHHLQSLVSSETNAYFHIGNSNKVLPAKVFPKFHYDKYERIFCLLDPYKLTLDWDVVKAAGKSKITDVLINFP
VLDMNRNVLWSNNESISDNNREKMNRFWGDDSWKGIVYSEENDLFGPVTVRNEKPVQKILEAYADRLKTVAGFAEVAKPL
PMRNSVNAIVYYLIFATQKSLAIKIINSIMKKYRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31824; Mature: 31824

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDDFDLYDRVGEWTELKLEIVKKYAESFQGALKNLNFKTIYIDGFCNSGEAISKKTSEK
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH
IDGSALRALKVTPPFHEYHFVDLEEKRVHHLQSLVSSETNAYFHIGNSNKVLPAKVFPKF
CCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEHHHCCCC
HYDKYERIFCLLDPYKLTLDWDVVKAAGKSKITDVLINFPVLDMNRNVLWSNNESISDNN
CCCCCCEEEEEECCEEEEEEHHHHHHCCCHHHHHHHEECCEEECCCCEEECCCCCCCCCC
REKMNRFWGDDSWKGIVYSEENDLFGPVTVRNEKPVQKILEAYADRLKTVAGFAEVAKPL
HHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PMRNSVNAIVYYLIFATQKSLAIKIINSIMKKYRK
CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEDDFDLYDRVGEWTELKLEIVKKYAESFQGALKNLNFKTIYIDGFCNSGEAISKKTSEK
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH
IDGSALRALKVTPPFHEYHFVDLEEKRVHHLQSLVSSETNAYFHIGNSNKVLPAKVFPKF
CCCCCEEEEECCCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCEEEHHHCCCC
HYDKYERIFCLLDPYKLTLDWDVVKAAGKSKITDVLINFPVLDMNRNVLWSNNESISDNN
CCCCCCEEEEEECCEEEEEEHHHHHHCCCHHHHHHHEECCEEECCCCEEECCCCCCCCCC
REKMNRFWGDDSWKGIVYSEENDLFGPVTVRNEKPVQKILEAYADRLKTVAGFAEVAKPL
HHHHHHHCCCCCCCEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PMRNSVNAIVYYLIFATQKSLAIKIINSIMKKYRK
CCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA