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The map label for this gene is 45656165

Identifier: 45656165

GI number: 45656165

Start: 298484

End: 298837

Strand: Reverse

Name: 45656165

Synonym: LIC10260

Alternate gene names: NA

Gene position: 298837-298484 (Counterclockwise)

Preceding gene: 45656166

Following gene: 45656160

Centisome position: 6.99

GC content: 36.44

Gene sequence:

>354_bases
ATGAAAGTATTTCGAATCACTACTTTAACCTTAATTTTAATGATTCTTATCAGTTGTTCCCAAAATGTAAAACGAATCTC
TTATGTTTCCGTAGATAAACCCAAAGATGGAATTCTTTCCAACGAAAATAGATCTGTAGAGTTTGGGAAATTCCGATTCG
GAATCGTTTATATTCCTCCGGTAGGTGTACATCCATATTTAAAAGAAGCCGAAATGCAAAGCGGAAGCACAACACTCAGA
AACGTCGACGTCGTTATGCGACCCGGATTTTGTTTACTTCCTTTGATGCCGGTGGTTTGTTTTACTAGATACTCTATTAT
TGTAGAAAGTAATCCGGTTCAATCATCTCCTTAA

Upstream 100 bases:

>100_bases
CAGAAGTTACCCACTCCGCCAGTATGTTAGCACCTTTTAACTGTATTGCGGTCAAAGGATTTGCGCTTGATAGTTCCGAA
ATTCAAAAGGAAAATAAAAA

Downstream 100 bases:

>100_bases
TCAAATAAAACTTTAGAAACTTAGAACACTCTATAAAATCCAAAAATAACAATTTTAAAGATCAATTTCTACATAAAGTC
TCTGTTTGATGATCGCCAAT

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MKVFRITTLTLILMILISCSQNVKRISYVSVDKPKDGILSNENRSVEFGKFRFGIVYIPPVGVHPYLKEAEMQSGSTTLR
NVDVVMRPGFCLLPLMPVVCFTRYSIIVESNPVQSSP

Sequences:

>Translated_117_residues
MKVFRITTLTLILMILISCSQNVKRISYVSVDKPKDGILSNENRSVEFGKFRFGIVYIPPVGVHPYLKEAEMQSGSTTLR
NVDVVMRPGFCLLPLMPVVCFTRYSIIVESNPVQSSP
>Mature_117_residues
MKVFRITTLTLILMILISCSQNVKRISYVSVDKPKDGILSNENRSVEFGKFRFGIVYIPPVGVHPYLKEAEMQSGSTTLR
NVDVVMRPGFCLLPLMPVVCFTRYSIIVESNPVQSSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13154; Mature: 13154

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVFRITTLTLILMILISCSQNVKRISYVSVDKPKDGILSNENRSVEFGKFRFGIVYIPP
CEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCEEEEEEEECC
VGVHPYLKEAEMQSGSTTLRNVDVVMRPGFCLLPLMPVVCFTRYSIIVESNPVQSSP
CCCCCCHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHEEEEEECCCCCCCC
>Mature Secondary Structure
MKVFRITTLTLILMILISCSQNVKRISYVSVDKPKDGILSNENRSVEFGKFRFGIVYIPP
CEEEEHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCEEECCEEEEEEEECC
VGVHPYLKEAEMQSGSTTLRNVDVVMRPGFCLLPLMPVVCFTRYSIIVESNPVQSSP
CCCCCCHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA