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The map label for this gene is sopA [C]

Identifier: 45656125

GI number: 45656125

Start: 249230

End: 250006

Strand: Reverse

Name: sopA [C]

Synonym: LIC10220

Alternate gene names: 45656125

Gene position: 250006-249230 (Counterclockwise)

Preceding gene: 45656128

Following gene: 45656124

Centisome position: 5.85

GC content: 38.48

Gene sequence:

>777_bases
ATGAAACAGATCCTCTGTATAGCAAACCAGAAAGGTGGAGTAGGCAAAACAACCACTGCGGTACATCTCGCTTTTGGACT
CGCGCTCAAAAAAGAGAGAGTAATTCTTTTAGATTTAGATGCACAGGGAAACGCAACCTCTGTTTTTATTAAGGAGAATT
CTTATTCCTTCCACTCAGAAGAAGGAAGAGAAAAAAGTCTTTATAAAATTTTTAGAGATGGTGGGGACCTACGAGAAGTC
TTAATTCCGACTCGAATCCAAGGTTTAAAGATTGCCCCTTCTCATCCTTCTCTTGCAGAAGTCGATGTAATGCTTTCCGG
AAAGATAGATGGTTTTTTTCAACTTAGGGATTCCCTGGAATTAATCAAAGATGATTTCGATTATGTGATTATAGATTGTC
CACCAAGCCTTTCTATGATCACTCTTAACGCTTTTGTAGCTTCTACAGGTTTACTTGTCCCATTACAGGTTTCCAAATTT
TCTCTAGATGGAATTGAAGCCATTTTAGAAGCACATAAGAATACCGTAAAACGATTCAATCCTTCTCTAAAAGTTTTAGG
AGCCGTGCTAACTATGTTCAACCCTAGAACCACACTTTCCCAAACTCTCGAACCGATGATTGAACCCTATTTAAAATTAT
TTTCATCCAGAATTCCACCTTCAGTCAGCGTGGAAGAAGCTCATATGATGAAACAAACTCTCTTCGAATATCAACCAAAA
GGTAAAGCGGCACAATCTTATCAAAGTTTTGTGGAAGAGGTTTTGGAGCTTGGCTAA

Upstream 100 bases:

>100_bases
TCCGGATTGTCATCCTAAACAGATCGAGGAATCTATCCTTAATCCAACGATCTCTAAATGTAGTCTGAGGAAAGCGGAAT
TTACGGGCAACGGATTTTTT

Downstream 100 bases:

>100_bases
AAAGGATCTTTTAAAGCAAGCAGCGGGCGCACACGTCCGAAAAACGTTAGGCGGAGAAGCCAAAGAAGAACAAATTCCCT
CCAATCAAAAAGAAGTTCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MKQILCIANQKGGVGKTTTAVHLAFGLALKKERVILLDLDAQGNATSVFIKENSYSFHSEEGREKSLYKIFRDGGDLREV
LIPTRIQGLKIAPSHPSLAEVDVMLSGKIDGFFQLRDSLELIKDDFDYVIIDCPPSLSMITLNAFVASTGLLVPLQVSKF
SLDGIEAILEAHKNTVKRFNPSLKVLGAVLTMFNPRTTLSQTLEPMIEPYLKLFSSRIPPSVSVEEAHMMKQTLFEYQPK
GKAAQSYQSFVEEVLELG

Sequences:

>Translated_258_residues
MKQILCIANQKGGVGKTTTAVHLAFGLALKKERVILLDLDAQGNATSVFIKENSYSFHSEEGREKSLYKIFRDGGDLREV
LIPTRIQGLKIAPSHPSLAEVDVMLSGKIDGFFQLRDSLELIKDDFDYVIIDCPPSLSMITLNAFVASTGLLVPLQVSKF
SLDGIEAILEAHKNTVKRFNPSLKVLGAVLTMFNPRTTLSQTLEPMIEPYLKLFSSRIPPSVSVEEAHMMKQTLFEYQPK
GKAAQSYQSFVEEVLELG
>Mature_258_residues
MKQILCIANQKGGVGKTTTAVHLAFGLALKKERVILLDLDAQGNATSVFIKENSYSFHSEEGREKSLYKIFRDGGDLREV
LIPTRIQGLKIAPSHPSLAEVDVMLSGKIDGFFQLRDSLELIKDDFDYVIIDCPPSLSMITLNAFVASTGLLVPLQVSKF
SLDGIEAILEAHKNTVKRFNPSLKVLGAVLTMFNPRTTLSQTLEPMIEPYLKLFSSRIPPSVSVEEAHMMKQTLFEYQPK
GKAAQSYQSFVEEVLELG

Specific function: This Protein Is Essential For Plasmid Partition. It Ensures The Proper Distribution Of Newly Replicated Plasmids To Daughter Cells During Cell Division. Sopa Is Trans-Acting. [C]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis soj [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 28608; Mature: 28608

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQILCIANQKGGVGKTTTAVHLAFGLALKKERVILLDLDAQGNATSVFIKENSYSFHSE
CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCCC
EGREKSLYKIFRDGGDLREVLIPTRIQGLKIAPSHPSLAEVDVMLSGKIDGFFQLRDSLE
CCHHHHHHHHHHCCCCHHHHHCCCCCCCEEECCCCCCCEEEEEEEECCCCHHHHHHHHHH
LIKDDFDYVIIDCPPSLSMITLNAFVASTGLLVPLQVSKFSLDGIEAILEAHKNTVKRFN
HHHCCCCEEEEECCCCCCEEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHC
PSLKVLGAVLTMFNPRTTLSQTLEPMIEPYLKLFSSRIPPSVSVEEAHMMKQTLFEYQPK
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
GKAAQSYQSFVEEVLELG
CCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQILCIANQKGGVGKTTTAVHLAFGLALKKERVILLDLDAQGNATSVFIKENSYSFHSE
CCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCCCCCC
EGREKSLYKIFRDGGDLREVLIPTRIQGLKIAPSHPSLAEVDVMLSGKIDGFFQLRDSLE
CCHHHHHHHHHHCCCCHHHHHCCCCCCCEEECCCCCCCEEEEEEEECCCCHHHHHHHHHH
LIKDDFDYVIIDCPPSLSMITLNAFVASTGLLVPLQVSKFSLDGIEAILEAHKNTVKRFN
HHHCCCCEEEEECCCCCCEEEHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHC
PSLKVLGAVLTMFNPRTTLSQTLEPMIEPYLKLFSSRIPPSVSVEEAHMMKQTLFEYQPK
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCC
GKAAQSYQSFVEEVLELG
CCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12534463 [H]