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The map label for this gene is 45656106

Identifier: 45656106

GI number: 45656106

Start: 229825

End: 230883

Strand: Reverse

Name: 45656106

Synonym: LIC10201

Alternate gene names: NA

Gene position: 230883-229825 (Counterclockwise)

Preceding gene: 45656107

Following gene: 45656105

Centisome position: 5.4

GC content: 32.01

Gene sequence:

>1059_bases
ATGAAAGTTTATCAACACGTCACCGAATTTAAAGACGGAGACGGGATCGGAAACGATATTAAAGGGATTCGAAACGTTTT
CGAAAAAATAGGCGTTTCCAGCTCGATTATATGTCTAAAAAATTTTTCTAAAGAACCATTCTCTATTGAAGTTCACCCTA
CTACATTACGTTTTTCTCCAAATGACATTCATATATTAAACTATGGAGGTTGTGGTTATCCACTAGATTGGTTTAGAAAT
TTACCCGGAAAAAAAATAGTTCGTTATCAGAGTTTTACTCCAGCAATCTATTTTAAGAATTTCTTAAGTCCCGAAATTTA
CAACACACTTCAACTTGAAGAAAAACGTTCTCTGTTAGAGCTCTATTCTCTCAAAAACGAAACGGATCTATTTTTACCTT
CTTCCGAATTCAACGTAAATTTTTTACGATCTTTACAAATTACAAATACCTTTGTTCTTCCAATTGTCAAAAAATATCCC
ATTCGAGAAACGATAATAAAAGATAAAAAGGAATTTACGATTGGTTTTATTGGTAGAATTTCTCCAAATAAAAAAATCGA
AGATCTTTTAACACTTTTAGAATCGATTTTAAAAATCAGACAAAACGTTCAACTTTTGATTTGTGGAAATGTCTCTTCAA
TTTTTAAAGAATATTATAATTTTCTTAAAAAGAATATTTTATTTAAGCGACTAATGGAAAACGTTCAAATCCGTTTAGGT
TCAAGTGATACGGAAATAAATTCTTTTCTAAATTCTATGGATTTATATGTCTGTATGAGCGAACACGAAGGTTTTAACAT
TCCAGTTTTGGACGCATTTGGAGCCGGAATCCCAGTAATTTCTTATTGTGCGGGAGCAACTCCCGAAACGATGAAAACCG
GAGGAATTATTTTCAAAGATAAATCTTCTTCCTCCATAAATCTACTTGCCTTTTTGATCGACAACCTTTTGGAAAAAAAG
TCTTTACGCCAACAGATCTCTGACAAGGAACAGGAAATCGCTCAAGAGTATAATTTTTTTCCATTCGAAAGTTTTTTTAG
AGAGAAAATCCTAGCATGA

Upstream 100 bases:

>100_bases
TTCAAGAACCTTTGATCCGAGATTATCTCAAACAACTTGGTTTTAGAAATATTATAGAAAAAAAATCAGAAGACGGTTTT
ACCGTTCTTTCGTTTCGAAA

Downstream 100 bases:

>100_bases
AAGAGATTCATCAATTTTCTGCGGGTTTTAATCCGGGTGATGCGATTAGCAATCAGATGCTTGAAATTCGCAATCACTTA
AAAAATTTTGAATATAAAGG

Product: glycosyl transferase

Products: NA

Alternate protein names: Group 1 Glycosyl Transferase; Group 1 Family Glycosyl Transferase; Glycosyl Transferase

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MKVYQHVTEFKDGDGIGNDIKGIRNVFEKIGVSSSIICLKNFSKEPFSIEVHPTTLRFSPNDIHILNYGGCGYPLDWFRN
LPGKKIVRYQSFTPAIYFKNFLSPEIYNTLQLEEKRSLLELYSLKNETDLFLPSSEFNVNFLRSLQITNTFVLPIVKKYP
IRETIIKDKKEFTIGFIGRISPNKKIEDLLTLLESILKIRQNVQLLICGNVSSIFKEYYNFLKKNILFKRLMENVQIRLG
SSDTEINSFLNSMDLYVCMSEHEGFNIPVLDAFGAGIPVISYCAGATPETMKTGGIIFKDKSSSSINLLAFLIDNLLEKK
SLRQQISDKEQEIAQEYNFFPFESFFREKILA

Sequences:

>Translated_352_residues
MKVYQHVTEFKDGDGIGNDIKGIRNVFEKIGVSSSIICLKNFSKEPFSIEVHPTTLRFSPNDIHILNYGGCGYPLDWFRN
LPGKKIVRYQSFTPAIYFKNFLSPEIYNTLQLEEKRSLLELYSLKNETDLFLPSSEFNVNFLRSLQITNTFVLPIVKKYP
IRETIIKDKKEFTIGFIGRISPNKKIEDLLTLLESILKIRQNVQLLICGNVSSIFKEYYNFLKKNILFKRLMENVQIRLG
SSDTEINSFLNSMDLYVCMSEHEGFNIPVLDAFGAGIPVISYCAGATPETMKTGGIIFKDKSSSSINLLAFLIDNLLEKK
SLRQQISDKEQEIAQEYNFFPFESFFREKILA
>Mature_352_residues
MKVYQHVTEFKDGDGIGNDIKGIRNVFEKIGVSSSIICLKNFSKEPFSIEVHPTTLRFSPNDIHILNYGGCGYPLDWFRN
LPGKKIVRYQSFTPAIYFKNFLSPEIYNTLQLEEKRSLLELYSLKNETDLFLPSSEFNVNFLRSLQITNTFVLPIVKKYP
IRETIIKDKKEFTIGFIGRISPNKKIEDLLTLLESILKIRQNVQLLICGNVSSIFKEYYNFLKKNILFKRLMENVQIRLG
SSDTEINSFLNSMDLYVCMSEHEGFNIPVLDAFGAGIPVISYCAGATPETMKTGGIIFKDKSSSSINLLAFLIDNLLEKK
SLRQQISDKEQEIAQEYNFFPFESFFREKILA

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40484; Mature: 40484

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVYQHVTEFKDGDGIGNDIKGIRNVFEKIGVSSSIICLKNFSKEPFSIEVHPTTLRFSP
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECEEEEECC
NDIHILNYGGCGYPLDWFRNLPGKKIVRYQSFTPAIYFKNFLSPEIYNTLQLEEKRSLLE
CEEEEEECCCCCCCHHHHHCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
LYSLKNETDLFLPSSEFNVNFLRSLQITNTFVLPIVKKYPIRETIIKDKKEFTIGFIGRI
HHHCCCCCEEECCCCCCCHHHHHEEHHCCEEEEHHHHHCCCHHHHHCCCHHEEEEEEEEC
SPNKKIEDLLTLLESILKIRQNVQLLICGNVSSIFKEYYNFLKKNILFKRLMENVQIRLG
CCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
SSDTEINSFLNSMDLYVCMSEHEGFNIPVLDAFGAGIPVISYCAGATPETMKTGGIIFKD
CCCHHHHHHHHHCEEEEEEECCCCCCCCCHHHCCCCCHHHHHHCCCCCCHHHCCCEEEEC
KSSSSINLLAFLIDNLLEKKSLRQQISDKEQEIAQEYNFFPFESFFREKILA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MKVYQHVTEFKDGDGIGNDIKGIRNVFEKIGVSSSIICLKNFSKEPFSIEVHPTTLRFSP
CCHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEEEECEEEEECC
NDIHILNYGGCGYPLDWFRNLPGKKIVRYQSFTPAIYFKNFLSPEIYNTLQLEEKRSLLE
CEEEEEECCCCCCCHHHHHCCCCCCEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHHHH
LYSLKNETDLFLPSSEFNVNFLRSLQITNTFVLPIVKKYPIRETIIKDKKEFTIGFIGRI
HHHCCCCCEEECCCCCCCHHHHHEEHHCCEEEEHHHHHCCCHHHHHCCCHHEEEEEEEEC
SPNKKIEDLLTLLESILKIRQNVQLLICGNVSSIFKEYYNFLKKNILFKRLMENVQIRLG
CCCCHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC
SSDTEINSFLNSMDLYVCMSEHEGFNIPVLDAFGAGIPVISYCAGATPETMKTGGIIFKD
CCCHHHHHHHHHCEEEEEEECCCCCCCCCHHHCCCCCHHHHHHCCCCCCHHHCCCEEEEC
KSSSSINLLAFLIDNLLEKKSLRQQISDKEQEIAQEYNFFPFESFFREKILA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA