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The map label for this gene is 45656104

Identifier: 45656104

GI number: 45656104

Start: 227461

End: 228795

Strand: Reverse

Name: 45656104

Synonym: LIC10199

Alternate gene names: NA

Gene position: 228795-227461 (Counterclockwise)

Preceding gene: 45656105

Following gene: 45656101

Centisome position: 5.35

GC content: 32.51

Gene sequence:

>1335_bases
TTGAAATCATCTCTTAAAAAGATCGCGGTTGTTTGTCCGATTTTTTCGGACAAGGTTTCCGGAGGTTCGGAAAAACTTAT
CTTTCAATTTGTAGAATTATTAGCTTCGGATTTTGAAATCACCGTTTTGACTACTCGAAGTCTGGATTATATTTCTTGGA
AAAACTCAATTCCAATCCAATCCAAAGATCTATTTCAAGACGGTTCCAATCCTTCTAAACAAATCCATTTTGAAAAAAGA
TCTTCATCTTTAGGTGGAAGTTATAAAATTCTTCAATTTACTGTCGAAAAACAAAGAAATATAGATCGATTCAACCGTCT
TTCGAAAAAAATTTTAGAAAAACCTTCCCTACAAAATAAGGAAAACGTAAATTATTGGCTTCAAGAACAAGGTCCTTACG
TTCCGGAATTAATTCAATTTATCGAATTTAGAAAAAGTGAATATGATATTTTTTTCTTTGTAAGTTATCTTTATTATCCT
CTAGTTTTCGGATTACCTTTGGTCGAAGAAAAATCAATCGTTATTCCCACATTCCACGACGAAGCCCCGGCATATCTTCC
CATATATAAGGAAGTTCTAACCGACCGTAGTTCCTACTCTTTTAACACTCCAGAAGAATTGGAGGTTTTTCGAAACATCT
TAGGATTCAAACCTACTATATATTCAATTACTGGAATGAATCTGAATTTTGATCGATGGTCCAATTTTAAAGAGAATTCT
AATTTTTTAGAAAATTCCGAAACCGTCCATTCTTCAATTAAATCAAAATCCCCTAATTCGTCCGAAAATTCTCCTTTTTT
ACTCTACGTTGGTCGTGTAGATCAAGGAAAAGGTTTTTTGGAAATGGTGGAATGGTTTTTAGAATGGAAAACAAAATCGT
ATTTTCTACACACACTTAAAATCGCCGGTAAAATCATTTCTAAAATTCCTAAAAAAATATTAGAAAATCCGAATGTAGAA
TTTTTAGGGTTTGTAGAAGAAAATACCAAATTAAATCTTATAGAGAATTGTTCCTGTTTAATCAACTCTTCCCCTTTGGA
AAGTTTTTCCATTGTTCTTATGGAAGTTTGGTTAAAAGAAAAACCAGTTCTTGTTAATGCAAGATCGGACGTTCTCAAGG
GTCATTGTCTCAGAAGCAACGGTGGTCTTTTTTATTCCGATCGTAAAAGTTTTTTCGCCGCTTTGAACTTCATTTTGGAT
CATCCGATAGAATCCATTGAAATGGGTAAAAACGGTAAAAAATATGTAGAACAAAACTTCAATCCGAAAATCGTAAAAGA
TAAATTACTTCGATTGATCGAAAAAACGATTCAGAAAAAATATTCTGGTTCGTAA

Upstream 100 bases:

>100_bases
TTGACTGATGTTTCTTTCCAAAATCAAATTTTAACAGGCCAAGATCTACGTCTGAACGAATTTAAAAAAACGGATTATAA
ATCCGTCCTTAGGAAGGCAC

Downstream 100 bases:

>100_bases
TACTTCTTACAATTTCAAAACTTCCACCCAATTGTCTTCTCTGGGAAAACAAACAATTCCAGATGTTTTATAATTCATTA
TAAAATAAAGTTTAGAATAT

Product: glycosyltransferase

Products: NA

Alternate protein names: Group 1 Glycosyl Transferase; Hexosyltransferase; Glycosyl Transferase Family Protein; Glycosyl Transferase Group 1 Protein

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MKSSLKKIAVVCPIFSDKVSGGSEKLIFQFVELLASDFEITVLTTRSLDYISWKNSIPIQSKDLFQDGSNPSKQIHFEKR
SSSLGGSYKILQFTVEKQRNIDRFNRLSKKILEKPSLQNKENVNYWLQEQGPYVPELIQFIEFRKSEYDIFFFVSYLYYP
LVFGLPLVEEKSIVIPTFHDEAPAYLPIYKEVLTDRSSYSFNTPEELEVFRNILGFKPTIYSITGMNLNFDRWSNFKENS
NFLENSETVHSSIKSKSPNSSENSPFLLYVGRVDQGKGFLEMVEWFLEWKTKSYFLHTLKIAGKIISKIPKKILENPNVE
FLGFVEENTKLNLIENCSCLINSSPLESFSIVLMEVWLKEKPVLVNARSDVLKGHCLRSNGGLFYSDRKSFFAALNFILD
HPIESIEMGKNGKKYVEQNFNPKIVKDKLLRLIEKTIQKKYSGS

Sequences:

>Translated_444_residues
MKSSLKKIAVVCPIFSDKVSGGSEKLIFQFVELLASDFEITVLTTRSLDYISWKNSIPIQSKDLFQDGSNPSKQIHFEKR
SSSLGGSYKILQFTVEKQRNIDRFNRLSKKILEKPSLQNKENVNYWLQEQGPYVPELIQFIEFRKSEYDIFFFVSYLYYP
LVFGLPLVEEKSIVIPTFHDEAPAYLPIYKEVLTDRSSYSFNTPEELEVFRNILGFKPTIYSITGMNLNFDRWSNFKENS
NFLENSETVHSSIKSKSPNSSENSPFLLYVGRVDQGKGFLEMVEWFLEWKTKSYFLHTLKIAGKIISKIPKKILENPNVE
FLGFVEENTKLNLIENCSCLINSSPLESFSIVLMEVWLKEKPVLVNARSDVLKGHCLRSNGGLFYSDRKSFFAALNFILD
HPIESIEMGKNGKKYVEQNFNPKIVKDKLLRLIEKTIQKKYSGS
>Mature_444_residues
MKSSLKKIAVVCPIFSDKVSGGSEKLIFQFVELLASDFEITVLTTRSLDYISWKNSIPIQSKDLFQDGSNPSKQIHFEKR
SSSLGGSYKILQFTVEKQRNIDRFNRLSKKILEKPSLQNKENVNYWLQEQGPYVPELIQFIEFRKSEYDIFFFVSYLYYP
LVFGLPLVEEKSIVIPTFHDEAPAYLPIYKEVLTDRSSYSFNTPEELEVFRNILGFKPTIYSITGMNLNFDRWSNFKENS
NFLENSETVHSSIKSKSPNSSENSPFLLYVGRVDQGKGFLEMVEWFLEWKTKSYFLHTLKIAGKIISKIPKKILENPNVE
FLGFVEENTKLNLIENCSCLINSSPLESFSIVLMEVWLKEKPVLVNARSDVLKGHCLRSNGGLFYSDRKSFFAALNFILD
HPIESIEMGKNGKKYVEQNFNPKIVKDKLLRLIEKTIQKKYSGS

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51350; Mature: 51350

Theoretical pI: Translated: 9.05; Mature: 9.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSSLKKIAVVCPIFSDKVSGGSEKLIFQFVELLASDFEITVLTTRSLDYISWKNSIPIQ
CCCCCCCCEEECCCHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCCCCC
SKDLFQDGSNPSKQIHFEKRSSSLGGSYKILQFTVEKQRNIDRFNRLSKKILEKPSLQNK
CHHHHCCCCCCCCEEEEEHHCCCCCCCEEEEEEEEHHHCCHHHHHHHHHHHHCCCCCCCC
ENVNYWLQEQGPYVPELIQFIEFRKSEYDIFFFVSYLYYPLVFGLPLVEEKSIVIPTFHD
CCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
EAPAYLPIYKEVLTDRSSYSFNTPEELEVFRNILGFKPTIYSITGMNLNFDRWSNFKENS
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCC
NFLENSETVHSSIKSKSPNSSENSPFLLYVGRVDQGKGFLEMVEWFLEWKTKSYFLHTLK
CHHCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHH
IAGKIISKIPKKILENPNVEFLGFVEENTKLNLIENCSCLINSSPLESFSIVLMEVWLKE
HHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEHHHCCHHEECCCCCHHHHHHHHHHHHCC
KPVLVNARSDVLKGHCLRSNGGLFYSDRKSFFAALNFILDHPIESIEMGKNGKKYVEQNF
CCEEEECCHHHHCCEEEECCCCEEECCHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHCCC
NPKIVKDKLLRLIEKTIQKKYSGS
CCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKSSLKKIAVVCPIFSDKVSGGSEKLIFQFVELLASDFEITVLTTRSLDYISWKNSIPIQ
CCCCCCCCEEECCCHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCEEEECCCCCCCC
SKDLFQDGSNPSKQIHFEKRSSSLGGSYKILQFTVEKQRNIDRFNRLSKKILEKPSLQNK
CHHHHCCCCCCCCEEEEEHHCCCCCCCEEEEEEEEHHHCCHHHHHHHHHHHHCCCCCCCC
ENVNYWLQEQGPYVPELIQFIEFRKSEYDIFFFVSYLYYPLVFGLPLVEEKSIVIPTFHD
CCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
EAPAYLPIYKEVLTDRSSYSFNTPEELEVFRNILGFKPTIYSITGMNLNFDRWSNFKENS
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCC
NFLENSETVHSSIKSKSPNSSENSPFLLYVGRVDQGKGFLEMVEWFLEWKTKSYFLHTLK
CHHCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCHHHHHHHHH
IAGKIISKIPKKILENPNVEFLGFVEENTKLNLIENCSCLINSSPLESFSIVLMEVWLKE
HHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEHHHCCHHEECCCCCHHHHHHHHHHHHCC
KPVLVNARSDVLKGHCLRSNGGLFYSDRKSFFAALNFILDHPIESIEMGKNGKKYVEQNF
CCEEEECCHHHHCCEEEECCCCEEECCHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHCCC
NPKIVKDKLLRLIEKTIQKKYSGS
CCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA