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The map label for this gene is 45359035

Identifier: 45359035

GI number: 45359035

Start: 1432296

End: 1432967

Strand: Direct

Name: 45359035

Synonym: MMP1472

Alternate gene names: NA

Gene position: 1432296-1432967 (Clockwise)

Preceding gene: 45359034

Following gene: 45359036

Centisome position: 86.22

GC content: 36.01

Gene sequence:

>672_bases
TTGCAAAAACAAAGATTTTGCCTTGATACAACTGCAATTACTGATAGTGACGTTAGAAAATCGTTAGGTGTTTCAAATAT
TTCAGAATCTGCAGAAAAAATAATGGATATTATCGCACAGGCACGAGTACAGCTCGATATTTCATGCCATATTCCTTATG
ATACTGTTTATAAAGAACTTGTTGGTTTTTTAACTCGTGAAGGGTGTGCCCCTGAAACATTGATAAAAGTAGACACGTGG
CTTGTCAAAAAAACTCCAAATCGCTACGAAATAAAAATTCCTGCCGAAATATTTTATGAATATATAAAAGATTTAAGGGA
AAGAATAAATAAAGGGATGAGAATAAGTGAAAACGCAATGTATGAAACAGCCTTGGAAGCATACATACTCTCAAAACCTG
ACGAAAAAGATAGGGAAGACGTTCTAAACGAGGTCCTGTCAAAAACAGTTAATAGTTTCAGAGTCAAATACCGAAATGCA
CTTCGAGGAGGTACACTTGACAGTGCCCCTGACTTAGACGTTCTTTTGTTAGCAAAAGAGCTCGATGCAGCAGTTGTTGC
AAACGATGAAGGTATTGAAAAATGGGCTCAAAGACTTGGGCTTAGATTCGTCAACGCAAGAGATTTTCCATTCATACTTC
AAGAATATCTTGATTTATGGGATAAAAAGTAA

Upstream 100 bases:

>100_bases
AATAGAAAAGGAAACTATTTCAAAATACATTGAAAATTATCCGGCAAATTTAAGAATTTTAAACGGGATAAATAATCATG
AATAAAGGGGGTCGATAATT

Downstream 100 bases:

>100_bases
ATTTAGAATATTTTATAATTCTAAAACTTAAAACTACTAAAACACGGTGAGAAACATGGTACTCTTGATTATTAGAGGCG
ACAGCTACGAAAAAATAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MQKQRFCLDTTAITDSDVRKSLGVSNISESAEKIMDIIAQARVQLDISCHIPYDTVYKELVGFLTREGCAPETLIKVDTW
LVKKTPNRYEIKIPAEIFYEYIKDLRERINKGMRISENAMYETALEAYILSKPDEKDREDVLNEVLSKTVNSFRVKYRNA
LRGGTLDSAPDLDVLLLAKELDAAVVANDEGIEKWAQRLGLRFVNARDFPFILQEYLDLWDKK

Sequences:

>Translated_223_residues
MQKQRFCLDTTAITDSDVRKSLGVSNISESAEKIMDIIAQARVQLDISCHIPYDTVYKELVGFLTREGCAPETLIKVDTW
LVKKTPNRYEIKIPAEIFYEYIKDLRERINKGMRISENAMYETALEAYILSKPDEKDREDVLNEVLSKTVNSFRVKYRNA
LRGGTLDSAPDLDVLLLAKELDAAVVANDEGIEKWAQRLGLRFVNARDFPFILQEYLDLWDKK
>Mature_223_residues
MQKQRFCLDTTAITDSDVRKSLGVSNISESAEKIMDIIAQARVQLDISCHIPYDTVYKELVGFLTREGCAPETLIKVDTW
LVKKTPNRYEIKIPAEIFYEYIKDLRERINKGMRISENAMYETALEAYILSKPDEKDREDVLNEVLSKTVNSFRVKYRNA
LRGGTLDSAPDLDVLLLAKELDAAVVANDEGIEKWAQRLGLRFVNARDFPFILQEYLDLWDKK

Specific function: Unknown

COG id: COG1458

COG function: function code R; Predicted DNA-binding protein containing PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0278 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014856
- InterPro:   IPR022785 [H]

Pfam domain/function: PF08745 UPF0278 [H]

EC number: NA

Molecular weight: Translated: 25674; Mature: 25674

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKQRFCLDTTAITDSDVRKSLGVSNISESAEKIMDIIAQARVQLDISCHIPYDTVYKEL
CCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHH
VGFLTREGCAPETLIKVDTWLVKKTPNRYEIKIPAEIFYEYIKDLRERINKGMRISENAM
HHHHHHCCCCCHHHHHHHHHHEECCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHH
YETALEAYILSKPDEKDREDVLNEVLSKTVNSFRVKYRNALRGGTLDSAPDLDVLLLAKE
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
LDAAVVANDEGIEKWAQRLGLRFVNARDFPFILQEYLDLWDKK
HCHHEEECCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKQRFCLDTTAITDSDVRKSLGVSNISESAEKIMDIIAQARVQLDISCHIPYDTVYKEL
CCCCHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHH
VGFLTREGCAPETLIKVDTWLVKKTPNRYEIKIPAEIFYEYIKDLRERINKGMRISENAM
HHHHHHCCCCCHHHHHHHHHHEECCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCHHHH
YETALEAYILSKPDEKDREDVLNEVLSKTVNSFRVKYRNALRGGTLDSAPDLDVLLLAKE
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
LDAAVVANDEGIEKWAQRLGLRFVNARDFPFILQEYLDLWDKK
HCHHEEECCHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA