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The map label for this gene is pdfA [H]

Identifier: 45359033

GI number: 45359033

Start: 1430489

End: 1430923

Strand: Direct

Name: pdfA [H]

Synonym: MMP1470

Alternate gene names: 45359033

Gene position: 1430489-1430923 (Clockwise)

Preceding gene: 45359030

Following gene: 45359034

Centisome position: 86.12

GC content: 32.41

Gene sequence:

>435_bases
ATGAACGAAGAACTTCAAAACCAATTCATGGCACTCGATGTTTACAACCAGCAAGTTGATAAACTTAAAGAAGAACTTTC
AAACATTGATATGATGATAATGGAACTTTTGAGATCCATTGAATCTATGGAAGGCTTAAAAAGCTCCAAAGAAATTTTGT
TGCCTCTTGGTGCTGGTGCATTTATAAAAGCAGAAGCTCAAAACCCTGAAAAAATCGTTCTTTCAGTTGGAGTAGACGTT
TTACTTGAAAAGAATGTAGATGATGTAATAGTTGACTTCCAAAAAAGCGTTGAAGAACTTGAAAAAACAAAAGAGCTTGT
AAATAATCAAATTCAAAAAACAAATCAGGAAATTGTAAAATTAAGATCAGAACTTGAAAAAAGAGCTGCTGCAATTGAAC
AGAGAAGTGCTCAAATGAAACCTAAAACAAACTAA

Upstream 100 bases:

>100_bases
GAAGGCTCAGCTTTTTAAGATTTGAAAACAAAACACGATTTACTTTCAGAGTTTATGGTGTCCTAATTATAATCCAAAAT
TGTTATTAATGGTGATAAGA

Downstream 100 bases:

>100_bases
TTTTGACTAATTTTTAACTTTTAAATTAAATTTTAAAAATACACATTTTAAACAATCTATTCAAAAAAAGTTACAGTTCA
AACATTGCAATATATTTGAA

Product: prefoldin subunit alpha

Products: NA

Alternate protein names: GimC subunit alpha [H]

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MNEELQNQFMALDVYNQQVDKLKEELSNIDMMIMELLRSIESMEGLKSSKEILLPLGAGAFIKAEAQNPEKIVLSVGVDV
LLEKNVDDVIVDFQKSVEELEKTKELVNNQIQKTNQEIVKLRSELEKRAAAIEQRSAQMKPKTN

Sequences:

>Translated_144_residues
MNEELQNQFMALDVYNQQVDKLKEELSNIDMMIMELLRSIESMEGLKSSKEILLPLGAGAFIKAEAQNPEKIVLSVGVDV
LLEKNVDDVIVDFQKSVEELEKTKELVNNQIQKTNQEIVKLRSELEKRAAAIEQRSAQMKPKTN
>Mature_144_residues
MNEELQNQFMALDVYNQQVDKLKEELSNIDMMIMELLRSIESMEGLKSSKEILLPLGAGAFIKAEAQNPEKIVLSVGVDV
LLEKNVDDVIVDFQKSVEELEKTKELVNNQIQKTNQEIVKLRSELEKRAAAIEQRSAQMKPKTN

Specific function: Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding [H]

COG id: COG1730

COG function: function code O; Predicted prefoldin, molecular chaperone implicated in de novo protein folding

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prefoldin alpha subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011599
- InterPro:   IPR009053
- InterPro:   IPR004127 [H]

Pfam domain/function: PF02996 Prefoldin [H]

EC number: NA

Molecular weight: Translated: 16389; Mature: 16389

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEELQNQFMALDVYNQQVDKLKEELSNIDMMIMELLRSIESMEGLKSSKEILLPLGAGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
FIKAEAQNPEKIVLSVGVDVLLEKNVDDVIVDFQKSVEELEKTKELVNNQIQKTNQEIVK
EEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSELEKRAAAIEQRSAQMKPKTN
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNEELQNQFMALDVYNQQVDKLKEELSNIDMMIMELLRSIESMEGLKSSKEILLPLGAGA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC
FIKAEAQNPEKIVLSVGVDVLLEKNVDDVIVDFQKSVEELEKTKELVNNQIQKTNQEIVK
EEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRSELEKRAAAIEQRSAQMKPKTN
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA