Click here to switch to the map view.

The map label for this gene is 45359010

Identifier: 45359010

GI number: 45359010

Start: 1417426

End: 1418064

Strand: Direct

Name: 45359010

Synonym: MMP1447

Alternate gene names: NA

Gene position: 1417426-1418064 (Clockwise)

Preceding gene: 45359008

Following gene: 45359011

Centisome position: 85.33

GC content: 32.39

Gene sequence:

>639_bases
ATGTACGATAAATTAAAAATCATAGAAAGAGCTATTCTGCTCAATCCCGAAAATATAAAAGTATTTCGTGAAAAACTCAA
GATAACCCAGTCCAAACTTGCTGAAGAAAGTGGGGTTAGCCAATCTCACTTGAGTATGCTTGAAAAAGGGAAACGAGAAA
TTGGGGAAGCACATGCTGCCGCGATAACACTTGGAATGCTTAAATGTACTAATTTTTGGGATAAAGAAAATCCTATTTTA
TATTTATTAGACGTACTTTCACTCACAAAACTTGAAAGTGCTATTGTCGAATTTATCCAGGATTTAACGTCAAAAAACGA
TATCTTCTGTAAAAGATATATTGAAGGACATCCTGTATACATTATAGATATAAAATATTTTACTGAAGAAATTAAAAAAC
GACTCAGTGTCATGGACATTGAAGAAGTTGATTTTTTTAGAGGTAGAATGAATATTAGAGGATTACACCTCGATAAAAAG
ACTGTACTTATTCAATTGGATTGTTCAGACATTCGAAGGCTCGAAAATAAGGTATCTAAAGTACTAAATAATAAAACAGT
ACTTCAAATATTCCCCAAAGAGGAAGTTCCCCCAATATATTCTATAAAAAAAGACTGCATGATTGTACACTGCTGGTGA

Upstream 100 bases:

>100_bases
GGCTTGATTCAAGTAAAAAATTATATATACAAAATCCGCCCAGAATAATGTTATTCATAGGAAATAATTTTTCGATCCGA
TTACCTCAAAAAGTGGTAGA

Downstream 100 bases:

>100_bases
TTTTCATGGTTTTATTAATTAACTACGCAGTATCTTTGGTTTCTGCAATTGTAGTTGGAGCAGTTCTTGGCATGAAACTG
TCATTTGATATGGATTCCTT

Product: Cro repressor family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MYDKLKIIERAILLNPENIKVFREKLKITQSKLAEESGVSQSHLSMLEKGKREIGEAHAAAITLGMLKCTNFWDKENPIL
YLLDVLSLTKLESAIVEFIQDLTSKNDIFCKRYIEGHPVYIIDIKYFTEEIKKRLSVMDIEEVDFFRGRMNIRGLHLDKK
TVLIQLDCSDIRRLENKVSKVLNNKTVLQIFPKEEVPPIYSIKKDCMIVHCW

Sequences:

>Translated_212_residues
MYDKLKIIERAILLNPENIKVFREKLKITQSKLAEESGVSQSHLSMLEKGKREIGEAHAAAITLGMLKCTNFWDKENPIL
YLLDVLSLTKLESAIVEFIQDLTSKNDIFCKRYIEGHPVYIIDIKYFTEEIKKRLSVMDIEEVDFFRGRMNIRGLHLDKK
TVLIQLDCSDIRRLENKVSKVLNNKTVLQIFPKEEVPPIYSIKKDCMIVHCW
>Mature_212_residues
MYDKLKIIERAILLNPENIKVFREKLKITQSKLAEESGVSQSHLSMLEKGKREIGEAHAAAITLGMLKCTNFWDKENPIL
YLLDVLSLTKLESAIVEFIQDLTSKNDIFCKRYIEGHPVYIIDIKYFTEEIKKRLSVMDIEEVDFFRGRMNIRGLHLDKK
TVLIQLDCSDIRRLENKVSKVLNNKTVLQIFPKEEVPPIYSIKKDCMIVHCW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 24729; Mature: 24729

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDKLKIIERAILLNPENIKVFREKLKITQSKLAEESGVSQSHLSMLEKGKREIGEAHAA
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AITLGMLKCTNFWDKENPILYLLDVLSLTKLESAIVEFIQDLTSKNDIFCKRYIEGHPVY
HHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEE
IIDIKYFTEEIKKRLSVMDIEEVDFFRGRMNIRGLHLDKKTVLIQLDCSDIRRLENKVSK
EEEHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCEEEEEEECHHHHHHHHHHHHH
VLNNKTVLQIFPKEEVPPIYSIKKDCMIVHCW
HHCCCEEEEEECCCCCCCCCCCCCCEEEEEEC
>Mature Secondary Structure
MYDKLKIIERAILLNPENIKVFREKLKITQSKLAEESGVSQSHLSMLEKGKREIGEAHAA
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
AITLGMLKCTNFWDKENPILYLLDVLSLTKLESAIVEFIQDLTSKNDIFCKRYIEGHPVY
HHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEE
IIDIKYFTEEIKKRLSVMDIEEVDFFRGRMNIRGLHLDKKTVLIQLDCSDIRRLENKVSK
EEEHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEECCEEEEEEECHHHHHHHHHHHHH
VLNNKTVLQIFPKEEVPPIYSIKKDCMIVHCW
HHCCCEEEEEECCCCCCCCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]