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The map label for this gene is 45358940

Identifier: 45358940

GI number: 45358940

Start: 1357616

End: 1358683

Strand: Direct

Name: 45358940

Synonym: MMP1377

Alternate gene names: NA

Gene position: 1357616-1358683 (Clockwise)

Preceding gene: 45358939

Following gene: 45358941

Centisome position: 81.73

GC content: 29.21

Gene sequence:

>1068_bases
ATGAATTTAAAACTGAAAAACATAATTTACGTTACAATCATTGGAATTTTAGTATTTTCAACACTATTTCTTGTTCAAAA
TAATTTTGAAAGTTTAAATTTATCAAAAATACTTGAAAATGGCGGATTTAGTGGAAATGACGAAAATCTTCCAAAATATA
TCTTTGAAGATTCAATTGAAGTGTATTTATCCCCAAATGAACTTGAAAAAGTATCCAACGTTTCTAAATCATTAAATGGA
AATACCATTGAAGACTCCATCTGGAATATTGTACTTTGGGAAGAAGATAATATTGAATATAATCATGAAAAAGCAGAACT
CCCAAGTCCTGAAGTTACATACTGGGTTGGCGGAAGAACCGAAGTTTCTGATCCATATAATAATACAATACAAAGTCCTG
CAGAAACACTTGAATTAAAATCTGGAATCTGTGGAGATTATGCACTATTAACTTCTGCATTGCTTTTAGAAATGGATTAT
TCTCCGATATATATTTTAACATTTGAATCGACAGGAAATCCGGGTCACGCAGCCGCGGCAGTTGATATAAATGGTGATTA
CTACATTATCGACCAACAGCCCCCAATTATGGATTTATACAACTATTTAGATTATAAAAAAGATGTTGAAAATTATAATA
TCGATAACATCACATTTTACAAAATTGAACTTGTAAATGATTCAGTTTTTTATGAAAAAGATTTTGAATCTGTTGAAAGT
TACAGTGCAGTTTCAAATAAATACAGCGATATTGCGGGTTTTTCAAGATATTTGATGACAGATTTTGAAAACAATTACGA
AATAAAAAGTGACTATAATATTCAGTACTTAGATTCAATGGAATACCTTCCAAAAGCGTATGAAAAAGGAATTACAATTC
AGTATTTCTTTGAATTTGGAGGATACACTCCAATTTTTGAAAAACAGTATGCAAAATGGGCATTTGATTACATTAAAAAC
GATGAAAATGAAAGTAGATATAATATTTCAGAATACAGTTCCATCTGGATTAGGAGTTCATACGATGGAGAAAAACTTAA
ATTAATAATAAATCTGGCTAAAAAATAA

Upstream 100 bases:

>100_bases
CGCCTGAAGGGGTTTTATACGATTTTTCTAAAGAGCCTGAAAAAATAAAAGCAGAATCTGGCGAATAAACTAATTTATAT
TTTTTATTTTTGGTGTTTTT

Downstream 100 bases:

>100_bases
TTATTTAAAACTTTAATACTTTTTTTCGGCGTTATATAATAATATCTTTTAGTTTAGGGCATTCATATATATTGTACAAT
AAAAGTATTTCGATTTTTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MNLKLKNIIYVTIIGILVFSTLFLVQNNFESLNLSKILENGGFSGNDENLPKYIFEDSIEVYLSPNELEKVSNVSKSLNG
NTIEDSIWNIVLWEEDNIEYNHEKAELPSPEVTYWVGGRTEVSDPYNNTIQSPAETLELKSGICGDYALLTSALLLEMDY
SPIYILTFESTGNPGHAAAAVDINGDYYIIDQQPPIMDLYNYLDYKKDVENYNIDNITFYKIELVNDSVFYEKDFESVES
YSAVSNKYSDIAGFSRYLMTDFENNYEIKSDYNIQYLDSMEYLPKAYEKGITIQYFFEFGGYTPIFEKQYAKWAFDYIKN
DENESRYNISEYSSIWIRSSYDGEKLKLIINLAKK

Sequences:

>Translated_355_residues
MNLKLKNIIYVTIIGILVFSTLFLVQNNFESLNLSKILENGGFSGNDENLPKYIFEDSIEVYLSPNELEKVSNVSKSLNG
NTIEDSIWNIVLWEEDNIEYNHEKAELPSPEVTYWVGGRTEVSDPYNNTIQSPAETLELKSGICGDYALLTSALLLEMDY
SPIYILTFESTGNPGHAAAAVDINGDYYIIDQQPPIMDLYNYLDYKKDVENYNIDNITFYKIELVNDSVFYEKDFESVES
YSAVSNKYSDIAGFSRYLMTDFENNYEIKSDYNIQYLDSMEYLPKAYEKGITIQYFFEFGGYTPIFEKQYAKWAFDYIKN
DENESRYNISEYSSIWIRSSYDGEKLKLIINLAKK
>Mature_355_residues
MNLKLKNIIYVTIIGILVFSTLFLVQNNFESLNLSKILENGGFSGNDENLPKYIFEDSIEVYLSPNELEKVSNVSKSLNG
NTIEDSIWNIVLWEEDNIEYNHEKAELPSPEVTYWVGGRTEVSDPYNNTIQSPAETLELKSGICGDYALLTSALLLEMDY
SPIYILTFESTGNPGHAAAAVDINGDYYIIDQQPPIMDLYNYLDYKKDVENYNIDNITFYKIELVNDSVFYEKDFESVES
YSAVSNKYSDIAGFSRYLMTDFENNYEIKSDYNIQYLDSMEYLPKAYEKGITIQYFFEFGGYTPIFEKQYAKWAFDYIKN
DENESRYNISEYSSIWIRSSYDGEKLKLIINLAKK

Specific function: Unknown

COG id: COG1800

COG function: function code R; Predicted transglutaminase-like proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0252 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007562 [H]

Pfam domain/function: PF04473 DUF553 [H]

EC number: NA

Molecular weight: Translated: 41104; Mature: 41104

Theoretical pI: Translated: 4.04; Mature: 4.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKLKNIIYVTIIGILVFSTLFLVQNNFESLNLSKILENGGFSGNDENLPKYIFEDSIE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHHCCCCEE
VYLSPNELEKVSNVSKSLNGNTIEDSIWNIVLWEEDNIEYNHEKAELPSPEVTYWVGGRT
EEECCHHHHHHHHHHHHCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCC
EVSDPYNNTIQSPAETLELKSGICGDYALLTSALLLEMDYSPIYILTFESTGNPGHAAAA
CCCCCCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHEEECCCCEEEEEEECCCCCCCEEEE
VDINGDYYIIDQQPPIMDLYNYLDYKKDVENYNIDNITFYKIELVNDSVFYEKDFESVES
EEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEHHHHHHHHH
YSAVSNKYSDIAGFSRYLMTDFENNYEIKSDYNIQYLDSMEYLPKAYEKGITIQYFFEFG
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCHHHHHHHHHCCCEEEEEEECC
GYTPIFEKQYAKWAFDYIKNDENESRYNISEYSSIWIRSSYDGEKLKLIINLAKK
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCEEEEEECCCCCEEEEEEEECCC
>Mature Secondary Structure
MNLKLKNIIYVTIIGILVFSTLFLVQNNFESLNLSKILENGGFSGNDENLPKYIFEDSIE
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCHHHCCCCEE
VYLSPNELEKVSNVSKSLNGNTIEDSIWNIVLWEEDNIEYNHEKAELPSPEVTYWVGGRT
EEECCHHHHHHHHHHHHCCCCEECCCCEEEEEEECCCCCCCCCCCCCCCCCEEEEECCCC
EVSDPYNNTIQSPAETLELKSGICGDYALLTSALLLEMDYSPIYILTFESTGNPGHAAAA
CCCCCCCHHHCCHHHHHHHHCCCCCCHHHHHHHHHEEECCCCEEEEEEECCCCCCCEEEE
VDINGDYYIIDQQPPIMDLYNYLDYKKDVENYNIDNITFYKIELVNDSVFYEKDFESVES
EEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCEEEHHHHHHHHH
YSAVSNKYSDIAGFSRYLMTDFENNYEIKSDYNIQYLDSMEYLPKAYEKGITIQYFFEFG
HHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCEEEECCHHHHHHHHHCCCEEEEEEECC
GYTPIFEKQYAKWAFDYIKNDENESRYNISEYSSIWIRSSYDGEKLKLIINLAKK
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHCEEEEEECCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]