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The map label for this gene is yigC [C]

Identifier: 45358851

GI number: 45358851

Start: 1271031

End: 1272308

Strand: Direct

Name: yigC [C]

Synonym: MMP1288

Alternate gene names: 45358851

Gene position: 1271031-1272308 (Clockwise)

Preceding gene: 45358850

Following gene: 45358857

Centisome position: 76.52

GC content: 34.98

Gene sequence:

>1278_bases
ATGGTAAAAAACCTCGTAAATTCTATTGAAAAACTTGTTTTTGAAAAATCTACCAAAAAATTTGGAGTTTCAAGAATTTT
AAAAGAAAATGACGATAAACCAGTTTTTATTAAAGATGTAAATGGATACCCCGTCATTGGAAACTTGTGTACAAGAGAAG
TTATTGCAGAGAGTCTTGGCATTGAAAAAGAAGATTTAATGAAACACATGGTTGAATCCATGAACAATGAAAAAAATGGG
GAATTAATCGTTGATGAAAGTTTAGAAAAACTCTACATCGATGATGATTTAGAAAAAATTCACGATTACCCAATTCCAAC
ATACTACGGAAAAGATGCAGGACCCTACCTTACATCGGGAGTAGTTATTGTAAAAGATAAAGACGAAGGGGTAAACGCAT
CAATTCACAGGATTTTAGTCAGGCCAGATGGTAATTTAGCAATTCGAATGGTTGAACAAAGACACCTCCACTACATCTAC
AACAAAAATATCGGTAATGGCGAAGTAGATTGTGCAATTGTTATTGGAGTTCACCCTGCAGTTTTACTTGCAGCTTCAAC
CTCAGGAGATGTTTCATTTAATGAATTAAAATACGCTTCTGCATTAATAAATAAACCATTAAATTTAGTAAAATGTAAAA
CAGTTGATTTGGAAGTTCCAGAAGCAGAATTCATAATTGAAGGAAAAATAACGGCAGAAATGGTTGATGAAGGACCATTT
GTTGACATTACTGGAACATACGACGTTATAAGAAAACAGCCATTGATTAAAGTAACAGCACTTAGAAGAAAAGAAGATGC
AATATTTCATGCACTACTTCCCGGAGGAAGTGAACACAAACTCTTGATGGGCATACCTCAAGAACCAAGAATGTACAAAG
GAATCAGAAACACAGTTCCATCACTTAAAAATGTTGCTTTAACACAAGGAGGATGCTGCTGGTTAAATGCCGTTGTTTCA
ATCGATAAAAAAACTGAAGGCGATGGTAAAAACGCAATCCTTGCAGCACTTGCAGCACACCCAAGTTTAAAACACGTAAC
TGTTGTAGATGACGATATTAACATTTACGATGCAAACGATGTGGAATACGCGGTTGCCACAAGAGTTCAAAGCGACAAAG
ATATTATAATCATCCCCGGAGCTAAAGGATCATCTTTAGATCCATCAGCGGACCATAAAAATAAATTAACTGCAAAAATG
GGAATTGATGCTACAATGAGTTTGTTAAAAGGAAAAGAGGAATTTATTAGAGCAGAAGTTCCAAAAGATGATGAATAA

Upstream 100 bases:

>100_bases
AAGCAGGTTGAATGATACTGGCGAAAAATTAAGTAAAGAAATTGCTAGAAAAAAACGATAATATTTTTATTTTTGTTTAA
TTTACTTTTCAGGTGGTCAT

Downstream 100 bases:

>100_bases
CCTTAAAAAAACTTATACTTTTTTAAAAATTTTTATTTTGAAAAAAAATAGGAAATAACCAATTAATCTTTAATTAATTC
TTTTCCTTTTGTCACAACAA

Product: UbiD family decarboxylase

Products: 2-octaprenylphenol; CO2 [C]

Alternate protein names: NA

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MVKNLVNSIEKLVFEKSTKKFGVSRILKENDDKPVFIKDVNGYPVIGNLCTREVIAESLGIEKEDLMKHMVESMNNEKNG
ELIVDESLEKLYIDDDLEKIHDYPIPTYYGKDAGPYLTSGVVIVKDKDEGVNASIHRILVRPDGNLAIRMVEQRHLHYIY
NKNIGNGEVDCAIVIGVHPAVLLAASTSGDVSFNELKYASALINKPLNLVKCKTVDLEVPEAEFIIEGKITAEMVDEGPF
VDITGTYDVIRKQPLIKVTALRRKEDAIFHALLPGGSEHKLLMGIPQEPRMYKGIRNTVPSLKNVALTQGGCCWLNAVVS
IDKKTEGDGKNAILAALAAHPSLKHVTVVDDDINIYDANDVEYAVATRVQSDKDIIIIPGAKGSSLDPSADHKNKLTAKM
GIDATMSLLKGKEEFIRAEVPKDDE

Sequences:

>Translated_425_residues
MVKNLVNSIEKLVFEKSTKKFGVSRILKENDDKPVFIKDVNGYPVIGNLCTREVIAESLGIEKEDLMKHMVESMNNEKNG
ELIVDESLEKLYIDDDLEKIHDYPIPTYYGKDAGPYLTSGVVIVKDKDEGVNASIHRILVRPDGNLAIRMVEQRHLHYIY
NKNIGNGEVDCAIVIGVHPAVLLAASTSGDVSFNELKYASALINKPLNLVKCKTVDLEVPEAEFIIEGKITAEMVDEGPF
VDITGTYDVIRKQPLIKVTALRRKEDAIFHALLPGGSEHKLLMGIPQEPRMYKGIRNTVPSLKNVALTQGGCCWLNAVVS
IDKKTEGDGKNAILAALAAHPSLKHVTVVDDDINIYDANDVEYAVATRVQSDKDIIIIPGAKGSSLDPSADHKNKLTAKM
GIDATMSLLKGKEEFIRAEVPKDDE
>Mature_425_residues
MVKNLVNSIEKLVFEKSTKKFGVSRILKENDDKPVFIKDVNGYPVIGNLCTREVIAESLGIEKEDLMKHMVESMNNEKNG
ELIVDESLEKLYIDDDLEKIHDYPIPTYYGKDAGPYLTSGVVIVKDKDEGVNASIHRILVRPDGNLAIRMVEQRHLHYIY
NKNIGNGEVDCAIVIGVHPAVLLAASTSGDVSFNELKYASALINKPLNLVKCKTVDLEVPEAEFIIEGKITAEMVDEGPF
VDITGTYDVIRKQPLIKVTALRRKEDAIFHALLPGGSEHKLLMGIPQEPRMYKGIRNTVPSLKNVALTQGGCCWLNAVVS
IDKKTEGDGKNAILAALAAHPSLKHVTVVDDDINIYDANDVEYAVATRVQSDKDIIIIPGAKGSSLDPSADHKNKLTAKM
GIDATMSLLKGKEEFIRAEVPKDDE

Specific function: Unknown

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=322, Percent_Identity=30.7453416149068, Blast_Score=129, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6320748, Length=356, Percent_Identity=26.4044943820225, Blast_Score=79, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: NA

Molecular weight: Translated: 46839; Mature: 46839

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKNLVNSIEKLVFEKSTKKFGVSRILKENDDKPVFIKDVNGYPVIGNLCTREVIAESLG
CHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHC
IEKEDLMKHMVESMNNEKNGELIVDESLEKLYIDDDLEKIHDYPIPTYYGKDAGPYLTSG
CCHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCHHHHHCCCCCCCCCCCCCCEECCC
VVIVKDKDEGVNASIHRILVRPDGNLAIRMVEQRHLHYIYNKNIGNGEVDCAIVIGVHPA
EEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCEEEEEEEECCCE
VLLAASTSGDVSFNELKYASALINKPLNLVKCKTVDLEVPEAEFIIEGKITAEMVDEGPF
EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEECCEEEEECCCCCE
VDITGTYDVIRKQPLIKVTALRRKEDAIFHALLPGGSEHKLLMGIPQEPRMYKGIRNTVP
EEECCCHHHHHCCCCEEEEEHHCHHHCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHCC
SLKNVALTQGGCCWLNAVVSIDKKTEGDGKNAILAALAAHPSLKHVTVVDDDINIYDAND
HHHHEEECCCCCEEEEEEEEECCCCCCCCCHHEEEEECCCCCCCEEEEEECCCEEEECCC
VEYAVATRVQSDKDIIIIPGAKGSSLDPSADHKNKLTAKMGIDATMSLLKGKEEFIRAEV
CEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCHHHHEECC
PKDDE
CCCCC
>Mature Secondary Structure
MVKNLVNSIEKLVFEKSTKKFGVSRILKENDDKPVFIKDVNGYPVIGNLCTREVIAESLG
CHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEEEEECCCCCEEHHHHHHHHHHHHHC
IEKEDLMKHMVESMNNEKNGELIVDESLEKLYIDDDLEKIHDYPIPTYYGKDAGPYLTSG
CCHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCCHHHHHCCCCCCCCCCCCCCEECCC
VVIVKDKDEGVNASIHRILVRPDGNLAIRMVEQRHLHYIYNKNIGNGEVDCAIVIGVHPA
EEEEECCCCCCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCCCCEEEEEEEECCCE
VLLAASTSGDVSFNELKYASALINKPLNLVKCKTVDLEVPEAEFIIEGKITAEMVDEGPF
EEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEEEECCEEEEECCCCCE
VDITGTYDVIRKQPLIKVTALRRKEDAIFHALLPGGSEHKLLMGIPQEPRMYKGIRNTVP
EEECCCHHHHHCCCCEEEEEHHCHHHCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHCC
SLKNVALTQGGCCWLNAVVSIDKKTEGDGKNAILAALAAHPSLKHVTVVDDDINIYDAND
HHHHEEECCCCCEEEEEEEEECCCCCCCCCHHEEEEECCCCCCCEEEEEECCCEEEECCC
VEYAVATRVQSDKDIIIIPGAKGSSLDPSADHKNKLTAKMGIDATMSLLKGKEEFIRAEV
CEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHHHCCCHHHHEECC
PKDDE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 3-octaprenyl-4-hydroxybenzoate [C]

Specific reaction: 3-octaprenyl-4-hydroxybenzoate = 2-octaprenylphenol + CO2 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]