| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410295
Identifier: 41410295
GI number: 41410295
Start: 4666875
End: 4667786
Strand: Reverse
Name: 41410295
Synonym: MAP4197c
Alternate gene names: NA
Gene position: 4667786-4666875 (Counterclockwise)
Preceding gene: 41410304
Following gene: 41410292
Centisome position: 96.65
GC content: 70.83
Gene sequence:
>912_bases ATGACACGCACCGACCAAGACAGTTGGGACCTGGCCTCGAGCGTGGGCGCGACGGCGACGATGGTGGCCGCGGCCCGCGC GCTGGCCAGCACGGGCGAGCGCCCGATCATCAACGACCCGTTCGCCGCGCCGTTGGTGCGGGCGGTCGGCCTGGATTTCT TCCGCCGCCTGGTCGACGGCGAGGTGGCGCCCGCGGATCCGCAACGCGGGGAACGCGACCTGCAGCTGGAGACGGATTCG ATCGCGGTGCGCACCCGATTTTTCGACGACTTCTTCACCGGCGCCGCCCGGGACGGAATCCGCCAGTCGGTGATCCTGGC CGCCGGGCTGGACGCCCGCGCCTACCGGCTGGACTGGCCGGCCGGCGCCGTGGTGTACGAGGTCGACCAGCCCAAGGTGG TGGAGTTCAAGACCAACACCATGGCGGCGCTGGACGCCCGCCCGGCCGCGCAGCTGCGCACGGTCAGCATCGACCTGCGC GAGGACTGGCCGGAAGCATTGCGCGCCAACGGTTTTGACGTGACACAGCCGACGTCGTGGAGCGCGGAGGGCCTGCTGAT GTACCTGCCGCCGGAGGCACAGGACCGGCTGTTCGACAACATCACCGCCCTGAGCGCGCCCGGCAGCCGGCTGGCCACCG AATATCACCCGGACGCCACCGGCACGACGATGGCGCAGCGCGCGCAGGAGTTCAACGACCGGTGGGCCAGGGTGGGCTGC GACATCGACCTGTCCGGGCTGTTCTTCGACGGCGAGCGCAGCAACGTCGTCGAGTACCTGACCGGGCGCGGATGGCGGGT CAGCGCCCGGCCACGCCGGGACCTGTTCGACGACTACGGCCTGGCCTACCCCGAGGACGACGAGACGGCGCAGTTCCCCA ACATCGTCGCCGTGAGCGCCGAGTTGGGCTGA
Upstream 100 bases:
>100_bases GGTCCGGCCGGGTCCGGTCAGGGCCTTTCCAGGAAGCCGTAAGCCGCGGGGCGTACAGTGCGGATGAATCGTTGCATTTG CTAAGTAACTTGGGAGCAGC
Downstream 100 bases:
>100_bases CCGTCAGGCGGGTTTGGCGGCGGGCGCCCGGACGACCAGCGGGACGGCGGGGAAACACCACGCCATCTCGGTGCGCGACT TGCGCAGCGCGGCGGTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MTRTDQDSWDLASSVGATATMVAAARALASTGERPIINDPFAAPLVRAVGLDFFRRLVDGEVAPADPQRGERDLQLETDS IAVRTRFFDDFFTGAARDGIRQSVILAAGLDARAYRLDWPAGAVVYEVDQPKVVEFKTNTMAALDARPAAQLRTVSIDLR EDWPEALRANGFDVTQPTSWSAEGLLMYLPPEAQDRLFDNITALSAPGSRLATEYHPDATGTTMAQRAQEFNDRWARVGC DIDLSGLFFDGERSNVVEYLTGRGWRVSARPRRDLFDDYGLAYPEDDETAQFPNIVAVSAELG
Sequences:
>Translated_303_residues MTRTDQDSWDLASSVGATATMVAAARALASTGERPIINDPFAAPLVRAVGLDFFRRLVDGEVAPADPQRGERDLQLETDS IAVRTRFFDDFFTGAARDGIRQSVILAAGLDARAYRLDWPAGAVVYEVDQPKVVEFKTNTMAALDARPAAQLRTVSIDLR EDWPEALRANGFDVTQPTSWSAEGLLMYLPPEAQDRLFDNITALSAPGSRLATEYHPDATGTTMAQRAQEFNDRWARVGC DIDLSGLFFDGERSNVVEYLTGRGWRVSARPRRDLFDDYGLAYPEDDETAQFPNIVAVSAELG >Mature_302_residues TRTDQDSWDLASSVGATATMVAAARALASTGERPIINDPFAAPLVRAVGLDFFRRLVDGEVAPADPQRGERDLQLETDSI AVRTRFFDDFFTGAARDGIRQSVILAAGLDARAYRLDWPAGAVVYEVDQPKVVEFKTNTMAALDARPAAQLRTVSIDLRE DWPEALRANGFDVTQPTSWSAEGLLMYLPPEAQDRLFDNITALSAPGSRLATEYHPDATGTTMAQRAQEFNDRWARVGCD IDLSGLFFDGERSNVVEYLTGRGWRVSARPRRDLFDDYGLAYPEDDETAQFPNIVAVSAELG
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
COG id: COG3315
COG function: function code Q; O-Methyltransferase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y4197_MYCPA (Q73S79)
Other databases:
- EMBL: AE016958 - RefSeq: NP_963131.1 - ProteinModelPortal: Q73S79 - SMR: Q73S79 - EnsemblBacteria: EBMYCT00000039565 - GeneID: 2717764 - GenomeReviews: AE016958_GR - KEGG: mpa:MAP4197c - NMPDR: fig|262316.1.peg.4197 - GeneTree: EBGT00050000015698 - HOGENOM: HBG570783 - OMA: RLATEYH - ProtClustDB: CLSK703983 - InterPro: IPR011610 - InterPro: IPR007213 - TIGRFAMs: TIGR00027
Pfam domain/function: PF04072 LCM
EC number: NA
Molecular weight: Translated: 33357; Mature: 33226
Theoretical pI: Translated: 4.28; Mature: 4.28
Prosite motif: NA
Important sites: BINDING 129-129
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRTDQDSWDLASSVGATATMVAAARALASTGERPIINDPFAAPLVRAVGLDFFRRLVDG CCCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC EVAPADPQRGERDLQLETDSIAVRTRFFDDFFTGAARDGIRQSVILAAGLDARAYRLDWP CCCCCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECC AGAVVYEVDQPKVVEFKTNTMAALDARPAAQLRTVSIDLREDWPEALRANGFDVTQPTSW CCEEEEECCCCEEEEEECCCEEEECCCCCCEEEEEEEEHHHCCHHHHHCCCCCCCCCCCC SAEGLLMYLPPEAQDRLFDNITALSAPGSRLATEYHPDATGTTMAQRAQEFNDRWARVGC CCCCEEEECCCCHHHHHHHHHHHCCCCCHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCC DIDLSGLFFDGERSNVVEYLTGRGWRVSARPRRDLFDDYGLAYPEDDETAQFPNIVAVSA CEEECEEEECCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEE ELG CCC >Mature Secondary Structure TRTDQDSWDLASSVGATATMVAAARALASTGERPIINDPFAAPLVRAVGLDFFRRLVDG CCCCCCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC EVAPADPQRGERDLQLETDSIAVRTRFFDDFFTGAARDGIRQSVILAAGLDARAYRLDWP CCCCCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEECC AGAVVYEVDQPKVVEFKTNTMAALDARPAAQLRTVSIDLREDWPEALRANGFDVTQPTSW CCEEEEECCCCEEEEEECCCEEEECCCCCCEEEEEEEEHHHCCHHHHHCCCCCCCCCCCC SAEGLLMYLPPEAQDRLFDNITALSAPGSRLATEYHPDATGTTMAQRAQEFNDRWARVGC CCCCEEEECCCCHHHHHHHHHHHCCCCCHHCCCEECCCCCCHHHHHHHHHHHHHHHHCCC DIDLSGLFFDGERSNVVEYLTGRGWRVSARPRRDLFDDYGLAYPEDDETAQFPNIVAVSA CEEECEEEECCCHHHHHHHHCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCCCCEEEEEE ELG CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA