Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410218
Identifier: 41410218
GI number: 41410218
Start: 4591111
End: 4591716
Strand: Reverse
Name: 41410218
Synonym: MAP4120c
Alternate gene names: NA
Gene position: 4591716-4591111 (Counterclockwise)
Preceding gene: 41410225
Following gene: 41410217
Centisome position: 95.07
GC content: 70.79
Gene sequence:
>606_bases ATGCCCGCTCTCGCCCGTCCGGTGGCCGACGAACGCAGTGCCCTGTGCGAATTCCTGGCGTATCACCAAAGTGCCTACTT CGCGGTGTCGCACGGCCTGACCGACGGGCAGGCCCGCTCGGCGCCGTCGGTCAGCGCCTTGTCGATCGGCGGGCTGATCA AGCACGCCACCGGCATGCAACGCAGCTGGATGGCCCGCGTCGCCGCCGCGCCCGGCGCACCCCCGAAGGACACCCGCCCG TTCGAGCAGGTCGCCGCCGAGTTCGCCGACCAGCACGTGATGCGGCCCGACGAGACGCTGCAAGAGCTGCTGGACGCGTT CGAGGCCCAGAACGCCGAATCGCTGCGGCTGGCGCAGACGGCCGACCTGGACGCCGCGGTGCCGGTGCCGCACGACATCC CTTGGTTTCCCAAGGACCTGCAGGCCTGGTCGGTGCGCTGGGTGATCCTGCACGTCATCAACGAGCTGGCCCGGCACGCC GGGCACGCCGACATCATCCGGGAGACGATCGACGGCGCCACCATGTACGAGTTGATCGCCGCGCGGGAGGGCTGGGCCAT CGAGGGCTGGGTGCAGCCCTGGAAGGGCGGCGGCGATCGTCGCTAG
Upstream 100 bases:
>100_bases TGGCCCGACGAACAGCTCGGTCGAGAGCGCCGACGTTATTTCCATGCCGAAACCACCTGCATCCCCGCACTTTACGGCCC GCACGACCTAAGATCGACCG
Downstream 100 bases:
>100_bases CGGATTGGGACTCGCCAGCGCCGATTTGGCACACTGCACTGATGAGCTCTACCAAACATCGAGAGGTGGCCAAGCTCGAC CGGGTGCCGTTGCCGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MPALARPVADERSALCEFLAYHQSAYFAVSHGLTDGQARSAPSVSALSIGGLIKHATGMQRSWMARVAAAPGAPPKDTRP FEQVAAEFADQHVMRPDETLQELLDAFEAQNAESLRLAQTADLDAAVPVPHDIPWFPKDLQAWSVRWVILHVINELARHA GHADIIRETIDGATMYELIAAREGWAIEGWVQPWKGGGDRR
Sequences:
>Translated_201_residues MPALARPVADERSALCEFLAYHQSAYFAVSHGLTDGQARSAPSVSALSIGGLIKHATGMQRSWMARVAAAPGAPPKDTRP FEQVAAEFADQHVMRPDETLQELLDAFEAQNAESLRLAQTADLDAAVPVPHDIPWFPKDLQAWSVRWVILHVINELARHA GHADIIRETIDGATMYELIAAREGWAIEGWVQPWKGGGDRR >Mature_200_residues PALARPVADERSALCEFLAYHQSAYFAVSHGLTDGQARSAPSVSALSIGGLIKHATGMQRSWMARVAAAPGAPPKDTRPF EQVAAEFADQHVMRPDETLQELLDAFEAQNAESLRLAQTADLDAAVPVPHDIPWFPKDLQAWSVRWVILHVINELARHAG HADIIRETIDGATMYELIAAREGWAIEGWVQPWKGGGDRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007061 [H]
Pfam domain/function: PF04978 DUF664 [H]
EC number: NA
Molecular weight: Translated: 22065; Mature: 21934
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALARPVADERSALCEFLAYHQSAYFAVSHGLTDGQARSAPSVSALSIGGLIKHATGMQ CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCHH RSWMARVAAAPGAPPKDTRPFEQVAAEFADQHVMRPDETLQELLDAFEAQNAESLRLAQT HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHH ADLDAAVPVPHDIPWFPKDLQAWSVRWVILHVINELARHAGHADIIRETIDGATMYELIA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHH AREGWAIEGWVQPWKGGGDRR HCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure PALARPVADERSALCEFLAYHQSAYFAVSHGLTDGQARSAPSVSALSIGGLIKHATGMQ CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCHH RSWMARVAAAPGAPPKDTRPFEQVAAEFADQHVMRPDETLQELLDAFEAQNAESLRLAQT HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHH ADLDAAVPVPHDIPWFPKDLQAWSVRWVILHVINELARHAGHADIIRETIDGATMYELIA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHH AREGWAIEGWVQPWKGGGDRR HCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2575701; 12000953 [H]